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IVF0008243 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008243
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr06:15342623..15349693
RNA-Seq ExpressionIVF0008243
SyntenyIVF0008243
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056045.1 Receptor-like protein 12 [Cucumis melo var. makuwa]3.27e-2850Show/hide
Query:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDHVSLKQPQKPMFDENI
        M  EETI +FNVRV+DFA ESFALGE I ++KMV KVL SL  +FNMKVT I+EAND+TSMKL     DELFG L+ + LS+   +  K+ +        
Subjt:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDHVSLKQPQKPMFDENI

Query:  AEVVGLLSRRFAKFKSKFYKIIRNNNNQSNREPSDVSY
         +VV     RF KFK+KFYK    N  Q NR+ ++ ++
Subjt:  AEVVGLLSRRFAKFKSKFYKIIRNNNNQSNREPSDVSY

KAA0057162.1 Receptor-like protein 12 [Cucumis melo var. makuwa]3.54e-8258.68Show/hide
Query:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDHV--------------
        MVEEETI +FNV+V+D  NESFAL E IPESKMV  V+ SL ++FNMKVT IE+ANDIT+MKL      ELFG LRTF+LSFDDH               
Subjt:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDHV--------------

Query:  -SLKQPQKPMFDENIAEVVGLLSRRFAKFKSKFYKIIRNNNNQSNREPSDVSYS--------GFWIIKRYEETTLDSECKEQGKALVSCIVRESKKEFKH
         SLK PQKP  DEN+ E + LLSRRF KFKSKFYK  RNN+NQ NREPSD SYS         F   ++ +ETT DS+ +EQ +AL+SC V E + E + 
Subjt:  -SLKQPQKPMFDENIAEVVGLLSRRFAKFKSKFYKIIRNNNNQSNREPSDVSYS--------GFWIIKRYEETTLDSECKEQGKALVSCIVRESKKEFKH

Query:  DIYVTSVNADVELQREACESQNNKESEFSLANFNELICLWKK
        D YVT  N + ELQ E CESQ NKESEFSLA+FNEL+CLW +
Subjt:  DIYVTSVNADVELQREACESQNNKESEFSLANFNELICLWKK

KAA0060354.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.78e-31100Show/hide
Query:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKL
        MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKL
Subjt:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKL

TYK19673.1 Receptor-like protein 12 [Cucumis melo var. makuwa]3.92e-3158.33Show/hide
Query:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDHVSLKQPQKPMFDENI
        M ++ET  EFNV V+D ANE FALGE I E KMV KVL SL  +F+MKVTTIEEANDIT+MKL     DELFGLL  FKLSF+D                
Subjt:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDHVSLKQPQKPMFDENI

Query:  AEVVGLLSRRFAKFKSKFYK
         + V LLS+RF KFK+KFYK
Subjt:  AEVVGLLSRRFAKFKSKFYK

TYK27731.1 Receptor-like protein 12 [Cucumis melo var. makuwa]2.32e-2849.28Show/hide
Query:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDHVSLKQPQKPMFDENI
        M  EETI +FNVRVLDFA ESFALGE I ++KMV KVL SL  +FNMKVT I+EAND+TSMKL     DELFG L+ + LS+   +  K+ +  +  +  
Subjt:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDHVSLKQPQKPMFDENI

Query:  AEVVGLLSRRFAKFKSKFYKIIRNNNNQSNREPSDVSY
                 RF KFK+KFYK    N  Q NR+ ++ ++
Subjt:  AEVVGLLSRRFAKFKSKFYKIIRNNNNQSNREPSDVSY

TrEMBL top hitse value%identityAlignment
A0A5A7SVR1 Gag-proteinase polyprotein6.1e-2249.34Show/hide
Query:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDH-------VSLKQPQK
        M EEETI EFNVRVLD ANES AL E + +SK+V KVL SL  KFNMKVTTIEEAND++ MK     LDE FG LRTF+L   D        ++L   ++
Subjt:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDH-------VSLKQPQK

Query:  PMFDEN--------IAEVVGLLSRRFAKFKSKFYKIIRNNNNQSNREPSDVS
           +EN        +AE + LL+++ AK KS+F+K I +  N  NRE + V+
Subjt:  PMFDEN--------IAEVVGLLSRRFAKFKSKFYKIIRNNNNQSNREPSDVS

A0A5A7TGK3 Gag-pol polyprotein1.0e-2148.59Show/hide
Query:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDHVSLKQP---------
        M EEETI EFNV VLD ANE   LGE + +SK+V KVL SL +KFNMKVT IEEAND++ MK     LDELFG LRTF+L   D+ S ++P         
Subjt:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDHVSLKQP---------

Query:  ------QKPMFDENIAEVVGLLSRRFAKFKSKFYKIIRNNNN
              +    ++++ E V LL+++ AK KS+F+K I N  N
Subjt:  ------QKPMFDENIAEVVGLLSRRFAKFKSKFYKIIRNNNN

A0A5A7UMS9 Receptor-like protein 122.2e-6458.68Show/hide
Query:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDH---------------
        MVEEETI +FNV+V+D  NESFAL E IPESKMV  V+ SL ++FNMKVT IE+ANDIT+MK     L ELFG LRTF+LSFDDH               
Subjt:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDH---------------

