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IVF0008090 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008090
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCytochrome c oxidase subunit 1
Genome locationchr07:4198937..4199236
RNA-Seq ExpressionIVF0008090
SyntenyIVF0008090
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0005622 - intracellular (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEW71044.1 cytochrome c oxidase subunit I, mitochondrial [Tanacetum cinerariifolium]6.65e-0852.73Show/hide
Query:  GSGNFLVLCRYVWNQKYKKRDTICGSNRNRICYSSSSGSR---MQRAEVMIKGLG
        GSG+ L L RY+W  +YKKRDTIC SN +R CYS SSGSR   ++   + ++G+G
Subjt:  GSGNFLVLCRYVWNQKYKKRDTICGSNRNRICYSSSSGSR---MQRAEVMIKGLG

KAF3946461.1 hypothetical protein CMV_027276 [Castanea mollissima]5.79e-0968.42Show/hide
Query:  GNFLVLCRYVWNQKYKKRDTICGSNRNRICYSSSSGSR
        GNFLVL  Y+W Q YKKRDT+C +NR+R CYS  SGSR
Subjt:  GNFLVLCRYVWNQKYKKRDTICGSNRNRICYSSSSGSR

KAG7014534.1 30S ribosomal protein S11, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]9.88e-1054.84Show/hide
Query:  GSGNFLVLCRYVWNQKYKKRDTICGSNRNRICYSSSSGSRMQRAEVMIKGLGLRRDAALRAI
        GS NFL+L  Y+W Q+ K RDTIC SNR      + +   MQ+ EVMIKG  L RDA LRAI
Subjt:  GSGNFLVLCRYVWNQKYKKRDTICGSNRNRICYSSSSGSRMQRAEVMIKGLGLRRDAALRAI

XP_030483739.1 uncharacterized protein LOC115700311 [Cannabis sativa]6.77e-1068Show/hide
Query:  KYKKRDTICGSNRNRICYSSSSGSRMQRAEVMIKGLGLRRDAALRAIRRS
        +YKKRDTIC SNR+R    +     MQ+AEVMIKG GL RDAALRAIRRS
Subjt:  KYKKRDTICGSNRNRICYSSSSGSRMQRAEVMIKGLGLRRDAALRAIRRS

YP_009747265.1 30S ribosomal protein S11 [Aesculus chinensis]6.87e-0955.71Show/hide
Query:  GSGNFLVLCRYVWNQKYKKRDTICGSNRNRICYSSSSGSRMQRAE---VMIKGL--GLRRDAALRAIRRS
        GSG FLV  RY+  + YKKRDT+C SNR R  Y SS+ SR   +    + IKG   GL RDAALR IRRS
Subjt:  GSGNFLVLCRYVWNQKYKKRDTICGSNRNRICYSSSSGSRMQRAE---VMIKGL--GLRRDAALRAIRRS

TrEMBL top hitse value%identityAlignment
A0A6G7IXF6 30S ribosomal protein S11, chloroplastic7.9e-0655.71Show/hide
Query:  GSGNFLVLCRYVWNQKYKKRDTICGSNRNRICYSSSSGSRMQRAE---VMIKG--LGLRRDAALRAIRRS
        GSG FLV  RY+  + YKKRDT+C SNR R  Y SS+ SR   +    + IKG   GL RDAALR IRRS
Subjt:  GSGNFLVLCRYVWNQKYKKRDTICGSNRNRICYSSSSGSRMQRAE---VMIKG--LGLRRDAALRAIRRS

A0A6S7LYY1 Cytochrome c oxidase subunit 11.1e-0456.9Show/hide
Query:  VKMYGSGNFLVLCRYVWNQKYKKRDTICGSN-RNRICYSSSSGSRMQRAEVMIKGLGL
        VK  GSG  L L RY+W + YKKRDTIC SN   + C     G  MQRAEVM KG GL
Subjt:  VKMYGSGNFLVLCRYVWNQKYKKRDTICGSN-RNRICYSSSSGSRMQRAEVMIKGLGL

A0A6S7LZ06 Cytochrome c oxidase subunit 11.1e-0456.9Show/hide
Query:  VKMYGSGNFLVLCRYVWNQKYKKRDTICGSN-RNRICYSSSSGSRMQRAEVMIKGLGL
        VK  GSG  L L RY+W + YKKRDTIC SN   + C     G  MQRAEVM KG GL
Subjt:  VKMYGSGNFLVLCRYVWNQKYKKRDTICGSN-RNRICYSSSSGSRMQRAEVMIKGLGL

A0A6S7M1X3 COX1 domain-containing protein1.1e-0456.9Show/hide
Query:  VKMYGSGNFLVLCRYVWNQKYKKRDTICGSN-RNRICYSSSSGSRMQRAEVMIKGLGL
        VK  GSG  L L RY+W + YKKRDTIC SN   + C     G  MQRAEVM KG GL
Subjt:  VKMYGSGNFLVLCRYVWNQKYKKRDTICGSN-RNRICYSSSSGSRMQRAEVMIKGLGL

A0A7J9L1Z3 Uncharacterized protein4.3e-0450.88Show/hide
Query:  LAHVKMYGSGNFLVLCRYVWNQKYKKRDTICGSNRNRICYSSSSGSRMQRAEVMIKG
        L  ++MYGSGN LVL R++  Q Y K D  C SNRN  CYSSSS  R   +    KG
Subjt:  LAHVKMYGSGNFLVLCRYVWNQKYKKRDTICGSNRNRICYSSSSGSRMQRAEVMIKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
ATCG00750.1 ribosomal protein S117.3e-0488Show/hide
Query:  MQRAEVMIKGLGLRRDAALRAIRRS
        MQRAEV IKG GL RDAALRAIRRS
Subjt:  MQRAEVMIKGLGLRRDAALRAIRRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTATTAGCTCACGTAAAAATGTATGGGTCGGGTAATTTCTTGGTCCTTTGCCGGTACGTGTGGAATCAAAAGTACAAGAAGAGGGACACCATTTGCGGCTCAAA
TCGCAACAGGATATGCTATTCGAGCAGTAGTGGATCAAGGATGCAACGAGCTGAAGTTATGATAAAGGGCCTTGGTCTCAGAAGAGATGCAGCATTAAGAGCTATTCGAA
GAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTATTAGCTCACGTAAAAATGTATGGGTCGGGTAATTTCTTGGTCCTTTGCCGGTACGTGTGGAATCAAAAGTACAAGAAGAGGGACACCATTTGCGGCTCAAA
TCGCAACAGGATATGCTATTCGAGCAGTAGTGGATCAAGGATGCAACGAGCTGAAGTTATGATAAAGGGCCTTGGTCTCAGAAGAGATGCAGCATTAAGAGCTATTCGAA
GAAGTTGA
Protein sequenceShow/hide protein sequence
MDVLAHVKMYGSGNFLVLCRYVWNQKYKKRDTICGSNRNRICYSSSSGSRMQRAEVMIKGLGLRRDAALRAIRRS