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IVF0008227 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008227
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTranscription and mRNA export factor ENY2
Genome locationchr03:21743429..21746228
RNA-Seq ExpressionIVF0008227
SyntenyIVF0008227
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006368 - transcription elongation from RNA polymerase II promoter (biological process)
GO:0016578 - histone deubiquitination (biological process)
GO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0045040 - protein insertion into mitochondrial outer membrane (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005643 - nuclear pore (cellular component)
GO:0005742 - mitochondrial outer membrane translocase complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0070390 - transcription export complex 2 (cellular component)
GO:0071819 - DUBm complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0003682 - chromatin binding (molecular function)
InterPro domainsIPR038212 - Transcription factor EnY2 superfamily
IPR018783 - Transcription factor, enhancer of yellow 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445505.1 PREDICTED: transcription and mRNA export factor SUS1 isoform X2 [Cucumis melo]9.34e-5597.78Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV
        MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR  V
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV

XP_011657386.1 transcription and mRNA export factor ENY2 [Cucumis sativus]9.34e-5597.78Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV
        MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR  V
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV

XP_016899913.1 PREDICTED: transcription and mRNA export factor SUS1 isoform X1 [Cucumis melo]2.28e-8699.22Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPS
        MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPS
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPS

Query:  YILSCLCKPVRFLCSPHSSQLLSHIFKVR
        YILSCLCKPVRFLCSPHSSQLLS IFKVR
Subjt:  YILSCLCKPVRFLCSPHSSQLLSHIFKVR

XP_022951096.1 transcription and mRNA export factor SUS1 [Cucurbita moschata]1.80e-5294.44Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV
        MR SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR  V
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV

XP_038884208.1 transcription and mRNA export factor ENY2 [Benincasa hispida]1.55e-5395.56Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV
        MRASINRPPTPEPEDDREH PTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR  V
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV

TrEMBL top hitse value%identityAlignment
A0A0A0KIM7 Transcription and mRNA export factor ENY22.0e-4197.78Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV
        MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR  V
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV

A0A1S3BDR5 Transcription and mRNA export factor ENY22.0e-4197.78Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV
        MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR  V
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV

A0A1S4DVB5 Transcription and mRNA export factor ENY26.9e-6699.22Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPS
        MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPS
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPS

Query:  YILSCLCKPVRFLCSPHSSQLLSHIFKVR
        YILSCLCKPVRFLCSPHSSQLLS IFKVR
Subjt:  YILSCLCKPVRFLCSPHSSQLLSHIFKVR

A0A6J1GGQ4 Transcription and mRNA export factor ENY21.1e-3994.44Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV
        MR SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR  V
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV

A0A6J1KQ41 Transcription and mRNA export factor ENY21.1e-3994.44Show/hide
Query:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV
        MR SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGR  V
Subjt:  MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV

SwissProt top hitse value%identityAlignment
Q3ZBJ0 Transcription and mRNA export factor ENY21.5e-1750Show/hide
Query:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSS
        +IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGR  V        P  +   L + +R   + H+S
Subjt:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSS

Q6DH42 Transcription and mRNA export factor ENY21.5e-1748.94Show/hide
Query:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSS
        +IN KLIE GE+ERLKELLR +LIECGW+D++KALC+  +++KG  NV+V+DLV  +TPKGR  V        P  +   L + +R   + HS+
Subjt:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSS

Q6NQ54 Transcription and mRNA export factor ENY25.7e-2557.45Show/hide
Query:  MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV
        M+ S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGR  V
Subjt:  MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV

Q9JIX0 Transcription and mRNA export factor ENY21.5e-1750Show/hide
Query:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSS
        +IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGR  V        P  +   L + +R   + H+S
Subjt:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSS

Q9NPA8 Transcription and mRNA export factor ENY21.5e-1750Show/hide
Query:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSS
        +IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGR  V        P  +   L + +R   + H+S
Subjt:  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPVRFLCSPHSS

Arabidopsis top hitse value%identityAlignment
AT3G27100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).4.0e-2657.45Show/hide
Query:  MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV
        M+ S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGR  V
Subjt:  MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEV

