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IVF0008152 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008152
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLate embryogenesis abundant protein
Genome locationchr01:735813..737256
RNA-Seq ExpressionIVF0008152
SyntenyIVF0008152
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031357.1 uncharacterized protein E6C27_scaffold139G001120 [Cucumis melo var. makuwa]8.32e-63100Show/hide
Query:  MKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTSSRS
        MKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTSSRS
Subjt:  MKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTSSRS
XP_008455025.1 PREDICTED: uncharacterized protein LOC103495298 [Cucumis melo]8.89e-75100Show/hide
Query:  MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDL
        MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDL
Subjt:  MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDL

Query:  NHENNTSSRS
        NHENNTSSRS
Subjt:  NHENNTSSRS
XP_011658881.1 uncharacterized protein LOC105436102 [Cucumis sativus]2.56e-6589.09Show/hide
Query:  MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDL
        M RTR+PLQANPLFLRKMKQLK QFR LVIDSTSQQ LNKKDDETET+SLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASF RLCWFRDSDDVDDL
Subjt:  MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDL

Query:  NHENNTSSRS
        N + +TSS S
Subjt:  NHENNTSSRS
XP_022148740.1 uncharacterized protein LOC111017332 [Momordica charantia]6.14e-4065.66Show/hide
Query:  QANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTS
        +AN + LR+MKQL+RQF S  ++S +++   +++D  ET+  PYNSSTWVPHPRTGIYFPQGHEWVMKD+PENAASFSR+CWFRDSD VDD N + N S
Subjt:  QANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTS
XP_038887565.1 uncharacterized protein LOC120077680 [Benincasa hispida]1.94e-5375.23Show/hide
Query:  MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDL
        M+RT + +QAN LFLRKM+QL+RQF S VI+S  QQ  N+K+DETET+SL YNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFS+LCWFRDSD +DDL
Subjt:  MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDL

Query:  NHENNTSSR
        N +N+ S R
Subjt:  NHENNTSSR
TrEMBL top hitse value%identityAlignment
A0A0A0K7S0 Uncharacterized protein7.9e-4789.52Show/hide
Query:  IPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENN
        +PLQANPLFLRKMKQLK QFR LVIDSTSQQ LNKKDDETET+SLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASF RLCWFRDSDDVDDLN + +
Subjt:  IPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENN

Query:  TSSRS
        TSS S
Subjt:  TSSRS
A0A1S3C0N8 uncharacterized protein LOC1034952984.2e-56100Show/hide
Query:  MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDL
        MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDL
Subjt:  MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDL

Query:  NHENNTSSRS
        NHENNTSSRS
Subjt:  NHENNTSSRS
A0A5D3C8X8 Uncharacterized protein1.4e-46100Show/hide
Query:  MKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTSSRS
        MKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTSSRS
Subjt:  MKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTSSRS
A0A6J1D3R9 uncharacterized protein LOC1110173325.2e-3065Show/hide
Query:  LQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTS
        ++AN + LR+MKQL+RQF S  ++S +++   +++D  ET+  PYNSSTWVPHPRTGIYFPQGHEWVMKD+PENAASFSR+CWFRDSD VDD N + N S
Subjt:  LQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTS
A0A6J1JN70 uncharacterized protein LOC1114862091.1e-2763.55Show/hide
Query:  MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDL
        M+RT +  QAN L  RK+KQL+RQF SL   S ++       +ETET+ L YNSSTWVPHPRTGIYFPQGHEWVMKD+PENAASFS + WFRD D VDDL
Subjt:  MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDL

Query:  NHENNTS
        N + + S
Subjt:  NHENNTS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73120.1 unknown protein9.7e-0561.54Show/hide
Query:  SSTWVPHPRTGIYFPQGHEWVMKDIP
        +S+WVPH  TGIY+P+G E VM+D+P
Subjt:  SSTWVPHPRTGIYFPQGHEWVMKDIP
AT3G19550.1 unknown protein1.2e-1039.81Show/hide
Query:  MSRTRIPLQANPLFLRKMKQLKRQ--FRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVD
        M RT I  +A  L LR  KQ + +    S    S    V   +D             +WVPHPRTGI+FP G E VM+D+P  AASF    W R+ D VD
Subjt:  MSRTRIPLQANPLFLRKMKQLKRQ--FRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVD

Query:  ----DLNH
            DL+H
Subjt:  ----DLNH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGAACTCGTATCCCTCTCCAAGCAAATCCATTGTTTCTTAGGAAAATGAAGCAATTGAAACGGCAATTCAGGAGCCTTGTAATTGATTCCACAAGCCAACAAGT
CCTAAATAAAAAAGATGATGAGACAGAAACCAAGTCATTGCCCTATAACTCTTCCACTTGGGTGCCTCATCCTCGCACTGGAATTTACTTCCCTCAAGGTCATGAGTGGG
TCATGAAGGACATCCCCGAGAATGCAGCTTCCTTCTCTCGACTTTGTTGGTTTCGGGATTCTGATGATGTCGACGACTTGAACCATGAAAACAATACCTCTTCGAGGTCT
TGA
mRNA sequenceShow/hide mRNA sequence
GCCTTTTCATAATTTCCCTTCCAAATTATTTAGTTCATAATTATATGTCAAGAACTCGTATCCCTCTCCAAGCAAATCCATTGTTTCTTAGGAAAATGAAGCAATTGAAA
CGGCAATTCAGGAGCCTTGTAATTGATTCCACAAGCCAACAAGTCCTAAATAAAAAAGATGATGAGACAGAAACCAAGTCATTGCCCTATAACTCTTCCACTTGGGTGCC
TCATCCTCGCACTGGAATTTACTTCCCTCAAGGTCATGAGTGGGTCATGAAGGACATCCCCGAGAATGCAGCTTCCTTCTCTCGACTTTGTTGGTTTCGGGATTCTGATG
ATGTCGACGACTTGAACCATGAAAACAATACCTCTTCGAGGTCTTGATTTGCCTTTGTTTTTAGGGGTCGGGATTGAGCCTTATTAGGAAAGAAGGTTGTCAATGGAACA
ATGAAAACGATGTATTAATGGCTTGACAACGTATTGCTTGTGAGCTTTTGTTGATAAGAGAGACCCAAATTGACATTGGAATAATGTAAATTAGTTTACTACATATAGGT
AAACTATCGAACAATAAAATGAAG
Protein sequenceShow/hide protein sequence
MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTSSRS