; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0008219 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008219
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr10:10879519..10879728
RNA-Seq ExpressionIVF0008219
SyntenyIVF0008219
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050651.1 uncharacterized protein E6C27_scaffold673G001250 [Cucumis melo var. makuwa]2.87e-1488.37Show/hide
Query:  KATSLREKAQQKHDRGFDFREQGGRREGSCERFRVIANKEDEE
        KA S+REKAQQKHDR FDF EQGGRREGSCERFRV+ANKEDEE
Subjt:  KATSLREKAQQKHDRGFDFREQGGRREGSCERFRVIANKEDEE
TrEMBL top hitse value%identityAlignment
A0A5D3C784 Integrase catalytic domain-containing protein4.4e-1174.55Show/hide
Query:  KATSLREKAQQKHDRGFDFREQGGRREGSCERFRVIANKEDEEDLIFVNKEDKQK
        KA S+REKAQQKHDR FDF EQGGRREGSCERFRV+ANKEDEE      KED+ +
Subjt:  KATSLREKAQQKHDRGFDFREQGGRREGSCERFRVIANKEDEEDLIFVNKEDKQK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGACGAAATCTTGGAAGGCGACTTCATTGCGAGAGAAGGCTCAGCAGAAACACGACAGAGGATTTGATTTTCGCGAACAAGGAGGACGAAGAGAAGGTTCGTG
CGAGAGATTTAGGGTGATTGCGAACAAGGAAGACGAAGAGGATTTGATTTTTGTGAACAAGGAGGACAAACAGAAGGTTCGTGCGAGAGATTTAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGACGAAATCTTGGAAGGCGACTTCATTGCGAGAGAAGGCTCAGCAGAAACACGACAGAGGATTTGATTTTCGCGAACAAGGAGGACGAAGAGAAGGTTCGTG
CGAGAGATTTAGGGTGATTGCGAACAAGGAAGACGAAGAGGATTTGATTTTTGTGAACAAGGAGGACAAACAGAAGGTTCGTGCGAGAGATTTAGGGTGA
Protein sequenceShow/hide protein sequence
MGKTKSWKATSLREKAQQKHDRGFDFREQGGRREGSCERFRVIANKEDEEDLIFVNKEDKQKVRARDLG