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IVF0007882 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007882
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRT_RNaseH domain-containing protein
Genome locationchr09:12325636..12326633
RNA-Seq ExpressionIVF0007882
SyntenyIVF0007882
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038053.1 uncharacterized protein E6C27_scaffold36G002560 [Cucumis melo var. makuwa]5.69e-5459.67Show/hide
Query:  MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI
        M SYVKFL DILAKK R+ND +T+AL Q T D+F+NGV  KM DP SF+I  SIG MDLG  L DL+ASIN M L IF KLE+ E  PT      A  S+
Subjt:  MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI

Query:  TKPKDAIEDILAKEEVFVELFSPEEFFEEEDSDYILEEVNVVYGARKFEPLDLQTKGKKKIKPLIKKPRELELKSLPNHLK
                    +EEV+ ELF+ EEFFEEED  YIL+EVN+V G R FE LDLQTKGKKK KP I++P +LELK LPNHLK
Subjt:  TKPKDAIEDILAKEEVFVELFSPEEFFEEEDSDYILEEVNVVYGARKFEPLDLQTKGKKKIKPLIKKPRELELKSLPNHLK

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]8.88e-5559.3Show/hide
Query:  TSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSITKPKDAIEDILA----------------K
        TSD+F+NG+P KMT+P SF + CSIG MDLG  L +L  SINLM L IFKKLE+ EVQPTH+RL FAD+ I KP+D I+D                   +
Subjt:  TSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSITKPKDAIEDILA----------------K

Query:  EEVFVELFSPEEFFEEEDSDYILEEVNVVYGARKFEPLDLQTKGKKKIKPLIKKPRELELKSLPNHLKYAYL
        +E + ELFS EEFFEE+D  YIL+EVNVV   +KFE LDLQ KG+KK KP I++P ELELKSLPNHLKY YL
Subjt:  EEVFVELFSPEEFFEEEDSDYILEEVNVVYGARKFEPLDLQTKGKKKIKPLIKKPRELELKSLPNHLKYAYL

KAA0062402.1 uncharacterized protein E6C27_scaffold154G001950 [Cucumis melo var. makuwa]5.69e-7396.61Show/hide
Query:  MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI
        MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI
Subjt:  MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI

Query:  TKPKDAIEDILAKEEVFV
        TKPKDAIEDILAK + F+
Subjt:  TKPKDAIEDILAKEEVFV

TYJ99425.1 uncharacterized protein E5676_scaffold316G00120 [Cucumis melo var. makuwa]4.65e-6663.19Show/hide
Query:  VKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSITKPK
        VKFLKDIL KK ++NDF+ VAL Q T+++F+NGVP+KMTDP SF I  SIG +DLG  L +L A++NL+PL IFKKL++GEVQPTHMRLQ  D       
Subjt:  VKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSITKPK

Query:  DAIEDILAKEEVFVELFSPEEFFEEEDSDYILEEVNVVYGARKFEPLDLQTKGKKKIKPLIKKPRELELKSLPNHLKYAYLG
                 EE + ELFS EEF EE++ DY LEEVN  +G RKFEPLDLQTK +KKIKP IK+P ELELK LPNHLKYAYLG
Subjt:  DAIEDILAKEEVFVELFSPEEFFEEEDSDYILEEVNVVYGARKFEPLDLQTKGKKKIKPLIKKPRELELKSLPNHLKYAYLG

XP_016902557.1 PREDICTED: uncharacterized protein LOC107991723 [Cucumis melo]6.95e-7294.92Show/hide
Query:  MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI
        MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDL ASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI
Subjt:  MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI

Query:  TKPKDAIEDILAKEEVFV
        TKPKD IEDILAK + F+
Subjt:  TKPKDAIEDILAKEEVFV

TrEMBL top hitse value%identityAlignment
A0A1S4E2V6 uncharacterized protein LOC1079917236.0e-5694.17Show/hide
Query:  MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI
        MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDL ASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI
Subjt:  MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI

Query:  TKPKDAIEDILAKEEVFVEL
        TKPKD IEDILAK + F+ L
Subjt:  TKPKDAIEDILAKEEVFVEL

A0A5A7T4Y2 Uncharacterized protein2.6e-4359.12Show/hide
Query:  MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI
        M SYVKFL DILAKK R+ND +T+AL Q T D+F+NGV  KM DP SF+I  SIG MDLG  L DL+ASIN M L IF KLE+ E  PT       D   
Subjt:  MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI

Query:  TKPKDAIEDILAKEEVFVELFSPEEFFEEEDSDYILEEVNVVYGARKFEPLDLQTKGKKKIKPLIKKPRELELKSLPNHLK
            +++     +EEV+ ELF+ EEFFEEED  YIL+EVN+V G R FE LDLQTKGKKK KP I++P +LELK LPNHLK
Subjt:  TKPKDAIEDILAKEEVFVELFSPEEFFEEEDSDYILEEVNVVYGARKFEPLDLQTKGKKKIKPLIKKPRELELKSLPNHLK

