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IVF0007995 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0007995
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGTPase IMAP family member 1, putative
Genome locationchr12:24904291..24904773
RNA-Seq ExpressionIVF0007995
SyntenyIVF0007995
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]1.59e-3065.98Show/hide
Query:  RGGMTMAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKTVSKILYCVGGFLGFTAFFLATAIPY
        R    +AAEMVEEWK+MI+  CVSSAIGIATVSV I+T   LP +FQ LSIAVLLCF  V FA+M   IF+T+SKILYCVGG L  ++ F+ATAIPY
Subjt:  RGGMTMAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKTVSKILYCVGGFLGFTAFFLATAIPY

KAE8652532.1 hypothetical protein Csa_023780, partial [Cucumis sativus]2.07e-1683.33Show/hide
Query:  LWESLKGEE-----SGRGG--MTMAAEMVEEWKEMIVALCVSSAIGIATVSVQI
        LWESLKGEE     SGRGG  +TMAAEMVEEWKEMIVALCVSSA+GIATVSVQI
Subjt:  LWESLKGEE-----SGRGG--MTMAAEMVEEWKEMIVALCVSSAIGIATVSVQI

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]6.48e-5463.75Show/hide
Query:  WVENCIRKACRLWESLKGEESGRGG------MTMAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKT
        W ENCI KA RLWE   G E G GG         AAEMVEEWK+MIVA CVSSAI IATVSVQIE  K+LP+ F FLS+ +LLCFGFV F KMTK I K 
Subjt:  WVENCIRKACRLWESLKGEESGRGG------MTMAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKT

Query:  VSKILYCVGGFLGFTAFFLATAIPYAPYFQIIIFILYLIFCFIFMLITTIHNQQPSSTTP
        VS+ILYCVGG LG TA F+A+AIPYA YFQIIIF++YLIF  +FML+      + SS+ P
Subjt:  VSKILYCVGGFLGFTAFFLATAIPYAPYFQIIIFILYLIFCFIFMLITTIHNQQPSSTTP

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]8.00e-2153.21Show/hide
Query:  AAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKTVSKILYCVGGFLGFTAFFLATAIPYAPYFQIIIF
        A EM+ +W+ M+V  C+ +AI IATVSVQI+T  +L   FQFLS A++ CF F   AK+ K   + VS ILY +GGF   TAFF+A AIPYA +FQI+  
Subjt:  AAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKTVSKILYCVGGFLGFTAFFLATAIPYAPYFQIIIF

Query:  ILYLIFCFI
         LYL+F FI
Subjt:  ILYLIFCFI

KGN60003.2 hypothetical protein Csa_000735, partial [Cucumis sativus]1.63e-2166.23Show/hide
Query:  RGGMTMAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKTVSKIL
        R  + + AEMVEE KEMI+  C+SSAIGIATVSVQ  T  +LP +FQFLSIAVL+CF  VGFA+M   IFKT+SKIL
Subjt:  RGGMTMAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKTVSKIL

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein2.6e-3062.77Show/hide
Query:  RGGMTMAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKTVSKILYCVGGFLGFTAFFLATAIPYAPY
        R  + + AEMVEE KEMI+  C+SSAIGIATVSVQ +T  +LP +FQFLSIAVL+CF  VGFA+M   IFKT+SKILYC GGFL  T  F+ATAIPY  +
Subjt:  RGGMTMAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKTVSKILYCVGGFLGFTAFFLATAIPYAPY

Query:  FQIIIFILYLIFCFIF-MLITTIHN-QQPSST-TPPL
        F II+ +LY IFC IF MLI+  HN   PSS+ T PL
Subjt:  FQIIIFILYLIFCFIF-MLITTIHN-QQPSST-TPPL

A0A0A0LEV1 Uncharacterized protein5.6e-0935.66Show/hide
Query:  MAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKTVSKILYCVGGFLGFTAFFLATAIPYAPYFQIII
        + A+MVEE K  I+    +    IA +SVQ +   +LP +F+F+SI  LLC      A +    FKT +K+LY +G F   T++ +A AIP   YF +++
Subjt:  MAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKTVSKILYCVGGFLGFTAFFLATAIPYAPYFQIII

Query:  FILYLIFCFIFMLITTIHNQQPSSTTPPL
         +L+LI C   +++ +     P+STT  L
Subjt:  FILYLIFCFIFMLITTIHNQQPSSTTPPL

A0A0A0LQB6 Uncharacterized protein1.3e-6987.65Show/hide
Query:  MCCCWVENCIRKACRLWESLKGEE-----SGRGG--MTMAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTK
        MC CWV +CIRKACRLWESLKGEE      G GG  +TM AEMVEEWKEMIVALCVSSAIGIATVSVQIETNK+LPKTFQFLSI VLLCFGFVGFAKMTK
Subjt:  MCCCWVENCIRKACRLWESLKGEE-----SGRGG--MTMAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTK

Query:  PIFKTVSKILYCVGGFLGFTAFFLATAIPYAPYFQIIIFILYLIFCFIFMLITTIHNQQPSS
        PIFKTVSKILYCVGGFLG TAFF+ATAIP+APYFQIIIFILYL+FCFIFMLITTIHNQQPSS
Subjt:  PIFKTVSKILYCVGGFLGFTAFFLATAIPYAPYFQIIIFILYLIFCFIFMLITTIHNQQPSS

A0A0A0LQP5 Uncharacterized protein2.2e-2151.13Show/hide
Query:  RGGMTMAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKTVSKILYCVGGFLGFTAFFLATAIPY-AP
        R  + + AE VEE KE I+ LCVSSAIGI T SVQI+T  +LP +FQ LS+ +LLCF  V FA+M + +F+T+S+ILYCVG F+  T  F+ATAI Y   
Subjt:  RGGMTMAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKTVSKILYCVGGFLGFTAFFLATAIPY-AP

Query:  YFQIIIFILYLIF---CFIFMLITTIHNQQPSS
        +F  I+ +LY IF   C IF++  +I +  PSS
Subjt:  YFQIIIFILYLIF---CFIFMLITTIHNQQPSS

A0A0A0LSX4 Uncharacterized protein2.3e-2365.35Show/hide
Query:  RGGMTMAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKTVSKILYCVGGFLGFTAFFLATAIPYAPY
        R    +AAEMVEEWK+MI+  CVSSAIGIATVSV I+T   LP +FQ LSIAVLLCF  V FA+M   IF+T+SKILYCVGG L  ++ F+ATAIPYA  
Subjt:  RGGMTMAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKTVSKILYCVGGFLGFTAFFLATAIPYAPY

Query:  F
        F
Subjt:  F

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTGTTGTTGGGTTGAAAATTGCATTAGAAAGGCATGTAGGTTATGGGAATCATTAAAGGGTGAAGAAAGTGGCCGTGGCGGGATGACGATGGCGGCGGAGATGGT
GGAGGAATGGAAGGAGATGATAGTAGCATTATGTGTATCATCAGCCATAGGGATAGCAACGGTGTCTGTTCAAATAGAAACAAATAAACGACTTCCAAAAACATTTCAGT
TTCTATCCATTGCTGTGTTGCTTTGTTTTGGGTTTGTGGGTTTTGCAAAAATGACCAAACCCATTTTCAAAACAGTTTCAAAGATACTGTACTGTGTGGGAGGGTTTTTG
GGTTTTACAGCCTTTTTCTTAGCCACTGCCATTCCATATGCTCCATATTTTCAAATCATTATCTTCATCCTTTACTTGATCTTTTGCTTCATCTTCATGCTCATCACCAC
CATTCACAACCAACAACCTTCTTCCACCACTCCTCCCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTGTTGTTGGGTTGAAAATTGCATTAGAAAGGCATGTAGGTTATGGGAATCATTAAAGGGTGAAGAAAGTGGCCGTGGCGGGATGACGATGGCGGCGGAGATGGT
GGAGGAATGGAAGGAGATGATAGTAGCATTATGTGTATCATCAGCCATAGGGATAGCAACGGTGTCTGTTCAAATAGAAACAAATAAACGACTTCCAAAAACATTTCAGT
TTCTATCCATTGCTGTGTTGCTTTGTTTTGGGTTTGTGGGTTTTGCAAAAATGACCAAACCCATTTTCAAAACAGTTTCAAAGATACTGTACTGTGTGGGAGGGTTTTTG
GGTTTTACAGCCTTTTTCTTAGCCACTGCCATTCCATATGCTCCATATTTTCAAATCATTATCTTCATCCTTTACTTGATCTTTTGCTTCATCTTCATGCTCATCACCAC
CATTCACAACCAACAACCTTCTTCCACCACTCCTCCCCTTTGA
Protein sequenceShow/hide protein sequence
MCCCWVENCIRKACRLWESLKGEESGRGGMTMAAEMVEEWKEMIVALCVSSAIGIATVSVQIETNKRLPKTFQFLSIAVLLCFGFVGFAKMTKPIFKTVSKILYCVGGFL
GFTAFFLATAIPYAPYFQIIIFILYLIFCFIFMLITTIHNQQPSSTTPPL