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IVF0008244 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008244
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr08:10070787..10071179
RNA-Seq ExpressionIVF0008244
SyntenyIVF0008244
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035247.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.65e-4567.97Show/hide
Query:  MGPISPLDSLIHSENNHGQESINNKTKTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSPKYTSD
        MGPISPLDS++ SENNHGQ+S+NN+TKT A+GE  NQT+++KEG +  H K  PS++TT GI KD   + E E D+AFKEKLV WLKENELKLSPKYT+D
Subjt:  MGPISPLDSLIHSENNHGQESINNKTKTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSPKYTSD

Query:  IASSSNFPVIMSDQNVDLSSHGPLGDKG
        + SSS FPV++SDQN DLS HGPLGDKG
Subjt:  IASSSNFPVIMSDQNVDLSSHGPLGDKG

KAA0056838.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.19e-3657.14Show/hide
Query:  MGPISPLDSLIHSENNHGQESINNKT-----KTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSP
        MGPISPL+S+I SENNHG +++NN+T     K+    E  N T ++KEG +   Q    S++T  G  KD     E E D+AFKEKLV WLKENELKLSP
Subjt:  MGPISPLDSLIHSENNHGQESINNKT-----KTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSP

Query:  KYTSDIASSSNFPVIMSDQNVDLSSHGPLGDKG
        KYT+D+ SSS+FPVI+SDQN+D++ HGPLGDKG
Subjt:  KYTSDIASSSNFPVIMSDQNVDLSSHGPLGDKG

KAA0057507.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.51e-3557.14Show/hide
Query:  MGPISPLDSLIHSENNHGQESINNKT-----KTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSP
        MGPISPL+S+I SENNHG ++ NN+T     K+    E  N T ++KEG +   Q    S++T  G  KD     E E D+AFKEKLV WLKENELKLSP
Subjt:  MGPISPLDSLIHSENNHGQESINNKT-----KTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSP

Query:  KYTSDIASSSNFPVIMSDQNVDLSSHGPLGDKG
        KYT+D+ SSS FPVI+SDQN+D++ HGPLGDKG
Subjt:  KYTSDIASSSNFPVIMSDQNVDLSSHGPLGDKG

TYK04225.1 hypothetical protein E5676_scaffold24967G00330 [Cucumis melo var. makuwa]1.97e-80100Show/hide
Query:  MGPISPLDSLIHSENNHGQESINNKTKTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSPKYTSD
        MGPISPLDSLIHSENNHGQESINNKTKTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSPKYTSD
Subjt:  MGPISPLDSLIHSENNHGQESINNKTKTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSPKYTSD

Query:  IASSSNFPVIMSDQNVDLSSHGPLGDKGNT
        IASSSNFPVIMSDQNVDLSSHGPLGDKGNT
Subjt:  IASSSNFPVIMSDQNVDLSSHGPLGDKGNT

TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.51e-3557.14Show/hide
Query:  MGPISPLDSLIHSENNHGQESINNKT-----KTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSP
        MGPISPL+S+I SENNHG ++ NN+T     K+    E  N T ++KEG +   Q    S++T  G  KD     E E D+AFKEKLV WLKENELKLSP
Subjt:  MGPISPLDSLIHSENNHGQESINNKT-----KTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSP

Query:  KYTSDIASSSNFPVIMSDQNVDLSSHGPLGDKG
        KYT+D+ SSS FPVI+SDQN+D++ HGPLGDKG
Subjt:  KYTSDIASSSNFPVIMSDQNVDLSSHGPLGDKG

TrEMBL top hitse value%identityAlignment
A0A5A7US62 LINE-1 retrotransposable element ORF2 protein1.5e-2857.14Show/hide
Query:  MGPISPLDSLIHSENNHGQESINNKT-----KTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSP
        MGPISPL+S+I SENNHG ++ NN+T     K+    E  N T ++KEG +   Q    S++T  G  KD     E E D+AFKEKLV WLKENELKLSP
Subjt:  MGPISPLDSLIHSENNHGQESINNKT-----KTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSP

Query:  KYTSDIASSSNFPVIMSDQNVDLSSHGPLGDKG
        KYT+D+ SSS FPVI+SDQN+D++ HGPLGDKG
Subjt:  KYTSDIASSSNFPVIMSDQNVDLSSHGPLGDKG

A0A5D3BKT8 LINE-1 retrotransposable element ORF2 protein2.3e-2957.14Show/hide
Query:  MGPISPLDSLIHSENNHGQESINNKT-----KTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSP
        MGPISPL+S+I SENNHG +++NN+T     K+    E  N T ++KEG +   Q    S++T  G  KD     E E D+AFKEKLV WLKENELKLSP
Subjt:  MGPISPLDSLIHSENNHGQESINNKT-----KTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSP

