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IVF0007856 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007856
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionInactive rhomboid protein
Genome locationchr09:11139478..11140796
RNA-Seq ExpressionIVF0007856
SyntenyIVF0007856
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041390.1 putative Golgin subfamily A member 4 [Cucumis melo var. makuwa]1.28e-11592.93Show/hide
Query:  DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAV
        DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPR PIP  RRLSWVSLQGRLVNAEQASSVRSIG GFGP +AIAWQLFSPIE FLIVAVIGVAV
Subjt:  DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAV

Query:  SESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFVNCGCWLCDEHLDLLSRLD
        SESKSNH+I QLK+AVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALR NADFGNDKIKFV+CGCWLCDEHLDLLSRL+
Subjt:  SESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFVNCGCWLCDEHLDLLSRLD

KAA0047492.1 putative Golgin subfamily A member 4 [Cucumis melo var. makuwa]1.09e-11699.41Show/hide
Query:  MPYDDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIG
        MPYDDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIG
Subjt:  MPYDDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIG

Query:  VAVSESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFV
        VAVSESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKF+
Subjt:  VAVSESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFV

TYJ96157.1 putative Golgin subfamily A member 4 [Cucumis melo var. makuwa]1.82e-11592.93Show/hide
Query:  DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAV
        DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPR PIP  RRLSWVSLQGRLVNAEQASSVRSIG GFGP +AIAWQLFSPIE FLIVAVIGVAV
Subjt:  DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAV

Query:  SESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFVNCGCWLCDEHLDLLSRLD
        SESKSNHQI QLK+AVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTE+DMALR NADFGNDKIKFV+CGCWLCDEHLDLLSRL+
Subjt:  SESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFVNCGCWLCDEHLDLLSRLD

XP_008449739.1 PREDICTED: uncharacterized protein LOC103491531 [Cucumis melo]1.28e-11592.93Show/hide
Query:  DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAV
        DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPR PIP  RRLSWVSLQGRLVNAEQASSVRSIG GFGP +AIAWQLFSPIE FLIVAVIGVAV
Subjt:  DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAV

Query:  SESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFVNCGCWLCDEHLDLLSRLD
        SESKSNH+I QLK+AVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALR NADFGNDKIKFV+CGCWLCDEHLDLLSRL+
Subjt:  SESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFVNCGCWLCDEHLDLLSRLD

XP_008465843.1 PREDICTED: uncharacterized protein LOC103503437 [Cucumis melo]2.61e-11497.63Show/hide
Query:  MPYDDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIG
        MPYDDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIV VIG
Subjt:  MPYDDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIG

Query:  VAVSESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFV
        VAVSESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQS TENDM LRMNADFGNDKIKF+
Subjt:  VAVSESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFV

TrEMBL top hitse value%identityAlignment
A0A0A0L0N0 Uncharacterized protein4.4e-8888.42Show/hide
Query:  DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAV
        DDHHNQEN FQSFPN+VSFASPLHTPSHRRLSSNFTQPR PIP  RRLSWVSLQGRLVNA+QASSV SIGGGFGP +AIAWQLFSPIE FLIVAVIGVAV
Subjt:  DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAV

Query:  SESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNAD------FGNDKIKFVNCGCWLCDEHLDLLSRLD
        SESKSNHQIGQLK+AVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMAL+ NAD      FGNDKIKF +CGCWLCDEHLDLLSRL+
Subjt:  SESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNAD------FGNDKIKFVNCGCWLCDEHLDLLSRLD

A0A1S3BMQ0 uncharacterized protein LOC1034915311.5e-9192.93Show/hide
Query:  DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAV
        DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPR PIP  RRLSWVSLQGRLVNAEQASSVRSIG GFGP +AIAWQLFSPIE FLIVAVIGVAV
Subjt:  DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAV

Query:  SESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFVNCGCWLCDEHLDLLSRLD
        SESKSNH+I QLK+AVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALR NADFGNDKIKFV+CGCWLCDEHLDLLSRL+
Subjt:  SESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFVNCGCWLCDEHLDLLSRLD

A0A5A7TDL7 Putative Golgin subfamily A member 41.5e-9192.93Show/hide
Query:  DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAV
        DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPR PIP  RRLSWVSLQGRLVNAEQASSVRSIG GFGP +AIAWQLFSPIE FLIVAVIGVAV
Subjt:  DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAV

Query:  SESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFVNCGCWLCDEHLDLLSRLD
        SESKSNH+I QLK+AVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALR NADFGNDKIKFV+CGCWLCDEHLDLLSRL+
Subjt:  SESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFVNCGCWLCDEHLDLLSRLD

A0A5A7TVK5 Putative Golgin subfamily A member 46.1e-9099.41Show/hide
Query:  MPYDDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIG
        MPYDDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIG
Subjt:  MPYDDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIG

Query:  VAVSESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFV
        VAVSESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKF+
Subjt:  VAVSESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFV

