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IVF0007833 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007833
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLate embryogenesis abundant protein
Genome locationchr08:3947047..3947672
RNA-Seq ExpressionIVF0007833
SyntenyIVF0007833
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12837.1 Late embryogenesis abundant protein, LEA-18 [Cucumis melo var. makuwa]4.74e-54100Show/hide
Query:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP
        MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP
Subjt:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP

XP_011657884.1 uncharacterized protein LOC105435909 [Cucumis sativus]2.32e-3787.8Show/hide
Query:  MEKRQADQSQGQNEE-GKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAAS
        MEKR+ADQSQGQN+E  KSEREKERSE +PLESSPYVNY+DLEDYK+QAYGTQGHLQPKPGRGGGGG PTDAPTLSGDAAA+
Subjt:  MEKRQADQSQGQNEE-GKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAAS

XP_016899224.1 PREDICTED: uncharacterized protein LOC107990449 [Cucumis melo]2.26e-5297.78Show/hide
Query:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP
        MEKR+ADQSQGQNEE KSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP
Subjt:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP

XP_023003117.1 uncharacterized protein LOC111496824 [Cucurbita maxima]2.73e-3575.56Show/hide
Query:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP
        M+KR+ADQ + Q  E KSE ++ER EG+PLE+SPYVNYKDLEDYK+QAYG QGHL+PKP RGGGGGG TDAPTLSGDA  SSV NRQGVP
Subjt:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP

XP_038883215.1 uncharacterized protein LOC120074234 [Benincasa hispida]8.61e-4184.44Show/hide
Query:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP
        M+KR+ DQ Q Q EE KS RE+ERSEG+PLESSPYVNYKDLEDYK QAYGTQGHLQPKPGRG GGG PTDAPTLSGDAAASSV NRQGVP
Subjt:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP

TrEMBL top hitse value%identityAlignment
A0A0A0KGG1 Uncharacterized protein7.5e-2787.8Show/hide
Query:  MEKRQADQSQGQNEE-GKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAAS
        MEKR+ADQSQGQN+E  KSEREKERSE +PLESSPYVNY+DLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDAAA+
Subjt:  MEKRQADQSQGQNEE-GKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAAS

A0A1S4DTA9 uncharacterized protein LOC1079904492.5e-3897.78Show/hide
Query:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP
        MEKR+ADQSQGQNEE KSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP
Subjt:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP

A0A5D3CLL7 Late embryogenesis abundant protein, LEA-181.3e-39100Show/hide
Query:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP
        MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP
Subjt:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP

A0A6J1HDU8 uncharacterized protein LOC1114630782.1e-2172.22Show/hide
Query:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP
        M+KR+ADQ + Q  E KS  E+ER EG+PLE+SPYVNYKDLEDYK+QAYG QGHL+ KP R GGGG  TDAPTLSGD A SSV NRQGVP
Subjt:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP

A0A6J1KLI9 uncharacterized protein LOC1114968241.8e-2575.56Show/hide
Query:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP
        M+KR+ADQ + Q  E KSE ++ER EG+PLE+SPYVNYKDLEDYK+QAYG QGHL+PKP RGGGGGG TDAPTLSGD A SSV NRQGVP
Subjt:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 63.4e-0841.49Show/hide
Query:  QGQNEEGKSEREKERSEGLPLES--SPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSG-----------DAAASSVNNRQGVP
        + Q +   +E+E +  +   LES  +PY++Y +LEDYK + YG QGH +PK G GGG    TDAPT SG           D +++   NRQGVP
Subjt:  QGQNEEGKSEREKERSEGLPLES--SPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSG-----------DAAASSVNNRQGVP

AT2G23110.2 Late embryogenesis abundant protein, group 63.4e-0841.49Show/hide
Query:  QGQNEEGKSEREKERSEGLPLES--SPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSG-----------DAAASSVNNRQGVP
        + Q +   +E+E +  +   LES  +PY++Y +LEDYK + YG QGH +PK G GGG    TDAPT SG           D +++   NRQGVP
Subjt:  QGQNEEGKSEREKERSEGLPLES--SPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSG-----------DAAASSVNNRQGVP

AT2G23120.1 Late embryogenesis abundant protein, group 61.9e-0643.53Show/hide
Query:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNN
        ME  +   +     E K+E+ K+    LP + SPY+    LEDYK +AYG +GH +P PG GGG    TDAPT SGDA A++  +
Subjt:  MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNN

AT2G33690.1 Late embryogenesis abundant protein, group 61.6e-1356.92Show/hide
Query:  EKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNN
        + E  + LPLE+SPY  Y+D+EDYK  AYGT GH   KPG    GGG TDAPT SGDAA S++++
Subjt:  EKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGCGGCAGGCCGATCAGTCGCAGGGGCAAAACGAGGAGGGGAAAAGCGAAAGGGAAAAGGAGAGATCAGAGGGACTTCCGTTGGAGAGCAGTCCATACGTGAA
TTATAAAGACTTGGAAGATTACAAAAGCCAAGCCTACGGAACACAAGGCCATCTTCAGCCCAAGCCCGGCCGTGGCGGCGGCGGCGGTGGCCCAACCGACGCCCCCACTC
TCTCTGGCGACGCCGCCGCTTCCTCGGTGAATAACCGCCAAGGAGTACCCTGA
mRNA sequenceShow/hide mRNA sequence
TTGTGATCCAGAGAAAATGGAGAAGCGGCAGGCCGATCAGTCGCAGGGGCAAAACGAGGAGGGGAAAAGCGAAAGGGAAAAGGAGAGATCAGAGGGACTTCCGTTGGAGA
GCAGTCCATACGTGAATTATAAAGACTTGGAAGATTACAAAAGCCAAGCCTACGGAACACAAGGCCATCTTCAGCCCAAGCCCGGCCGTGGCGGCGGCGGCGGTGGCCCA
ACCGACGCCCCCACTCTCTCTGGCGACGCCGCCGCTTCCTCGGTGAATAACCGCCAAGGAGTACCCTGAGAAGACATTGCTTTCTTTTCCCGTTCTGTTTTCTTAAGGAA
TATTTATCGTGCTGCAGCTCAGTGAAGTTAATGTGTAATCTTGCAATGGGTAAGGTAGTGGATTAAAGCAGTTGGAATAATCGGAATGCTTTTTTTATATGAAATGTTAG
ACATTTTAACACTCAAGAAGTTGTTTTTTTGCTTTAATGCATTTTGCTAAAAAAAAAATTATTTTGATGGTTTTTTTTAGTACATATAGGTGATGTAAAAGTGAATTTGT
TCATCTAAAAATGGGAACAAAACAATTAATTTTTTTTTGGTAATATCTATATAAATTAATGAATAATGAGTAATTA
Protein sequenceShow/hide protein sequence
MEKRQADQSQGQNEEGKSEREKERSEGLPLESSPYVNYKDLEDYKSQAYGTQGHLQPKPGRGGGGGGPTDAPTLSGDAAASSVNNRQGVP