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IVF0008084 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008084
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionArabinogalactan peptide 23-like
Genome locationchr08:17011681..17011869
RNA-Seq ExpressionIVF0008084
SyntenyIVF0008084
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035760.1 arabinogalactan peptide 23-like [Cucumis melo var. makuwa]1.22e-30100Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
KAE8649766.1 hypothetical protein Csa_011936, partial [Cucumis sativus]6.93e-2593.1Show/hide
Query:  NFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        NFACAAFI V ASLSMVLASDEAASPAPGPSS  SATLPVVGTLLGASAASLIAYCLQ
Subjt:  NFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
KCW90250.1 hypothetical protein EUGRSUZ_A02403, partial [Eucalyptus grandis]3.89e-1259.68Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        M+MK  +CA  +A  AS+S VLASD++ +PAPGPSSG SA LPV G+L+GAS  S  AY LQ
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
OVA12266.1 hypothetical protein BVC80_1779g40 [Macleaya cordata]1.43e-1151.61Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        M+MK  +CA  IAV AS++  LA+DEA +PAPGP+S    T+PV+G+L+GAS  S  A+ +Q
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
PNT29922.1 hypothetical protein POPTR_006G056200 [Populus trichocarpa]3.43e-1258.06Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        ME+K  +CA  + V AS+S  LA+DE ++PAP P+SG SATLPVVG+L+GAS  S  AY LQ
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
TrEMBL top hitse value%identityAlignment
A0A059DIY4 Uncharacterized protein (Fragment)2.0e-0759.68Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        M+MK  +CA  +A  AS+S VLASD++ +PAPGPSSG SA LPV G+L+GAS  S  AY LQ
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
A0A200QP69 Uncharacterized protein1.0e-0651.61Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        M+MK  +CA  IAV AS++  LA+DEA +PAPGP+S    T+PV+G+L+GAS  S  A+ +Q
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
A0A2K1ZXB0 Uncharacterized protein3.5e-0758.06Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        ME+K  +CA  + V AS+S  LA+DE ++PAP P+SG SATLPVVG+L+GAS  S  AY LQ
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
A0A5D3E271 Arabinogalactan peptide 23-like3.2e-21100Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
A0A6V7PL33 Uncharacterized protein1.7e-0657.38Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCL
        MEMK  ACAA +A  AS +  LA+D AA+PAPGP+SG  A  P VGT++GA+  S +AYCL
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCL
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 237.4e-0750.82Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCL
        MEMK  AC    A  AS++ V+A++E  +PAPGP+S  SA LP +G+L+GAS  SL +Y L
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCL
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)4.2e-0550Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGP-SSGVSATLPVVGTLLGASAASLIAYCL
        MEMK  AC    A  AS++ V+A+ E  +PAPGP +SG S  +P +G+L+GAS  SL AY L
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGP-SSGVSATLPVVGTLLGASAASLIAYCL
AT3G20865.1 arabinogalactan protein 402.7e-0441.94Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
        MEMKN   A FI+ V   S+  A+ E+ +P+PG SS  +   PVVG+++ AS ++ +A  LQ
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ
AT3G57690.1 arabinogalactan protein 235.3e-0850.82Show/hide
Query:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCL
        MEMK  AC    A  AS++ V+A++E  +PAPGP+S  SA LP +G+L+GAS  SL +Y L
Subjt:  MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGAAGAACTTTGCCTGTGCCGCCTTCATCGCTGTTGTCGCCTCCCTGAGCATGGTTTTGGCCTCTGATGAAGCAGCATCCCCCGCTCCCGGCCCATCCAGCGG
TGTTTCCGCTACTTTGCCCGTCGTCGGGACATTGCTAGGTGCATCTGCTGCCTCTCTCATTGCTTACTGCCTTCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGAAGAACTTTGCCTGTGCCGCCTTCATCGCTGTTGTCGCCTCCCTGAGCATGGTTTTGGCCTCTGATGAAGCAGCATCCCCCGCTCCCGGCCCATCCAGCGG
TGTTTCCGCTACTTTGCCCGTCGTCGGGACATTGCTAGGTGCATCTGCTGCCTCTCTCATTGCTTACTGCCTTCAGTAA
Protein sequenceShow/hide protein sequence
MEMKNFACAAFIAVVASLSMVLASDEAASPAPGPSSGVSATLPVVGTLLGASAASLIAYCLQ