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IVF0008176 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008176
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRab-GAP TBC domain-containing protein
Genome locationchr11:8950242..8950490
RNA-Seq ExpressionIVF0008176
SyntenyIVF0008176
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032483.1 TBC1 domain family member 17 [Cucumis melo var. makuwa]2.20e-4695Show/hide
Query:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHI
        MFTVVESGRYITAPVISEDDQPIHDPLVLL INPDKGP VPQDTGP DGNLDGSRSTPNNNLETAKDPKIIQWMLTLH I
Subjt:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHI
TYJ98321.1 TBC1 domain family member 17 [Cucumis melo var. makuwa]2.21e-4897.5Show/hide
Query:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHI
        MFT+VESGRYITA VISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHI
Subjt:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHI
XP_004152917.1 GTPase-activating protein gyp7 [Cucumis sativus]3.57e-3885.19Show/hide
Query:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
        MF VV SGRYITAPVI+ED QPIHDPLVLL  NPDKGPAVPQDT   DGN DGSRSTPNNNLET KDPKIIQWMLTLH IG
Subjt:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
XP_008463439.1 PREDICTED: TBC1 domain family member 17 [Cucumis melo]1.75e-3986.42Show/hide
Query:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
        MF VV SGRYITAPVI+ED QPIHDPLVLL  NPD GPAVPQDTGP DGN DGSRSTPNNNLET KDPKIIQWMLTLH IG
Subjt:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
XP_038906214.1 GTPase-activating protein GYP7 [Benincasa hispida]3.94e-3683.95Show/hide
Query:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
        MF VV SGRYITAPVI+ED QPIHDPLVLL  NP+KGPAVPQDTGP D NLDGSRST +NNLET KDPKIIQWMLTLH IG
Subjt:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
TrEMBL top hitse value%identityAlignment
A0A0A0L6C5 Rab-GAP TBC domain-containing protein4.6e-3185.19Show/hide
Query:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
        MF VV SGRYITAPVI+ED QPIHDPLVLL  NPDKGPAVPQDT   DGN DGSRSTPNNNLET KDPKIIQWMLTLH IG
Subjt:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
A0A1S3CJA4 TBC1 domain family member 174.1e-3286.42Show/hide
Query:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
        MF VV SGRYITAPVI+ED QPIHDPLVLL  NPD GPAVPQDTGP DGN DGSRSTPNNNLET KDPKIIQWMLTLH IG
Subjt:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
A0A5A7SQ27 TBC1 domain family member 174.7e-3695Show/hide
Query:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHI
        MFTVVESGRYITAPVISEDDQPIHDPLVLL INPDKGP VPQDTGP DGNLDGSRSTPNNNLETAKDPKIIQWMLTLH I
Subjt:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHI
A0A5D3BI26 TBC1 domain family member 176.6e-3897.5Show/hide
Query:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHI
        MFT+VESGRYITA VISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHI
Subjt:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHI
A0A5D3BM65 TBC1 domain family member 174.1e-3286.42Show/hide
Query:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
        MF VV SGRYITAPVI+ED QPIHDPLVLL  NPD GPAVPQDTGP DGN DGSRSTPNNNLET KDPKIIQWMLTLH IG
Subjt:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27100.1 Ypt/Rab-GAP domain of gyp1p superfamily protein5.7e-1044.44Show/hide
Query:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
        MF V+ SGR+ TAPVI+E+ QP +DPLVL  IN             +  N +GS            D KIIQW+LTLH IG
Subjt:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
AT4G27100.2 Ypt/Rab-GAP domain of gyp1p superfamily protein5.7e-1044.44Show/hide
Query:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
        MF V+ SGR+ TAPVI+E+ QP +DPLVL  IN             +  N +GS            D KIIQW+LTLH IG
Subjt:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIG
AT5G54780.1 Ypt/Rab-GAP domain of gyp1p superfamily protein1.2e-0740.96Show/hide
Query:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLET--AKDPKIIQWMLTLHHIG
        MF V+ SG +ITAPVI+   +PI+DP+VL            Q+T     NL  + S    +L +    D K+IQW+LTLH IG
Subjt:  MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLET--AKDPKIIQWMLTLHHIG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTACCGTCGTTGAAAGTGGTAGATACATCACAGCTCCTGTAATCTCAGAGGATGATCAGCCCATTCATGATCCACTTGTACTCTTGGGAATAAATCCGGACAAAGG
TCCAGCTGTACCTCAAGATACTGGCCCCATCGATGGCAATCTGGATGGTTCACGATCAACTCCTAATAATAATTTGGAAACTGCGAAGGATCCGAAAATAATTCAGTGGA
TGCTTACTTTACATCATATAGGTTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTACCGTCGTTGAAAGTGGTAGATACATCACAGCTCCTGTAATCTCAGAGGATGATCAGCCCATTCATGATCCACTTGTACTCTTGGGAATAAATCCGGACAAAGG
TCCAGCTGTACCTCAAGATACTGGCCCCATCGATGGCAATCTGGATGGTTCACGATCAACTCCTAATAATAATTTGGAAACTGCGAAGGATCCGAAAATAATTCAGTGGA
TGCTTACTTTACATCATATAGGTTGGTAA
Protein sequenceShow/hide protein sequence
MFTVVESGRYITAPVISEDDQPIHDPLVLLGINPDKGPAVPQDTGPIDGNLDGSRSTPNNNLETAKDPKIIQWMLTLHHIGW