CuGenDBv2

Gene ID	IVF0008215
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	embryo defective 3006
Genome location	chr07:18877865..18882542
RNA-Seq Expression	IVF0008215
Synteny	IVF0008215
Gene Ontology terms	GO:0007049 - cell cycle (biological process) GO:0007059 - chromosome segregation (biological process) GO:0051301 - cell division (biological process) GO:0000818 - nuclear MIS12/MIND complex (cellular component)
InterPro domains	IPR007128 - Nuclear MIS12/MIND complex subunit PMF1/Nnf1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7015109.1 hypothetical protein SDJN02_22742 [Cucurbita argyrosperma subsp. argyrosperma]

3.32e-100

81.58

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Query:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV
        M KKHEI TPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVETQ         + QVGLVLDNV
Subjt:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV

Query:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNET
        EQLLEEQDLDPLYSKKTNI+EI+N+LSM K  EIQHLKDMLKTAEEQNR +QGRID+LRKGVQDAS M DAV+KLR+ CR+Y  DGV+ T
Subjt:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNET

XP_008451872.1 PREDICTED: uncharacterized protein LOC103493030 [Cucumis melo]

1.82e-119

93.85

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Query:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV
        MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQV            GLVLDNV
Subjt:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV

Query:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNETLDILN
        EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNETLDILN
Subjt:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNETLDILN

XP_022931290.1 uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata]

9.33e-99

81.05

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Query:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV
        M KKHEI TPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVETQV            GLVLDNV
Subjt:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV

Query:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNET
        EQLLEEQDLDPLYSKKTNI+EI+N+LSM K  EIQHLKDMLKTAEEQNR +QGRID+LRKGVQDAS M DAV+KLR+ CR+Y  DGV+ T
Subjt:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNET

XP_022985332.1 uncharacterized protein LOC111483373 isoform X1 [Cucurbita maxima]

4.42e-97

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Query:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV
        M KKHEI TPV+S QIDLKKSFKLAVRSLLTSCSR EFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVET+V            GLVLDNV
Subjt:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV

Query:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNET
        EQLLEEQDLDPLYSKKTNI+EI+N+LSM K  EIQHLKDMLKTAEEQNR +QGRID+LRKGVQDAS M DAV+KLR+ CR+Y  DGV+ T
Subjt:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNET

XP_038876216.1 uncharacterized protein LOC120068468 [Benincasa hispida]

2.82e-102

83.33

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Query:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV
        M KK EIDTPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFS+FT AEQ+YLHRLFIQVITSLHGNIEDEFESLCVETQV            GLVLDNV
Subjt:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV

Query:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNETLD
        EQLLEEQ+LDPLYSKKTNI+EI+NFLS+ K  EIQHLKDMLKTAEEQNR+IQGRIDVLRKGVQDAS MADAVKKLR  CR+YGTDGVNET D
Subjt:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNETLD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV94 Uncharacterized protein

1.4e-73

86.44

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Query:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV
        MG+KHE+D PV+SRQIDLKKSFKLAVR LLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVET            QVGLV DNV
Subjt:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV

Query:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRS
        EQLLEEQDLDPLYSKKTNIVEI NFLSM K EEIQHLKDMLKTAEEQN VIQGRID LRKGVQDASGMADAVKKLR+
Subjt:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRS

A0A1S3BTB0 uncharacterized protein LOC103493030

6.5e-92

93.85

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Query:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV
        MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVET            QVGLVLDNV
Subjt:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV

Query:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNETLDILN
        EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNETLDILN
Subjt:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNETLDILN

A0A5A7TAS4 Uncharacterized protein

6.5e-92

93.85

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Query:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV
        MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVET            QVGLVLDNV
Subjt:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV

Query:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNETLDILN
        EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNETLDILN
Subjt:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNETLDILN

A0A6J1EZ15 uncharacterized protein LOC111437518 isoform X1

3.8e-76

81.05

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Query:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV
        M KKHEI TPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVET            QVGLVLDNV
Subjt:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV

Query:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNET
        EQLLEEQDLDPLYSKKTNI+EI+N+LSM K  EIQHLKDMLKTAEEQNR +QGRID+LRKGVQDAS M DAV+KLR+ CR+Y  DGV+ T
Subjt:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNET

A0A6J1J4K9 uncharacterized protein LOC111483373 isoform X1

7.2e-75

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Query:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV
        M KKHEI TPV+S QIDLKKSFKLAVRSLLTSCSR EFRECFSRFTTAEQ+YLHRLFIQVITSLHGNIEDEFESLCVET            +VGLVLDNV
Subjt:  MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNV

Query:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNET
        EQLLEEQDLDPLYSKKTNI+EI+N+LSM K  EIQHLKDMLKTAEEQNR +QGRID+LRKGVQDAS M DAV+KLR+ CR+Y  DGV+ T
Subjt:  EQLLEEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNET

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G19350.1 embryo defective 3006

2.7e-34

45.51

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Query:  HEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNVEQLL
        HE D    SR+  LKKSFK  +R LLT+CS+++F + FS+F+ AEQ+ L +L+ +V+ +LH  IE+EF+  C ET            QVG +LD VE+L+
Subjt:  HEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNVEQLL

Query:  EEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSY
        EEQ LDPL+S KT+++ I+  L+  K  EIQ L  +L+ AEEQNR  + RI +L+K  QD SG AD ++KL +    Y
Subjt:  EEQDLDPLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSY

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGGAAGAAGCACGAGATTGATACTCCGGTGACCTCCAGACAGATCGATCTGAAGAAGTCCTTCAAGCTTGCCGTTCGTTCTCTCCTTACTTCATGTTCCAGGGAGGA
GTTTCGGGAATGCTTTTCGAGATTTACGACCGCAGAGCAGGATTATCTTCATCGTCTTTTTATTCAGGTTATAACTTCTCTCCATGGAAACATAGAGGACGAGTTTGAGT
CATTATGTGTTGAAACACAGGTAATGCTCTTGTTTCTGTCAACTTATTATGCCCAGGTGGGACTTGTACTTGATAATGTTGAACAACTTTTGGAAGAGCAAGATCTAGAC
CCATTGTATTCAAAGAAGACCAATATTGTGGAGATATCTAATTTTCTGTCCATGAAAAAGATGGAGGAGATCCAACACTTGAAGGACATGCTAAAAACGGCTGAGGAACA
GAACCGGGTTATTCAAGGCCGTATCGATGTTCTAAGGAAAGGAGTGCAAGATGCCTCGGGCATGGCAGATGCTGTTAAAAAGCTAAGAAGCGAATGCAGATCTTATGGAA
CTGATGGCGTTAATGAGACCTTGGATATACTTAACTGA

mRNA sequence

Show/hide mRNA sequence

CTTTACTCCTCAAATGTTACATAATTCCCACCGGGCTTAAGTTTCAATCTCCCGCTAACTACTTCAGAATTTTCGAACTTCAATTTCTTTGTCAGCTTGCCGTTCGTCTA
TTCGTCGCCGCGAACAGACGGCACTGACCGGGATTTTAGCAACATAGGGTTGGGGATCGTAGTGTACAAAGGCTTTGAAAATGGGGAAGAAGCACGAGATTGATACTCCG
GTGACCTCCAGACAGATCGATCTGAAGAAGTCCTTCAAGCTTGCCGTTCGTTCTCTCCTTACTTCATGTTCCAGGGAGGAGTTTCGGGAATGCTTTTCGAGATTTACGAC
CGCAGAGCAGGATTATCTTCATCGTCTTTTTATTCAGGTTATAACTTCTCTCCATGGAAACATAGAGGACGAGTTTGAGTCATTATGTGTTGAAACACAGGTAATGCTCT
TGTTTCTGTCAACTTATTATGCCCAGGTGGGACTTGTACTTGATAATGTTGAACAACTTTTGGAAGAGCAAGATCTAGACCCATTGTATTCAAAGAAGACCAATATTGTG
GAGATATCTAATTTTCTGTCCATGAAAAAGATGGAGGAGATCCAACACTTGAAGGACATGCTAAAAACGGCTGAGGAACAGAACCGGGTTATTCAAGGCCGTATCGATGT
TCTAAGGAAAGGAGTGCAAGATGCCTCGGGCATGGCAGATGCTGTTAAAAAGCTAAGAAGCGAATGCAGATCTTATGGAACTGATGGCGTTAATGAGACCTTGGATATAC
TTAACTGAAGCTGTTAAATAGCAAGGCCAGTATGTAATTTAGTAGATCATACTCGGGTAGTTATATGTGTCAATTTCCTCAGCTTAGCTCAAGCTTGATATTTACTTCTT
ATTTCATGTCTGCAATTATACATGTTTTACGCTGTGGAACATGTTTTCTTCTGTCTAATGCCTTCAATCTGTCTTGTTGTATCAAAGAATTATTCAATGCCTCATCAAGA
ATTAGCTATGTTGGAGCTCTATATTGCTGTTGTTTTTTCTCCGC

Protein sequence

Show/hide protein sequence

MGKKHEIDTPVTSRQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQDYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLFLSTYYAQVGLVLDNVEQLLEEQDLD
PLYSKKTNIVEISNFLSMKKMEEIQHLKDMLKTAEEQNRVIQGRIDVLRKGVQDASGMADAVKKLRSECRSYGTDGVNETLDILN

IVF0008215 (gene) of Melon (IVF77) v1 genome