Query:  KYTSDIASSSNFPVIMSDQNVDLSSHGPLGDKG
        KYT+D+ SSS+FPVI+SDQN+D++ HGPLGDKG
Subjt:  KYTSDIASSSNFPVIMSDQNVDLSSHGPLGDKG

A0A5D3BYJ0 Uncharacterized protein1.3e-64100Show/hide
Query:  MGPISPLDSLIHSENNHGQESINNKTKTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSPKYTSD
        MGPISPLDSLIHSENNHGQESINNKTKTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSPKYTSD
Subjt:  MGPISPLDSLIHSENNHGQESINNKTKTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSPKYTSD

Query:  IASSSNFPVIMSDQNVDLSSHGPLGDKGNT
        IASSSNFPVIMSDQNVDLSSHGPLGDKGNT
Subjt:  IASSSNFPVIMSDQNVDLSSHGPLGDKGNT

A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein1.5e-2857.14Show/hide
Query:  MGPISPLDSLIHSENNHGQESINNKT-----KTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSP
        MGPISPL+S+I SENNHG ++ NN+T     K+    E  N T ++KEG +   Q    S++T  G  KD     E E D+AFKEKLV WLKENELKLSP
Subjt:  MGPISPLDSLIHSENNHGQESINNKT-----KTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSP

Query:  KYTSDIASSSNFPVIMSDQNVDLSSHGPLGDKG
        KYT+D+ SSS FPVI+SDQN+D++ HGPLGDKG
Subjt:  KYTSDIASSSNFPVIMSDQNVDLSSHGPLGDKG

A0A5D3DFM9 LINE-1 retrotransposable element ORF2 protein2.3e-3767.97Show/hide
Query:  MGPISPLDSLIHSENNHGQESINNKTKTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSPKYTSD
        MGPISPLDS++ SENNHGQ+S+NN+TKT A+GE  NQT+++KEG +  H K  PS++TT GI KD   + E E D+AFKEKLV WLKENELKLSPKYT+D
Subjt:  MGPISPLDSLIHSENNHGQESINNKTKTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSPKYTSD

Query:  IASSSNFPVIMSDQNVDLSSHGPLGDKG
        + SSS FPV++SDQN DLS HGPLGDKG
Subjt:  IASSSNFPVIMSDQNVDLSSHGPLGDKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCCCATTTCTCCTTTGGACTCTTTGATTCACTCAGAAAACAACCATGGACAGGAATCCATCAACAACAAGACAAAAACAAATGCTGAAGGAGAAAATCCCAATCA
GACAAACACTATAAAAGAAGGAGTAGAGACCATACACCAAAAAGGGATTCCTTCAAAAAACACAACAGCTGGAATATTAAAGGATACAAGCATCGAAGACGAACAGGAAA
ACGACCAAGCTTTCAAGGAAAAATTAGTAAATTGGCTAAAGGAAAACGAACTCAAACTGTCTCCAAAATATACCTCTGATATAGCTAGCTCTTCAAACTTTCCTGTTATT
ATGTCTGATCAAAATGTGGACCTTTCAAGCCATGGGCCACTGGGGGATAAGGGTAATACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCCCATTTCTCCTTTGGACTCTTTGATTCACTCAGAAAACAACCATGGACAGGAATCCATCAACAACAAGACAAAAACAAATGCTGAAGGAGAAAATCCCAATCA
GACAAACACTATAAAAGAAGGAGTAGAGACCATACACCAAAAAGGGATTCCTTCAAAAAACACAACAGCTGGAATATTAAAGGATACAAGCATCGAAGACGAACAGGAAA
ACGACCAAGCTTTCAAGGAAAAATTAGTAAATTGGCTAAAGGAAAACGAACTCAAACTGTCTCCAAAATATACCTCTGATATAGCTAGCTCTTCAAACTTTCCTGTTATT
ATGTCTGATCAAAATGTGGACCTTTCAAGCCATGGGCCACTGGGGGATAAGGGTAATACATGA
Protein sequenceShow/hide protein sequence
MGPISPLDSLIHSENNHGQESINNKTKTNAEGENPNQTNTIKEGVETIHQKGIPSKNTTAGILKDTSIEDEQENDQAFKEKLVNWLKENELKLSPKYTSDIASSSNFPVI
MSDQNVDLSSHGPLGDKGNT