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IVF0008138 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008138
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionnuclear pore complex protein NUP160
Genome locationchr05:9066207..9066469
RNA-Seq ExpressionIVF0008138
SyntenyIVF0008138
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0033036 - macromolecule localization (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0071702 - organic substance transport (biological process)
GO:0071705 - nitrogen compound transport (biological process)
GO:0005643 - nuclear pore (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457192.1 PREDICTED: nuclear pore complex protein NUP160 isoform X1 [Cucumis melo]9.42e-1789.13Show/hide
Query:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
        A +   AEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
Subjt:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
XP_008457193.1 PREDICTED: nuclear pore complex protein NUP160 isoform X2 [Cucumis melo]9.42e-1789.13Show/hide
Query:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
        A +   AEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
Subjt:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
XP_008457194.1 PREDICTED: nuclear pore complex protein NUP160 isoform X3 [Cucumis melo]9.42e-1789.13Show/hide
Query:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
        A +   AEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
Subjt:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
XP_008457195.1 PREDICTED: nuclear pore complex protein NUP160 isoform X4 [Cucumis melo]9.42e-1789.13Show/hide
Query:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
        A +   AEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
Subjt:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
XP_008457197.1 PREDICTED: nuclear pore complex protein NUP160 isoform X5 [Cucumis melo]9.42e-1789.13Show/hide
Query:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
        A +   AEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
Subjt:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
TrEMBL top hitse value%identityAlignment
A0A0A0LNH8 Uncharacterized protein4.5e-1794.12Show/hide
Query:  MLISAFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAKV
        MLISA+SSDR EAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK+
Subjt:  MLISAFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAKV
A0A1S3C4Y2 nuclear pore complex protein NUP160 isoform X21.5e-1289.13Show/hide
Query:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
        A +   AEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
Subjt:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
A0A1S3C516 nuclear pore complex protein NUP160 isoform X51.5e-1289.13Show/hide
Query:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
        A +   AEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
Subjt:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
A0A1S3C5M5 nuclear pore complex protein NUP160 isoform X31.5e-1289.13Show/hide
Query:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
        A +   AEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
Subjt:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
A0A1S3C685 nuclear pore complex protein NUP160 isoform X41.5e-1289.13Show/hide
Query:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
        A +   AEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
Subjt:  AFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
SwissProt top hitse value%identityAlignment
Q9C811 Nuclear pore complex protein NUP1603.2e-0453.49Show/hide
Query:  SDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
        S   EAQ Y LQE+++++QLF S+  SS  +L  THS+FSSAK
Subjt:  SDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
Arabidopsis top hitse value%identityAlignment
AT1G33410.1 SUPPRESSOR OF AUXIN RESISTANCE12.3e-0553.49Show/hide
Query:  SDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
        S   EAQ Y LQE+++++QLF S+  SS  +L  THS+FSSAK
Subjt:  SDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
AT1G33410.2 SUPPRESSOR OF AUXIN RESISTANCE12.3e-0553.49Show/hide
Query:  SDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK
        S   EAQ Y LQE+++++QLF S+  SS  +L  THS+FSSAK
Subjt:  SDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAATTTCTGCATTTTCATCTGATAGGGCAGAAGCACAATGCTACGCTTTGCAAGAAGAGTTTGTTGCTGACCAATTATTTCAGAGCGCTGATTATTCTTCTGATGC
AGTTCTTTGGATTACTCATTCAATATTTTCTTCCGCAAAGGTAAAATCTCATTACTTAGATACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAATTTCTGCATTTTCATCTGATAGGGCAGAAGCACAATGCTACGCTTTGCAAGAAGAGTTTGTTGCTGACCAATTATTTCAGAGCGCTGATTATTCTTCTGATGC
AGTTCTTTGGATTACTCATTCAATATTTTCTTCCGCAAAGGTAAAATCTCATTACTTAGATACGTGA
Protein sequenceShow/hide protein sequence
MLISAFSSDRAEAQCYALQEEFVADQLFQSADYSSDAVLWITHSIFSSAKVKSHYLDT