; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0007799 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007799
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr01:11638863..11639033
RNA-Seq ExpressionIVF0007799
SyntenyIVF0007799
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036983.1 retrotransposon protein [Cucumis melo var. makuwa]4.70e-1270.45Show/hide
Query:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAE
        MTNCDD +DVDE DS +  TT  EDIQYIET  +WSQW GELAE
Subjt:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAE
KAA0046996.1 retrotransposon protein [Cucumis melo var. makuwa]3.65e-1667.27Show/hide
Query:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAEQCSQNDSCVTL
        MTNCDD ++V+E DS +V TT AE IQYIET  EWSQW  ELAE   QNDSC+TL
Subjt:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAEQCSQNDSCVTL
KAA0048337.1 retrotransposon protein [Cucumis melo var. makuwa]3.02e-1170.45Show/hide
Query:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAE
        M NCDD +DVDE DS +V  T  EDIQYIET  EWSQWC ELAE
Subjt:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAE
KAA0048533.1 retrotransposon protein [Cucumis melo var. makuwa]6.13e-1168.18Show/hide
Query:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAE
        M NCDD +++DE DST+  TTT EDIQYIET  EWS WC ELAE
Subjt:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAE
KAA0049785.1 retrotransposon protein [Cucumis melo var. makuwa]1.22e-29100Show/hide
Query:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAEQCSQNDSC
        MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAEQCSQNDSC
Subjt:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAEQCSQNDSC
TrEMBL top hitse value%identityAlignment
A0A5A7U269 Retrotransposon protein6.3e-0870.45Show/hide
Query:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAE
        M NCDD +DVDE DS +V  T  EDIQYIET  EWSQWC ELAE
Subjt:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAE
A0A5D3C2X0 Retrotransposon protein1.0e-1067.27Show/hide
Query:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAEQCSQNDSCVTL
        MTNCDD ++V+E DS +V TT AE IQYIET  EWSQW  ELAE   QNDSC+TL
Subjt:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAEQCSQNDSCVTL
A0A5D3DCC0 Retrotransposon protein1.1e-0770.45Show/hide
Query:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAE
        MTNCDD +DVDE DS +  TT  EDIQYIET  +WSQW GELAE
Subjt:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAE
A0A5D3DHZ9 Retrotransposon protein7.7e-22100Show/hide
Query:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAEQCSQNDSC
        MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAEQCSQNDSC
Subjt:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAEQCSQNDSC
A0A5D3DX58 Retrotransposon protein6.3e-0868.18Show/hide
Query:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAE
        M NCDD +++DE DST+  TTT EDIQYIET  EWS WC ELAE
Subjt:  MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAATTGCGATGACAATAACGACGTGGACGAAAGGGACTCCACATTCGTGAGGACCACCACTGCAGAAGATATTCAGTACATTGAGACCATAAAAGAGTGGTCTCA
GTGGTGCGGTGAATTAGCTGAGCAATGTTCACAGAATGATAGTTGCGTAACGCTTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAATTGCGATGACAATAACGACGTGGACGAAAGGGACTCCACATTCGTGAGGACCACCACTGCAGAAGATATTCAGTACATTGAGACCATAAAAGAGTGGTCTCA
GTGGTGCGGTGAATTAGCTGAGCAATGTTCACAGAATGATAGTTGCGTAACGCTTAACTAA
Protein sequenceShow/hide protein sequence
MTNCDDNNDVDERDSTFVRTTTAEDIQYIETIKEWSQWCGELAEQCSQNDSCVTLN