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IVF0007746 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007746
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr09:8522529..8522741
RNA-Seq ExpressionIVF0007746
SyntenyIVF0007746
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040480.1 hypothetical protein E6C27_scaffold262G00150 [Cucumis melo var. makuwa]2.95e-3596.92Show/hide
Query:  MTDKGGLMMFHCDNTKTILKKTMKFGRMGKKTIHEVAMSKETSGTTMMIFEWVKLMEGKKHEEKF
        MTDKGGLMMFHCDNTKTILKKTMKFGRMGKKTIHEVAMSKETSGTTMMIFEWVKLMEGKKHEE +
Subjt:  MTDKGGLMMFHCDNTKTILKKTMKFGRMGKKTIHEVAMSKETSGTTMMIFEWVKLMEGKKHEEKF
KAA0051973.1 E3 ubiquitin-protein ligase SHPRH isoform X4 [Cucumis melo var. makuwa]2.34e-0655Show/hide
Query:  KGGLMMFHCDNTKTILKKTMKFGRMGKKTIHEVAMSKETSGTTMMIFEWVKLMEGKKHEE
        +G   MFH    K I KK MK     KKT  +VAMSK  SG TM   EW KL+EGKKHEE
Subjt:  KGGLMMFHCDNTKTILKKTMKFGRMGKKTIHEVAMSKETSGTTMMIFEWVKLMEGKKHEE
TrEMBL top hitse value%identityAlignment
A0A5A7U7S6 E3 ubiquitin-protein ligase SHPRH isoform X43.1e-0455Show/hide
Query:  KGGLMMFHCDNTKTILKKTMKFGRMGKKTIHEVAMSKETSGTTMMIFEWVKLMEGKKHEE
        +G   MFH    K I KK MK     KKT  +VAMSK  SG TM   EW KL+EGKKHEE
Subjt:  KGGLMMFHCDNTKTILKKTMKFGRMGKKTIHEVAMSKETSGTTMMIFEWVKLMEGKKHEE
A0A5D3DJB8 CCHC-type domain-containing protein6.9e-2896.92Show/hide
Query:  MTDKGGLMMFHCDNTKTILKKTMKFGRMGKKTIHEVAMSKETSGTTMMIFEWVKLMEGKKHEEKF
        MTDKGGLMMFHCDNTKTILKKTMKFGRMGKKTIHEVAMSKETSGTTMMIFEWVKLMEGKKHEE +
Subjt:  MTDKGGLMMFHCDNTKTILKKTMKFGRMGKKTIHEVAMSKETSGTTMMIFEWVKLMEGKKHEEKF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGACAAAGGAGGCCTAATGATGTTCCATTGCGATAATACGAAGACGATACTCAAGAAGACTATGAAGTTTGGTAGGATGGGCAAGAAGACGATTCATGAAGTGGC
GATGAGCAAGGAAACATCTGGAACAACAATGATGATATTTGAATGGGTCAAGCTTATGGAAGGCAAGAAACACGAAGAGAAGTTCATCATGACTACAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACCGACAAAGGAGGCCTAATGATGTTCCATTGCGATAATACGAAGACGATACTCAAGAAGACTATGAAGTTTGGTAGGATGGGCAAGAAGACGATTCATGAAGTGGC
GATGAGCAAGGAAACATCTGGAACAACAATGATGATATTTGAATGGGTCAAGCTTATGGAAGGCAAGAAACACGAAGAGAAGTTCATCATGACTACAAGATGA
Protein sequenceShow/hide protein sequence
MTDKGGLMMFHCDNTKTILKKTMKFGRMGKKTIHEVAMSKETSGTTMMIFEWVKLMEGKKHEEKFIMTTR