A0A5D3BAL2 Putative Golgin subfamily A member 41.9e-9192.93Show/hide
Query:  DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAV
        DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPR PIP  RRLSWVSLQGRLVNAEQASSVRSIG GFGP +AIAWQLFSPIE FLIVAVIGVAV
Subjt:  DDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAV

Query:  SESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFVNCGCWLCDEHLDLLSRLD
        SESKSNHQI QLK+AVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTE+DMALR NADFGNDKIKFV+CGCWLCDEHLDLLSRL+
Subjt:  SESKSNHQIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFVNCGCWLCDEHLDLLSRLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G12930.1 unknown protein3.0e-4148.52Show/hide
Query:  PNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAVSESKSNHQIGQLK
        P+     +P  +P  RRLS++FT+   P+     L+++SLQG LVN+++ASS RSIGGG    +++AW+LF+P + FL+VAVIGVA ++SK N  I QL+
Subjt:  PNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAVSESKSNHQIGQLK

Query:  QAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMA------LRMNADFGNDKIKFVNCGCWLCDEH
        ++V+LRDQ+L SMQQKLDDLC+++N  KDQSG  + ++        +   FG+++I FV+CGCWLCD+H
Subjt:  QAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMA------LRMNADFGNDKIKFVNCGCWLCDEH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTACGACGATCACCATAACCAAGAAAACATTTTTCAATCTTTCCCTAATGTCGTCTCTTTCGCATCCCCTCTTCATACTCCTTCCCACCGCCGTCTCTCCAGTAA
CTTCACTCAACCCAGGCTCCCGATCCCCTTCGTTAGACGCCTCTCTTGGGTTTCTCTTCAGGGGAGGCTCGTTAACGCTGAACAAGCCAGCTCCGTCCGATCTATTGGAG
GCGGCTTTGGCCCTGGCAAAGCCATTGCTTGGCAGTTGTTCAGCCCCATTGAATGGTTTCTTATAGTTGCCGTCATTGGCGTCGCGGTTTCTGAGTCCAAAAGCAACCAT
CAGATCGGCCAGCTTAAACAAGCTGTTGAACTTAGGGATCAAGTGCTTCTAAGCATGCAACAGAAGCTTGATGATCTATGTAATCAAGTGAATCCTGTTAAGGATCAATC
TGGAACTGAAAATGACATGGCTTTGAGAATGAATGCTGACTTTGGGAATGATAAAATTAAGTTTGTTAATTGTGGGTGTTGGCTTTGCGATGAGCATCTGGATTTACTCA
GTCGTTTGGACGTACAAACACTCAATTCTTTATTGTCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
CTCACATATCTCACGCCTCCATCTCCAATCTCACTGTGCTCTCTGACTGCAACACGCTGTTGCTCCTCCGCTCATGCCGTACGACGATCACCATAACCAAGAAAACATTT
TTCAATCTTTCCCTAATGTCGTCTCTTTCGCATCCCCTCTTCATACTCCTTCCCACCGCCGTCTCTCCAGTAACTTCACTCAACCCAGGCTCCCGATCCCCTTCGTTAGA
CGCCTCTCTTGGGTTTCTCTTCAGGGGAGGCTCGTTAACGCTGAACAAGCCAGCTCCGTCCGATCTATTGGAGGCGGCTTTGGCCCTGGCAAAGCCATTGCTTGGCAGTT
GTTCAGCCCCATTGAATGGTTTCTTATAGTTGCCGTCATTGGCGTCGCGGTTTCTGAGTCCAAAAGCAACCATCAGATCGGCCAGCTTAAACAAGCTGTTGAACTTAGGG
ATCAAGTGCTTCTAAGCATGCAACAGAAGCTTGATGATCTATGTAATCAAGTGAATCCTGTTAAGGATCAATCTGGAACTGAAAATGACATGGCTTTGAGAATGAATGCT
GACTTTGGGAATGATAAAATTAAGTTTGTTAATTGTGGGTGTTGGCTTTGCGATGAGCATCTGGATTTACTCAGTCGTTTGGACGTACAAACACTCAATTCTTTATTGTC
TCTTTGAAATTTATGAACTCACAATCACAATACCCATTTTTGTAATACTAAACTATCCACTCCTCTGCTGTTGTTATATACATATTTTGAGATGGTAAAGGTAATAATGT
TGCAATACTTTAGAAGCCCAATTTGAGTTAACCTACTGCTTTCATACATTCAAATTTCAGATTTCTC
Protein sequenceShow/hide protein sequence
MPYDDHHNQENIFQSFPNVVSFASPLHTPSHRRLSSNFTQPRLPIPFVRRLSWVSLQGRLVNAEQASSVRSIGGGFGPGKAIAWQLFSPIEWFLIVAVIGVAVSESKSNH
QIGQLKQAVELRDQVLLSMQQKLDDLCNQVNPVKDQSGTENDMALRMNADFGNDKIKFVNCGCWLCDEHLDLLSRLDVQTLNSLLSL