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IVF0007838 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007838
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCytochrome b6-F complex subunit 5
Genome locationtig00000662:86960..87360
RNA-Seq ExpressionIVF0007838
SyntenyIVF0007838
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0017004 - cytochrome complex assembly (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0009512 - cytochrome b6f complex (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0045158 - electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity (molecular function)
InterPro domainsIPR003683 - Cytochrome b6/f complex, subunit 5
IPR007802 - Cytochrome b6-f complex subunit 6
IPR036099 - Cytochrome b6/f complex, subunit 5 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3441743.1 cytochrome b6-F complex subunit 5 [Gossypium australe]1.09e-1967.5Show/hide
Query:  MPTITSYFGFLLAVLTITSALFI-----------------------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
        M TITSYFGFLLA LTIT ALFI                       VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
Subjt:  MPTITSYFGFLLAVLTITSALFI-----------------------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL

KAF1855872.1 hypothetical protein Lal_00028291 [Lupinus albus]7.65e-2060.22Show/hide
Query:  MPTITSYFGFLLAVLTITSALFI------------------------------------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
        MPTITSYFGFLLA LTITSALFI                                    VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
Subjt:  MPTITSYFGFLLAVLTITSALFI------------------------------------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL

KAF1876954.1 hypothetical protein Lal_00033879 [Lupinus albus]1.52e-1870.27Show/hide
Query:  MPTITSYFGFLLAVLTITSALFI-------------------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQL
        MPTITSYFGFLLA LTI SALFI                   VFLFGIVLGLI ITLAGLFVTAYLQYRRGDQL
Subjt:  MPTITSYFGFLLAVLTITSALFI-------------------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQL

MQL82473.1 hypothetical protein [Colocasia esculenta]3.82e-1980.33Show/hide
Query:  MPTITSYFGFLLAVLTITSALFI------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQL
        MPTITSYFGFLLA  TIT AL I      V LFGI+LGLIPITLAGLFVTAYLQYRRGDQL
Subjt:  MPTITSYFGFLLAVLTITSALFI------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQL

RWR97765.1 cytochrome b6-F complex subunit 5 [Cinnamomum micranthum f. kanehirae]8.13e-2182.54Show/hide
Query:  MPTITSYFGFLLAVLTITSALFI------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
        M TITSYFGFLLA  TIT AL I      VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
Subjt:  MPTITSYFGFLLAVLTITSALFI------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL

TrEMBL top hitse value%identityAlignment
A0A0A0KT11 Uncharacterized protein5.2e-1898.25Show/hide
Query:  MPTITSYFGFLLAVLTITSALFIVFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
        M TITSYFGFLLAVLTITSALFIVFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
Subjt:  MPTITSYFGFLLAVLTITSALFIVFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL

A0A3S3NMV2 Cytochrome b6-F complex subunit 57.8e-1482.54Show/hide
Query:  MPTITSYFGFLLAVLTITSALFI------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
        M TITSYFGFLLA  TIT AL I      VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
Subjt:  MPTITSYFGFLLAVLTITSALFI------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL

A0A5B6TKA9 Cytochrome b6-f complex subunit 65.1e-1367.5Show/hide
Query:  MPTITSYFGFLLAVLTITSALFI-----------------------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
        M TITSYFGFLLA LTIT ALFI                       VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
Subjt:  MPTITSYFGFLLAVLTITSALFI-----------------------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL

A0A6A5LB28 Cytochrome b6-f complex subunit 63.0e-1360.22Show/hide
Query:  MPTITSYFGFLLAVLTITSALFI------------------------------------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
        MPTITSYFGFLLA LTITSALFI                                    VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
Subjt:  MPTITSYFGFLLAVLTITSALFI------------------------------------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL

A0A6A5MQ83 Cytochrome b6-f complex subunit 61.5e-1270.27Show/hide
Query:  MPTITSYFGFLLAVLTITSALFI-------------------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQL
        MPTITSYFGFLLA LTI SALFI                   VFLFGIVLGLI ITLAGLFVTAYLQYRRGDQL
Subjt:  MPTITSYFGFLLAVLTITSALFI-------------------VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQL

SwissProt top hitse value%identityAlignment
A1EA27 Cytochrome b6-f complex subunit 51.3e-10100Show/hide
Query:  VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
        VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
Subjt:  VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL

P69453 Cytochrome b6-f complex subunit 51.3e-10100Show/hide
Query:  VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
        VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
Subjt:  VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL

Q3V516 Cytochrome b6-f complex subunit 51.3e-10100Show/hide
Query:  VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
        VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
Subjt:  VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL

Q5QA79 Cytochrome b6-f complex subunit 51.3e-10100Show/hide
Query:  VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
        VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
Subjt:  VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL

Q7FNS7 Cytochrome b6-f complex subunit 51.3e-10100Show/hide
Query:  VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
        VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
Subjt:  VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL

Arabidopsis top hitse value%identityAlignment
ATCG00600.1 PETG2.8e-11100Show/hide
Query:  VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLD
        VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLD
Subjt:  VFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTACTATCACTAGTTATTTCGGTTTTCTACTAGCAGTTTTAACTATAACCTCAGCTCTATTTATCGTTTTTCTATTTGGAATCGTATTAGGTCTAATTCCTATTAC
TTTGGCTGGATTATTTGTGACCGCATATTTACAATACAGACGGGGGGATCAGTTGGACCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTACTATCACTAGTTATTTCGGTTTTCTACTAGCAGTTTTAACTATAACCTCAGCTCTATTTATCGTTTTTCTATTTGGAATCGTATTAGGTCTAATTCCTATTAC
TTTGGCTGGATTATTTGTGACCGCATATTTACAATACAGACGGGGGGATCAGTTGGACCTTTGA
Protein sequenceShow/hide protein sequence
MPTITSYFGFLLAVLTITSALFIVFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL