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IVF0008053 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008053
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionribonuclease P protein subunit p38 isoform X6
Genome locationchr09:17128627..17132105
RNA-Seq ExpressionIVF0008053
SyntenyIVF0008053
Gene Ontology termsGO:0043232 - intracellular non-membrane-bounded organelle (cellular component)
InterPro domainsIPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466254.1 PREDICTED: uncharacterized protein LOC103503720 isoform X1 [Cucumis melo]2.71e-12497.34Show/hide
Query:  MGKNPKSSAHPVATLQSKPYEDS-YEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVV
        MGKNPKSSAHPVATLQSKPYEDS YEGERLDELLLSIQREIKTARGLNAESLPEK WLK  +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVV
Subjt:  MGKNPKSSAHPVATLQSKPYEDS-YEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVV

Query:  YSVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
        YSVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  YSVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

XP_008466263.1 PREDICTED: uncharacterized protein LOC103503720 isoform X2 [Cucumis melo]3.88e-12697.86Show/hide
Query:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVY
        MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEK WLK  +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVY
Subjt:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVY

Query:  SVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
        SVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  SVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

XP_008466271.1 PREDICTED: uncharacterized protein LOC103503720 isoform X3 [Cucumis melo]2.63e-12698.39Show/hide
Query:  MGKNPKSSAHPVATLQSKPYEDS-YEGERLDELLLSIQREIKTARGLNAESLPEKIWLKYAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYS
        MGKNPKSSAHPVATLQSKPYEDS YEGERLDELLLSIQREIKTARGLNAESLPEK WLK+AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYS
Subjt:  MGKNPKSSAHPVATLQSKPYEDS-YEGERLDELLLSIQREIKTARGLNAESLPEKIWLKYAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYS

Query:  VIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
        VIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  VIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

XP_008466288.1 PREDICTED: ribonuclease P protein subunit p38 isoform X6 [Cucumis melo]1.47e-10888.77Show/hide
Query:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVY
        MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEK WLK  +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ   
Subjt:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVY

Query:  SVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
                      AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  SVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

XP_016903668.1 PREDICTED: uncharacterized protein LOC103503720 isoform X4 [Cucumis melo]8.73e-11197.06Show/hide
Query:  MGKNPKSSAHPVATLQSKPYEDS-YEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVV
        MGKNPKSSAHPVATLQSKPYEDS YEGERLDELLLSIQREIKTARGLNAESLPEK WLK  +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVV
Subjt:  MGKNPKSSAHPVATLQSKPYEDS-YEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVV

Query:  YSVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK
        YSVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK
Subjt:  YSVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK

TrEMBL top hitse value%identityAlignment
A0A1S3CQU5 uncharacterized protein LOC103503720 isoform X26.3e-9797.86Show/hide
Query:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVY
        MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEK WLK  +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVY
Subjt:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVY

Query:  SVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
        SVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  SVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

A0A1S3CR39 ribonuclease P protein subunit p38 isoform X61.4e-8388.77Show/hide
Query:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVY
        MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEK WLK  +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ   
Subjt:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVY

Query:  SVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
                      AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  SVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

A0A1S3CS60 uncharacterized protein LOC103503720 isoform X11.6e-9597.34Show/hide
Query:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVV
        MGKNPKSSAHPVATLQSKPYED SYEGERLDELLLSIQREIKTARGLNAESLPEK WLK  +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVV
Subjt:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVV

Query:  YSVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
        YSVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  YSVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

A0A1S3CS63 uncharacterized protein LOC103503720 isoform X34.8e-9798.39Show/hide
Query:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKIWLKYAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYS
        MGKNPKSSAHPVATLQSKPYED SYEGERLDELLLSIQREIKTARGLNAESLPEK WLK+AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYS
Subjt:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKIWLKYAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYS

Query:  VIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
        VIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  VIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

A0A1S4E613 uncharacterized protein LOC103503720 isoform X44.3e-8597.06Show/hide
Query:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVV
        MGKNPKSSAHPVATLQSKPYED SYEGERLDELLLSIQREIKTARGLNAESLPEK WLK  +AIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVV
Subjt:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVV

Query:  YSVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK
        YSVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK
Subjt:  YSVIYVGQCYLGFRLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G01790.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein9.8e-3451.52Show/hide
Query:  DSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTAN
        D YEGERL  LL  IQR I+T++  N  SLPEKIWLK   AIG+NEVTR LERM P   S +  NP       +LQVV                 +L A+
Subjt:  DSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLK--YAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTAN

Query:  CNPRWLTNHVPCLAMSRKVPLILVKD-KEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQR
        C PR LT H+P LA SR VP++ V+D K  SLRLGELV LKTA+AIGIK+ G+ +N L+ +IL R
Subjt:  CNPRWLTNHVPCLAMSRKVPLILVKD-KEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGAACCCTAAATCTTCTGCTCATCCTGTTGCAACCCTTCAATCCAAACCTTACGAAGATTCCTACGAAGGTGAACGTCTCGATGAGTTGCTACTGTCGATTCA
GAGAGAGATAAAGACAGCTAGAGGTTTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTTAAGTATGCAATTGGAGTTAATGAGGTTACTAGAGCTCTTGAACGGATGA
CACCATGTGGGGATTCTGCTCGCTTAATGAACCCTAATTATAAGGCGTGTAAAGTCAAGCTTCAGGTAGTCTACTCGGTTATTTATGTTGGGCAATGCTATCTTGGGTTT
AGACTCGCTATACTATTAACAGCCAATTGCAACCCTCGATGGCTTACAAACCATGTGCCTTGCTTGGCCATGTCTAGGAAGGTACCATTGATACTCGTGAAAGATAAAGA
AGGATCATTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATTGCAATTGGAATAAAGTCGAATGGGAGCCCTGTTAATCAACTTATTGATGAAATTCTTCAAAGAA
CAAAATAA
mRNA sequenceShow/hide mRNA sequence
CTCTACATATTTTGAATTCTACAGTTGCAATAATACTTCACCAAAATTTCAAACAAAGCCTCGGGTTGGCAGTGCTACTTCGTCATCGTCCCGGTTTCACTATGGTTACT
TCCAATCGGAGAACGCCGCCGTTATTTCTTTCCAGACTTTGAAACTACACTTTCCACCCAAGTTTTCACTAATGGGAAAGAACCCTAAATCTTCTGCTCATCCTGTTGCA
ACCCTTCAATCCAAACCTTACGAAGATTCCTACGAAGGTGAACGTCTCGATGAGTTGCTACTGTCGATTCAGAGAGAGATAAAGACAGCTAGAGGTTTGAATGCGGAATC
CTTGCCGGAAAAAATTTGGCTTAAGTATGCAATTGGAGTTAATGAGGTTACTAGAGCTCTTGAACGGATGACACCATGTGGGGATTCTGCTCGCTTAATGAACCCTAATT
ATAAGGCGTGTAAAGTCAAGCTTCAGGTAGTCTACTCGGTTATTTATGTTGGGCAATGCTATCTTGGGTTTAGACTCGCTATACTATTAACAGCCAATTGCAACCCTCGA
TGGCTTACAAACCATGTGCCTTGCTTGGCCATGTCTAGGAAGGTACCATTGATACTCGTGAAAGATAAAGAAGGATCATTAAGGTTAGGTGAACTCGTTAACCTTAAAAC
AGCAATTGCAATTGGAATAAAGTCGAATGGGAGCCCTGTTAATCAACTTATTGATGAAATTCTTCAAAGAACAAAATAAAGACACGTTTCATGAGTACAACCAAGTTGTC
CGGTGTTCACTGTACAGTAAAAATGATGTGAAATTGAAGCAGGTTCTTATCTTCTTCCCTCTAGCAGTCTGAAATGTCTAGCTTGCTAATCACATGAAATGGGTTCGAGT
TGATTCATTCTAGATAATGACCACCACTTTAGTTGGAAAGATAGCTCGTAGATTTGGGGAATGTTGATCTTTTGAAAAGGTTGTTTGTGGCTGGAGTTACGAAAATTCGT
AGTAACATGTGTCTTGTACATTCGATTGGAGGTTATGGAGATGAAAGATTACTTGTGTTTGGTATGCCTTACATTGTTTGTGTTAGACATGAATTTGTATTCCTATTAAT
TCCTATTAAATCCATCCATTTAAAATCAACCCAGC
Protein sequenceShow/hide protein sequence
MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKIWLKYAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGF
RLAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK