; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0008137 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008137
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr07:147538..151327
RNA-Seq ExpressionIVF0008137
SyntenyIVF0008137
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649970.1 hypothetical protein Csa_012955 [Cucumis sativus]1.37e-18892.28Show/hide
Query:  MKFLQLFGWKQASNIDCLNGGCKGIVG---EHAVDEHFSDTHSGEGSFSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEI
        MKFLQLFGW+QA N+DC NGGC+GIVG      VDEHFSD        SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQK+FNFEI
Subjt:  MKFLQLFGWKQASNIDCLNGGCKGIVG---EHAVDEHFSDTHSGEGSFSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEI

Query:  LHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYP
        LHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYP
Subjt:  LHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYP

Query:  GGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS
        GGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHI+DPFHNNFLSLLNSS
Subjt:  GGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS

TYK19913.1 chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo var. makuwa]1.38e-19094.07Show/hide
Query:  MKFLQLFGWKQASNIDCLNGGCKGIVGEHAVDEHFS-DTHSGEGSFSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILH
        MKFLQLFGWKQASNIDCLNGGCKGIVG   +    S   + GE   SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILH
Subjt:  MKFLQLFGWKQASNIDCLNGGCKGIVGEHAVDEHFS-DTHSGEGSFSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILH

Query:  ARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGG
        ARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGG
Subjt:  ARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGG

Query:  VLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS
        VLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS
Subjt:  VLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS

XP_004145567.1 chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Cucumis sativus]1.66e-16699.11Show/hide
Query:  SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL
        SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQK+FNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL
Subjt:  SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL

Query:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
        GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
Subjt:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG

Query:  PVQNLLDHISDPFHNNFLSLLNSS
        PVQNLLDHI+DPFHNNFLSLLNSS
Subjt:  PVQNLLDHISDPFHNNFLSLLNSS

XP_008453032.2 PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo]4.63e-167100Show/hide
Query:  SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL
        SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL
Subjt:  SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL

Query:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
        GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
Subjt:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG

Query:  PVQNLLDHISDPFHNNFLSLLNSS
        PVQNLLDHISDPFHNNFLSLLNSS
Subjt:  PVQNLLDHISDPFHNNFLSLLNSS

XP_038898449.1 chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Benincasa hispida]4.62e-16698.66Show/hide
Query:  SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL
        SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL
Subjt:  SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL

Query:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
        GIPGLHLAGSQGV+VIAICQAILMVGPEYARYCGIEALEPLGI+LPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
Subjt:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG

Query:  PVQNLLDHISDPFHNNFLSLLNSS
        PVQNLL+HISDPFHNNFLSLLNSS
Subjt:  PVQNLLDHISDPFHNNFLSLLNSS

TrEMBL top hitse value%identityAlignment
A0A0A0L0U5 Chlorophyll a-b binding protein, chloroplastic2.0e-14792.36Show/hide
Query:  MKFLQLFGWKQASNIDCLNGGCKGIVG------EHAVDEHFSDTHSGEGSFSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFN
        MKFLQLFGW+QA N+DC NGGC+GIVG      EHAVDEHFSD        SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQK+FN
Subjt:  MKFLQLFGWKQASNIDCLNGGCKGIVG------EHAVDEHFSDTHSGEGSFSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFN

Query:  FEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDI
        FEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDI
Subjt:  FEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDI

Query:  NYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS
        NYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHI+DPFHNNFLSLLNSS
Subjt:  NYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS

A0A1S3BWE1 Chlorophyll a-b binding protein, chloroplastic2.2e-130100Show/hide
Query:  SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL
        SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL
Subjt:  SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL

Query:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
        GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
Subjt:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG

Query:  PVQNLLDHISDPFHNNFLSLLNSS
        PVQNLLDHISDPFHNNFLSLLNSS
Subjt:  PVQNLLDHISDPFHNNFLSLLNSS

A0A5A7VCG1 Chlorophyll a-b binding protein, chloroplastic2.7e-12899.11Show/hide
Query:  SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL
        SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLK  TLDYL
Subjt:  SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL

Query:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
        GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
Subjt:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG

Query:  PVQNLLDHISDPFHNNFLSLLNSS
        PVQNLLDHISDPFHNNFLSLLNSS
Subjt:  PVQNLLDHISDPFHNNFLSLLNSS

A0A5D3D8P8 Chlorophyll a-b binding protein, chloroplastic4.3e-14794.07Show/hide
Query:  MKFLQLFGWKQASNIDCLNGGCKGIVGEHAVDEHFS-DTHSGEGSFSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILH
        MKFLQLFGWKQASNIDCLNGGCKGIVG   +    S   + GE   SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILH
Subjt:  MKFLQLFGWKQASNIDCLNGGCKGIVGEHAVDEHFS-DTHSGEGSFSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILH

Query:  ARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGG
        ARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGG
Subjt:  ARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGG

Query:  VLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS
        VLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS
Subjt:  VLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS

A0A6J1FCV0 Chlorophyll a-b binding protein, chloroplastic3.5e-12897.32Show/hide
Query:  SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL
        SWYGE+RPRWLGPLPY+YPKYLTGELPGDYGFDIAGLSEDPVAF+KYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL
Subjt:  SWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYL

Query:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
        GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG
Subjt:  GIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKG

Query:  PVQNLLDHISDPFHNNFLSLLNSS
        P+QNLL+H+SDPFHNNFLSLLNSS
Subjt:  PVQNLLDHISDPFHNNFLSLLNSS

SwissProt top hitse value%identityAlignment
P12470 Chlorophyll a-b binding protein E, chloroplastic3.0e-5250.23Show/hide
Query:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG
        WYG +R ++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H RWAML +LG + PE+L   G   F E +W++ G        LDYLG
Subjt:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG

Query:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP
         P   L  +Q ++ I  CQ +LM   E  R  G    EPLG  +  D  YPGG  FDPL L++D  AF ELKVKEIKNGRLAM +  GF+ QA +TGKGP
Subjt:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP

Query:  VQNLLDHISDPFHNN
        ++NL DH++DP +NN
Subjt:  VQNLLDHISDPFHNN

P14278 Chlorophyll a-b binding protein 4, chloroplastic1.0e-5251.63Show/hide
Query:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG
        WYGE+RP++LGP     P YLTGE PGDYG+D AGLS DP  F +    E++H RWAML +LG + PEIL   G   F E +W++ G        LDYLG
Subjt:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG

Query:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP
         P  +L  +Q ++ I  CQ +LM   E  R  G     PLG  L  D  YPGG  FDPL L+ D  AF ELKVKEIKNGRLAM +  GF+ QA +TGKGP
Subjt:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP

Query:  VQNLLDHISDPFHNN
        ++NL DHI+DP  NN
Subjt:  VQNLLDHISDPFHNN

P22686 Chlorophyll a-b binding protein of LHCII type I, chloroplastic6.0e-5348.84Show/hide
Query:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG
        WYG +R +WLGP   + P YLTGE PGDYG+D AGLS DP  F+KY   E++HARWA+L +LG L PE+L  +    F EP+W++ G        LDYLG
Subjt:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG

Query:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP
         P   L  +Q ++     Q +LM   E  R  G  A E L    PG+        FDPL L+ D   F ELKVKEIKNGRLAM +  GF+ QA +TGKGP
Subjt:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP

Query:  VQNLLDHISDPFHNN
        +QNL DH++DP  NN
Subjt:  VQNLLDHISDPFHNN

Q9C9K1 Chlorophyll a-b binding protein 7, chloroplastic2.7e-11478.11Show/hide
Query:  SDTHSGEGSFSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYS
        S          WYG+ERPRW GP+PYDYP YLTGELPGDYGFDIAGL +D + F KYFNFEILHARWAMLA+LGAL+PE+ D+ G FHF EP+WWRVGYS
Subjt:  SDTHSGEGSFSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYS

Query:  KLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF
        KL+G+TL+YLGIPGLH+AGSQGVIVIAICQ +LMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+D  AFE+LKVKEIKNGRLAMVAWLGF
Subjt:  KLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF

Query:  YSQAALTGKGPVQNLLDHISDPFHNNFLSLLNS
        Y+QAA TGKGPVQNL+DH+SDP HNN +++L +
Subjt:  YSQAALTGKGPVQNLLDHISDPFHNNFLSLLNS

Q9XF87 Chlorophyll a-b binding protein 2.4, chloroplastic4.6e-5351.63Show/hide
Query:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG
        WYG +RP++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G        LDYLG
Subjt:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG

Query:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP
         P  +L  +Q ++ I  CQ +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TGKGP
Subjt:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP

Query:  VQNLLDHISDPFHNN
        ++NL DHI+DP  NN
Subjt:  VQNLLDHISDPFHNN

Arabidopsis top hitse value%identityAlignment
AT1G76570.1 Chlorophyll A-B binding family protein1.9e-11578.11Show/hide
Query:  SDTHSGEGSFSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYS
        S          WYG+ERPRW GP+PYDYP YLTGELPGDYGFDIAGL +D + F KYFNFEILHARWAMLA+LGAL+PE+ D+ G FHF EP+WWRVGYS
Subjt:  SDTHSGEGSFSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYS

Query:  KLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF
        KL+G+TL+YLGIPGLH+AGSQGVIVIAICQ +LMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+D  AFE+LKVKEIKNGRLAMVAWLGF
Subjt:  KLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF

Query:  YSQAALTGKGPVQNLLDHISDPFHNNFLSLLNS
        Y+QAA TGKGPVQNL+DH+SDP HNN +++L +
Subjt:  YSQAALTGKGPVQNLLDHISDPFHNNFLSLLNS

AT2G05070.1 photosystem II light harvesting complex gene 2.28.1e-5350.7Show/hide
Query:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG
        WYG +RP++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G        LDYLG
Subjt:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG

Query:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP
         P  +L  +Q ++ I   Q +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TGKGP
Subjt:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP

Query:  VQNLLDHISDPFHNN
        ++NL DH++DP  NN
Subjt:  VQNLLDHISDPFHNN

AT2G05100.1 photosystem II light harvesting complex gene 2.18.1e-5350.7Show/hide
Query:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG
        WYG +RP++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G        LDYLG
Subjt:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG

Query:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP
         P  +L  +Q ++ I   Q +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TGKGP
Subjt:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP

Query:  VQNLLDHISDPFHNN
        ++NL DH++DP  NN
Subjt:  VQNLLDHISDPFHNN

AT3G27690.1 photosystem II light harvesting complex gene 2.33.3e-5451.63Show/hide
Query:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG
        WYG +RP++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G        LDYLG
Subjt:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG

Query:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP
         P  +L  +Q ++ I  CQ +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TGKGP
Subjt:  IPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGP

Query:  VQNLLDHISDPFHNN
        ++NL DHI+DP  NN
Subjt:  VQNLLDHISDPFHNN

AT5G54270.1 light-harvesting chlorophyll B-binding protein 33.6e-5347.03Show/hide
Query:  GSFSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTL
        G+  WYG +R ++LGP     P YLTGE PGDYG+D AGLS DP AF K    E++H RWAML + G + PE+L  +    F EP+W++ G        L
Subjt:  GSFSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTL

Query:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALT
        DYLG P  +L  +Q ++ +   Q ILM   E  R  G++ +        G+  YPGG  FDPL L+ D   F ELKVKEIKNGRLAM +  GF+ QA +T
Subjt:  DYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALT

Query:  GKGPVQNLLDHISDPFHNN
        GKGP++NLLDH+ +P  NN
Subjt:  GKGPVQNLLDHISDPFHNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTTCTCCAGTTATTTGGCTGGAAACAGGCATCAAACATTGATTGTCTGAATGGCGGATGTAAAGGGATTGTTGGAGAACATGCAGTAGATGAGCACTTCTCTGA
CACACATTCAGGTGAAGGAAGCTTCTCGTGGTATGGAGAAGAGCGTCCTCGGTGGCTTGGTCCACTACCATATGATTATCCAAAGTATCTGACAGGTGAACTGCCTGGTG
ATTATGGATTTGATATTGCAGGTTTGAGTGAGGATCCTGTGGCTTTCCAGAAATACTTCAACTTTGAAATATTGCATGCTCGTTGGGCTATGTTAGCATCCCTAGGTGCT
TTAGTTCCAGAGATCTTGGATATTTTTGGAGCGTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAAGGAGATACACTTGACTATCTTGGAAT
ACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATCGTCATTGCAATTTGCCAAGCTATTTTGATGGTTGGACCCGAATATGCAAGATATTGTGGCATAGAGGCATTGG
AGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCAGGTGGTGTGTTGTTTGATCCCTTGAATCTGTCCAAGGATGCTGCAGCCTTTGAGGAACTAAAAGTAAAA
GAGATTAAAAATGGGCGTTTAGCCATGGTTGCCTGGCTAGGATTTTACAGTCAAGCTGCTTTGACGGGTAAGGGACCAGTCCAAAACCTTCTTGACCACATTTCAGATCC
TTTCCACAATAACTTTCTTTCCCTGCTCAATTCTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTTCTCCAGTTATTTGGCTGGAAACAGGCATCAAACATTGATTGTCTGAATGGCGGATGTAAAGGGATTGTTGGAGAACATGCAGTAGATGAGCACTTCTCTGA
CACACATTCAGGTGAAGGAAGCTTCTCGTGGTATGGAGAAGAGCGTCCTCGGTGGCTTGGTCCACTACCATATGATTATCCAAAGTATCTGACAGGTGAACTGCCTGGTG
ATTATGGATTTGATATTGCAGGTTTGAGTGAGGATCCTGTGGCTTTCCAGAAATACTTCAACTTTGAAATATTGCATGCTCGTTGGGCTATGTTAGCATCCCTAGGTGCT
TTAGTTCCAGAGATCTTGGATATTTTTGGAGCGTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAAGGAGATACACTTGACTATCTTGGAAT
ACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATCGTCATTGCAATTTGCCAAGCTATTTTGATGGTTGGACCCGAATATGCAAGATATTGTGGCATAGAGGCATTGG
AGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCAGGTGGTGTGTTGTTTGATCCCTTGAATCTGTCCAAGGATGCTGCAGCCTTTGAGGAACTAAAAGTAAAA
GAGATTAAAAATGGGCGTTTAGCCATGGTTGCCTGGCTAGGATTTTACAGTCAAGCTGCTTTGACGGGTAAGGGACCAGTCCAAAACCTTCTTGACCACATTTCAGATCC
TTTCCACAATAACTTTCTTTCCCTGCTCAATTCTTCATAA
Protein sequenceShow/hide protein sequence
MKFLQLFGWKQASNIDCLNGGCKGIVGEHAVDEHFSDTHSGEGSFSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGA
LVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVK
EIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHISDPFHNNFLSLLNSS