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IVF0007786 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007786
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr06:4627850..4628077
RNA-Seq ExpressionIVF0007786
SyntenyIVF0007786
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043083.1 uncharacterized protein E6C27_scaffold158G00210 [Cucumis melo var. makuwa]2.03e-2580Show/hide
Query:  MRVIQTQIHQEVEEDNIIRED----------MTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF
        ++VIQTQIHQEVEEDNIIR            MTKDRLNVIIVINSAI+LGNAEIELKKMQIMLRKMKKAVIPHCF
Subjt:  MRVIQTQIHQEVEEDNIIRED----------MTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF
KAA0058597.1 retrotransposon protein [Cucumis melo var. makuwa]2.08e-1574.14Show/hide
Query:  IHQEVEEDNIIREDMTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF
        I  +VE+D I+   MTKD LNVIIVIN AIILGNAEIE KKMQ ML+ MKKAVIPHCF
Subjt:  IHQEVEEDNIIREDMTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF
TYJ96705.1 UBN2 domain-containing protein [Cucumis melo var. makuwa]9.68e-0484.62Show/hide
Query:  GNAEIELKKMQIMLRKMKKAVIPHCF
         + EIELKKMQIMLRKMKK VIPHCF
Subjt:  GNAEIELKKMQIMLRKMKKAVIPHCF
XP_031737535.1 uncharacterized protein LOC105435097 [Cucumis sativus]1.59e-0894.44Show/hide
Query:  TKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKK
        TKDRLNVIIVIN AII GNAEIELKKMQIMLRKMKK
Subjt:  TKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKK
TrEMBL top hitse value%identityAlignment
A0A5A7TIB1 Uncharacterized protein2.2e-2080Show/hide
Query:  MRVIQTQIHQEVEEDNIIRED----------MTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF
        ++VIQTQIHQEVEEDNIIR            MTKDRLNVIIVINSAI+LGNAEIELKKMQIMLRKMKKAVIPHCF
Subjt:  MRVIQTQIHQEVEEDNIIRED----------MTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF
A0A5A7UV40 Retrotransposon protein1.9e-1174.14Show/hide
Query:  IHQEVEEDNIIREDMTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF
        I  +VE+D I+   MTKD LNVIIVIN AIILGNAEIE KKMQ ML+ MKKAVIPHCF
Subjt:  IHQEVEEDNIIREDMTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGAAGATATGACAAAAGACAGGTTGAATGTTATAATTGTCATAAATTCGGCCAT
TATTCTTGGGAATGCAGAAATAGAGTTGAAGAAAATGCAAATTATGCTGAGAAAGATGAAGAAAGCGGTGATTCCTCATTGTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGAAGATATGACAAAAGACAGGTTGAATGTTATAATTGTCATAAATTCGGCCAT
TATTCTTGGGAATGCAGAAATAGAGTTGAAGAAAATGCAAATTATGCTGAGAAAGATGAAGAAAGCGGTGATTCCTCATTGTTTCTAG
Protein sequenceShow/hide protein sequence
MRVIQTQIHQEVEEDNIIREDMTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKAVIPHCF