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IVF0007920 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007920
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr07:6438813..6439130
RNA-Seq ExpressionIVF0007920
SyntenyIVF0007920
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050217.1 retrotransposon protein [Cucumis melo var. makuwa]2.21e-3567.74Show/hide
Query:  AKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRA-RSSESKRQ
         KGL NKLFPYYDE AYVFERDR TGHF +TFVDV SN+P GYEGF +P+GNDM+FLSMY+QG DMS +DV AL P     GR  R+  SKR+
Subjt:  AKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRA-RSSESKRQ

KAA0050806.1 retrotransposon protein [Cucumis melo var. makuwa]2.23e-3565.66Show/hide
Query:  MQTRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQR
        MQ+  TAKGLLNK FPYYDE AY+F+RDRTT  F +TF D+GSN+P  YEGF M DGN+ EF S+Y+QG DMSQ+DV A  PAHT   RARSS  KR+R
Subjt:  MQTRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQR

KAA0052215.1 transposase [Cucumis melo var. makuwa]8.56e-6597.09Show/hide
Query:  TRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQRRRA
        T  +AKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQRRRA
Subjt:  TRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQRRRA

Query:  AGG
        AGG
Subjt:  AGG

KAA0067019.1 retrotransposon protein [Cucumis melo var. makuwa]1.57e-3770.71Show/hide
Query:  MQTRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQR
        MQT   AKGLLNK F YYDE AYVF RDR  GHF +TF+DVGSNDPS YEGFQ  DGND EF SMY+QGFDMSQDDVRA  PA T E R  S+ SK++R
Subjt:  MQTRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQR

TYK20513.1 retrotransposon protein [Cucumis melo var. makuwa]1.40e-3565.66Show/hide
Query:  MQTRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQR
        +++    K L NKLFPYYDE AYVF+ D+TTG F KTFVDVGSN+P+ Y+GF M DGN+ EFLS+YNQG DMSQ DVRAL PAHT +GR   S SKR+R
Subjt:  MQTRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQR

TrEMBL top hitse value%identityAlignment
A0A5A7U9D5 Retrotransposon protein3.0e-2765.66Show/hide
Query:  MQTRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQR
        MQ+  TAKGLLNK FPYYDE AY+F+RDRTT  F +TF D+GSN+P  YEGF M DGN+ EF S+Y+QG DMSQ+DV A  PAHT   RARSS  KR+R
Subjt:  MQTRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQR

A0A5A7UET5 Transposase4.8e-4997.09Show/hide
Query:  TRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQRRRA
        T  +AKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQRRRA
Subjt:  TRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQRRRA

Query:  AGG
        AGG
Subjt:  AGG

A0A5D3BQI7 Retrotransposon protein2.1e-2865.66Show/hide
Query:  MQTRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQR
        +++   AK LLNKLF YYDE AYVFE DR TG F +TF D+GSN+P+GYEGF M DGND+EF  MY+QG D+SQDDVR   PA T +GR RSSESKR+R
Subjt:  MQTRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQR

A0A5D3DAC5 Retrotransposon protein1.3e-2765.66Show/hide
Query:  MQTRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQR
        +++    K L NKLFPYYDE AYVF+ D+TTG F KTFVDVGSN+P+ Y+GF M DGN+ EFLS+YNQG DMSQ DVRAL PAHT +GR   S SKR+R
Subjt:  MQTRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQR

A0A5D3DS68 Retrotransposon protein2.5e-2970.71Show/hide
Query:  MQTRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQR
        MQT   AKGLLNK F YYDE AYVF RDR  GHF +TF+DVGSNDPS YEGFQ  DGND EF SMY+QGFDMSQDDVRA  PA T E R  S+ SK++R
Subjt:  MQTRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGACACGTCATACAGCGAAGGGGCTCCTTAACAAACTGTTTCCCTATTACGACGAATTTGCATATGTGTTCGAGAGGGATAGGACGACGGGTCACTTTACAAAGAC
GTTCGTCGATGTTGGGTCTAATGATCCTAGCGGGTACGAGGGGTTTCAAATGCCTGATGGAAATGATATGGAATTTCTCAGCATGTATAACCAAGGGTTTGACATGTCTC
AGGATGATGTACGTGCTTTACTCCCTGCTCACACGTTAGAGGGTCGGGCCAGATCGAGTGAATCAAAACGACAGAGAAGGAGGGCAGCAGGTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGACACGTCATACAGCGAAGGGGCTCCTTAACAAACTGTTTCCCTATTACGACGAATTTGCATATGTGTTCGAGAGGGATAGGACGACGGGTCACTTTACAAAGAC
GTTCGTCGATGTTGGGTCTAATGATCCTAGCGGGTACGAGGGGTTTCAAATGCCTGATGGAAATGATATGGAATTTCTCAGCATGTATAACCAAGGGTTTGACATGTCTC
AGGATGATGTACGTGCTTTACTCCCTGCTCACACGTTAGAGGGTCGGGCCAGATCGAGTGAATCAAAACGACAGAGAAGGAGGGCAGCAGGTGGGTGA
Protein sequenceShow/hide protein sequence
MQTRHTAKGLLNKLFPYYDEFAYVFERDRTTGHFTKTFVDVGSNDPSGYEGFQMPDGNDMEFLSMYNQGFDMSQDDVRALLPAHTLEGRARSSESKRQRRRAAGG