AT3G27100.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).3.6e-2756Show/hide
Query:  MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSV
        M+ S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRG++    SV
Subjt:  MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGCTTCTATTAATCGGCCTCCGACGCCTGAACCGGAGGATGATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGCTGATTGAAAGTGGTGAGAA
AGAGCGGCTGAAAGAGCTCTTGAGAGAGAGGCTCATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTCTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTTA
GTGTTGATGACCTCGTGCAGGTCATTACTCCAAAAGGCAGAGGTGAGGTGCAACCAACTCTATCTGTATACAAACCCAGTTACATTCTGTCCTGCCTCTGTAAGCCTGTA
AGATTCCTGTGCTCACCACATTCCTCACAGCTATTATCCCATATTTTTAAAGTACGGTGA
mRNA sequenceShow/hide mRNA sequence
GTCGTCTCCAGTCAGCTGTTCCTCGCGGTGTAGTTGGACGCGCTGTGTCGCCGTGAAAGTGAAATTTTTTCAACAACAATCTCTAACCATAATCTTTGATAATTGAATGA
GGGCTTCTATTAATCGGCCTCCGACGCCTGAACCGGAGGATGATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGCTGATTGAAAGTGGTGAGAAAGAG
CGGCTGAAAGAGCTCTTGAGAGAGAGGCTCATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTCTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTTAGTGT
TGATGACCTCGTGCAGGTCATTACTCCAAAAGGCAGAGGTGAGGTGCAACCAACTCTATCTGTATACAAACCCAGTTACATTCTGTCCTGCCTCTGTAAGCCTGTAAGAT
TCCTGTGCTCACCACATTCCTCACAGCTATTATCCCATATTTTTAAAGTACGGTGATTTAGAGTAATCAAATTAGAGGACTCCTGTGCCAATGTATGCGAGATCATCGGG
GGATTTAGTGCAAGTCTAATCCCCTCAACTTTGTGTTCTTTATATATATCTATATTATATAAGTTGTAACTATACCAATACCAGTAGCTAACCCAGTGATAAAAATGTCA
TCTAGTCCCTCTAGACCCAGGTTCAAGTCACACTACTTACATTCTTTTTTCAAATTAATTTTACTGAACTACAAAGCCCCCGTAAAAAAAAATTCTGGATCCACAGCTGT
ATGAGATTATAGCTATCAGTCTAATATAAAAAGTCAACAACAATAGGAGCCTTTACATTGGAAGAATTCCTTTACATCAAATCAAATTATAAGGAGTCAAATCGGATGTT
ATGACTCCGAGAATGACTGATAATTAAAAATATATTAACTAAAACATTTTGCACAAAACAATAGACCAATAATATAACCGATGACTCAATGAGTTATGCTTGGTTGATAG
AAAGTAGTCACGAATGATTCAAAGCTCATGCAAATTTCATTTCTTATAAATTGTTAAGGTGAATTCCTGTTATATATGCAGTCTGTATTCGTATGTGTGTCATTGTTGAG
GAATATTCTGAATATGAGTCAGTAAGAACTTAGAAAAAACTCACTTTTACTCCTGGCGAAGTTTGATTTTCACACTCTTCCACAGAACCGGCTTAACACAATAGAGAAAG
AATTGAAGTCATTAAGGGGTTTTGAGTTCTCATGAGGGACACTCCCAACAATTTAAACTTGCATCCATTATGTTACAACCCATTACGATTTTTTAAACTGCACCCAAAGA
ACCAACCACAAGAGGAGACTTCCATAGCCATTTTGCCAATTAAACCTCCGTAGTCCATTTTGTTCCGGTTGATTTTTGTGTTATTCACATTTGAAAAGTTTTCTTATGAA
GGTGAATTGCTCACCACGT
Protein sequenceShow/hide protein sequence
MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRGEVQPTLSVYKPSYILSCLCKPV
RFLCSPHSSQLLSHIFKVR