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IVF0007815 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007815
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein, putative, Ty3-gypsy subclass
Genome locationchr09:439895..440068
RNA-Seq ExpressionIVF0007815
SyntenyIVF0007815
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038928.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]2.19e-0754.55Show/hide
Query:  MHKNVDGSGKDVGKSISDIEGNVEKTVGRNALGDLFPTRHQQSIGNNLLSTFSSP
        MHK VD SGKDVG  I D E +V  T+ RN   D FPT HQQ + N  L T S P
Subjt:  MHKNVDGSGKDVGKSISDIEGNVEKTVGRNALGDLFPTRHQQSIGNNLLSTFSSP

KAA0039107.1 hypothetical protein E6C27_scaffold84G002100 [Cucumis melo var. makuwa]5.51e-1362.26Show/hide
Query:  MHKNVDGSGKDVGKSISDIEGNVEKTVGRNALGDLFPTRHQQSIGNNLLSTFS
        MHKNV  SGKD+GK I ++E  + K VGRN LG+ FP  HQQ IGNNLL T S
Subjt:  MHKNVDGSGKDVGKSISDIEGNVEKTVGRNALGDLFPTRHQQSIGNNLLSTFS

TrEMBL top hitse value%identityAlignment
A0A5A7T7S7 Retrotransposon protein, putative, Ty3-gypsy subclass1.8e-0554.55Show/hide
Query:  MHKNVDGSGKDVGKSISDIEGNVEKTVGRNALGDLFPTRHQQSIGNNLLSTFSSP
        MHK VD SGKDVG  I D E +V  T+ RN   D FPT HQQ + N  L T S P
Subjt:  MHKNVDGSGKDVGKSISDIEGNVEKTVGRNALGDLFPTRHQQSIGNNLLSTFSSP

A0A5A7TBZ3 Uncharacterized protein5.8e-0962.26Show/hide
Query:  MHKNVDGSGKDVGKSISDIEGNVEKTVGRNALGDLFPTRHQQSIGNNLLSTFS
        MHKNV  SGKD+GK I ++E  + K VGRN LG+ FP  HQQ IGNNLL T S
Subjt:  MHKNVDGSGKDVGKSISDIEGNVEKTVGRNALGDLFPTRHQQSIGNNLLSTFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAAAAACGTCGATGGAAGTGGAAAAGACGTCGGGAAATCAATTTCCGACATAGAAGGGAACGTCGAAAAGACCGTCGGAAGAAACGCATTGGGAGACCTTTTCCC
GACGCGTCACCAACAAAGCATTGGGAATAACCTTCTCTCGACGTTTTCTTCACCAACAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCACAAAAACGTCGATGGAAGTGGAAAAGACGTCGGGAAATCAATTTCCGACATAGAAGGGAACGTCGAAAAGACCGTCGGAAGAAACGCATTGGGAGACCTTTTCCC
GACGCGTCACCAACAAAGCATTGGGAATAACCTTCTCTCGACGTTTTCTTCACCAACAAAGTAA
Protein sequenceShow/hide protein sequence
MHKNVDGSGKDVGKSISDIEGNVEKTVGRNALGDLFPTRHQQSIGNNLLSTFSSPTK