Query:  VSLKQPQKPMFDENIAEVVGLLSRRFAKFKSKFYKIIRNNNNQSNREPSDVSYS--------GFWIIKRYEETTLDSECKEQGKALVSCIVRESKKEFKH
         SLK PQKP  DEN+ E + LLSRRF KFKSKFYK  RNN+NQ NREPSD SYS         F   ++ +ETT DS+ +EQ +AL+SC V E + E + 
Subjt:  VSLKQPQKPMFDENIAEVVGLLSRRFAKFKSKFYKIIRNNNNQSNREPSDVSYS--------GFWIIKRYEETTLDSECKEQGKALVSCIVRESKKEFKH

Query:  DIYVTSVNADVELQREACESQNNKESEFSLANFNELICLWKK
        D YVT  N + ELQ E CESQ NKESEFSLA+FNEL+CLW +
Subjt:  DIYVTSVNADVELQREACESQNNKESEFSLANFNELICLWKK

A0A5A7UZ81 Gag-pol polyprotein6.5e-24100Show/hide
Query:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKL
        MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKL
Subjt:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKL

A0A5D3D849 Receptor-like protein 124.2e-2358.33Show/hide
Query:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDHVSLKQPQKPMFDENI
        M ++ET  EFNV V+D ANE FALGE I E KMV KVL SL  +F+MKVTTIEEANDIT+MK     LDELFGLL  FKLSF+D                
Subjt:  MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDHVSLKQPQKPMFDENI

Query:  AEVVGLLSRRFAKFKSKFYK
         + V LLS+RF KFK+KFYK
Subjt:  AEVVGLLSRRFAKFKSKFYK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAGGAAGAGACTATTGTAGAGTTCAACGTAAGAGTTTTGGATTTTGCTAATGAATCATTTGCGCTGGGAGAAAATATCCCTGAATCCAAAATGGTATCGAAAGT
GTTAGGATCGCTACTTACTAAATTCAACATGAAGGTTACAACCATTGAAGAAGCGAATGACATTACATCTATGAAGCTAGGTATCTTTCAGCTAGATGAATTGTTTGGAT
TACTACGAACCTTTAAGCTATCTTTTGATGATCATGTCTCTTTAAAGCAACCTCAGAAGCCCATGTTTGATGAAAACATTGCAGAAGTTGTTGGATTACTTTCTCGACGA
TTTGCTAAATTCAAGAGCAAGTTCTACAAAATAATTAGAAATAATAATAATCAATCCAATCGGGAGCCTAGTGATGTAAGTTATTCTGGATTTTGGATCATCAAACGTTA
TGAGGAGACCACTTTAGATAGTGAATGTAAAGAACAAGGGAAAGCCTTAGTCAGCTGCATAGTTAGAGAAAGTAAAAAAGAGTTTAAACATGACATCTATGTTACATCAG
TCAATGCCGATGTTGAGTTGCAAAGAGAGGCATGTGAAAGTCAGAATAACAAGGAATCAGAATTCTCCCTCGCTAATTTCAATGAACTCATATGTTTGTGGAAAAAAGAT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAGGAAGAGACTATTGTAGAGTTCAACGTAAGAGTTTTGGATTTTGCTAATGAATCATTTGCGCTGGGAGAAAATATCCCTGAATCCAAAATGGTATCGAAAGT
GTTAGGATCGCTACTTACTAAATTCAACATGAAGGTTACAACCATTGAAGAAGCGAATGACATTACATCTATGAAGCTAGGTATCTTTCAGCTAGATGAATTGTTTGGAT
TACTACGAACCTTTAAGCTATCTTTTGATGATCATGTCTCTTTAAAGCAACCTCAGAAGCCCATGTTTGATGAAAACATTGCAGAAGTTGTTGGATTACTTTCTCGACGA
TTTGCTAAATTCAAGAGCAAGTTCTACAAAATAATTAGAAATAATAATAATCAATCCAATCGGGAGCCTAGTGATGTAAGTTATTCTGGATTTTGGATCATCAAACGTTA
TGAGGAGACCACTTTAGATAGTGAATGTAAAGAACAAGGGAAAGCCTTAGTCAGCTGCATAGTTAGAGAAAGTAAAAAAGAGTTTAAACATGACATCTATGTTACATCAG
TCAATGCCGATGTTGAGTTGCAAAGAGAGGCATGTGAAAGTCAGAATAACAAGGAATCAGAATTCTCCCTCGCTAATTTCAATGAACTCATATGTTTGTGGAAAAAAGAT
TAG
Protein sequenceShow/hide protein sequence
MVEEETIVEFNVRVLDFANESFALGENIPESKMVSKVLGSLLTKFNMKVTTIEEANDITSMKLGIFQLDELFGLLRTFKLSFDDHVSLKQPQKPMFDENIAEVVGLLSRR
FAKFKSKFYKIIRNNNNQSNREPSDVSYSGFWIIKRYEETTLDSECKEQGKALVSCIVRESKKEFKHDIYVTSVNADVELQREACESQNNKESEFSLANFNELICLWKKD