A0A5A7UF79 Uncharacterized protein1.1e-4459.3Show/hide
Query:  TSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSITKPKDAIEDI----------------LAK
        TSD+F+NG+P KMT+P SF + CSIG MDLG  L +L  SINLM L IFKKLE+ EVQPTH+RL FAD+ I KP+D I+D                   +
Subjt:  TSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSITKPKDAIEDI----------------LAK

Query:  EEVFVELFSPEEFFEEEDSDYILEEVNVVYGARKFEPLDLQTKGKKKIKPLIKKPRELELKSLPNHLKYAYL
        +E + ELFS EEFFEE+D  YIL+EVNVV   +KFE LDLQ KG+KK KP I++P ELELKSLPNHLKY YL
Subjt:  EEVFVELFSPEEFFEEEDSDYILEEVNVVYGARKFEPLDLQTKGKKKIKPLIKKPRELELKSLPNHLKYAYL

A0A5A7V2G5 Uncharacterized protein3.2e-5795.83Show/hide
Query:  MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI
        MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI
Subjt:  MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSI

Query:  TKPKDAIEDILAKEEVFVEL
        TKPKDAIEDILAK + F+ L
Subjt:  TKPKDAIEDILAKEEVFVEL

A0A5D3BM69 Uncharacterized protein2.8e-5363.19Show/hide
Query:  VKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSITKPK
        VKFLKDIL KK ++NDF+ VAL Q T+++F+NGVP+KMTDP SF I  SIG +DLG  L +L A++NL+PL IFKKL++GEVQPTHMRLQ  D       
Subjt:  VKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSITKPK

Query:  DAIEDILAKEEVFVELFSPEEFFEEEDSDYILEEVNVVYGARKFEPLDLQTKGKKKIKPLIKKPRELELKSLPNHLKYAYLG
                 EE + ELFS EEF EE++ DY LEEVN  +G RKFEPLDLQTK +KKIKP IK+P ELELK LPNHLKYAYLG
Subjt:  DAIEDILAKEEVFVELFSPEEFFEEEDSDYILEEVNVVYGARKFEPLDLQTKGKKKIKPLIKKPRELELKSLPNHLKYAYLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCTTATGTGAAATTCTTGAAGGATATCTTGGCGAAGAAAAGTAGGTTAAATGATTTTCAAACGGTAGCTCTAATGCAAGAAACAAGTGACGTCTTCAGGAATGG
GGTACCCAGGAAGATGACAGATCCTAGAAGCTTTATGATACTATGCTCAATAGGCTGGATGGATCTGGGTTGCGTACTATATGACCTTGAAGCAAGTATCAATTTGATGC
CTCTTTATATCTTCAAGAAATTAGAGATGGGGGAGGTTCAACCCACACACATGAGACTTCAATTTGCTGATAGATCCATCACAAAGCCTAAAGACGCGATTGAAGACATT
TTGGCGAAGGAAGAAGTGTTTGTCGAACTGTTTAGCCCTGAAGAATTCTTTGAAGAAGAAGACTCCGATTATATATTGGAAGAAGTAAACGTTGTATATGGCGCAAGGAA
GTTCGAACCTTTGGATCTGCAAACCAAAGGCAAAAAGAAGATTAAGCCATTAATTAAAAAACCACGAGAATTAGAGCTCAAGTCGTTGCCCAACCACCTGAAGTATGCAT
ACTTGGGGAGAATGAAACTCGTCTTTTGGAAGAGGGTTATAAGGGCACTATTCAGTTTCAGTGGCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCTTATGTGAAATTCTTGAAGGATATCTTGGCGAAGAAAAGTAGGTTAAATGATTTTCAAACGGTAGCTCTAATGCAAGAAACAAGTGACGTCTTCAGGAATGG
GGTACCCAGGAAGATGACAGATCCTAGAAGCTTTATGATACTATGCTCAATAGGCTGGATGGATCTGGGTTGCGTACTATATGACCTTGAAGCAAGTATCAATTTGATGC
CTCTTTATATCTTCAAGAAATTAGAGATGGGGGAGGTTCAACCCACACACATGAGACTTCAATTTGCTGATAGATCCATCACAAAGCCTAAAGACGCGATTGAAGACATT
TTGGCGAAGGAAGAAGTGTTTGTCGAACTGTTTAGCCCTGAAGAATTCTTTGAAGAAGAAGACTCCGATTATATATTGGAAGAAGTAAACGTTGTATATGGCGCAAGGAA
GTTCGAACCTTTGGATCTGCAAACCAAAGGCAAAAAGAAGATTAAGCCATTAATTAAAAAACCACGAGAATTAGAGCTCAAGTCGTTGCCCAACCACCTGAAGTATGCAT
ACTTGGGGAGAATGAAACTCGTCTTTTGGAAGAGGGTTATAAGGGCACTATTCAGTTTCAGTGGCGATTGA
Protein sequenceShow/hide protein sequence
MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLGCVLYDLEASINLMPLYIFKKLEMGEVQPTHMRLQFADRSITKPKDAIEDI
LAKEEVFVELFSPEEFFEEEDSDYILEEVNVVYGARKFEPLDLQTKGKKKIKPLIKKPRELELKSLPNHLKYAYLGRMKLVFWKRVIRALFSFSGD