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IVF0008261 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008261
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr02:8299499..8299840
RNA-Seq ExpressionIVF0008261
SyntenyIVF0008261
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049656.1 hypothetical protein E6C27_scaffold163G001250 [Cucumis melo var. makuwa]2.58e-2780.3Show/hide
Query:  KKEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQLQDQKPVSDLELKIDNASARNQTQMD
        ++EEVD  YVFKF+D+FICKPLERGFED FQCQ NLQEMQL+ QK VSDLELKIDNASA NQ QMD
Subjt:  KKEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQLQDQKPVSDLELKIDNASARNQTQMD

KAA0062630.1 hypothetical protein E6C27_scaffold79G001410 [Cucumis melo var. makuwa]2.79e-2157.95Show/hide
Query:  MEETIDDPLQREKEQLPEDVGEK-------------------------KEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQL
        ++E +DDPLQ EKE+LPEDV EK                         +EEVD +YVFKFMDEFICKPLERGFED+FQCQ NLQEMQL
Subjt:  MEETIDDPLQREKEQLPEDVGEK-------------------------KEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQL

KAE8646246.1 hypothetical protein Csa_023826, partial [Cucumis sativus]1.61e-1946.73Show/hide
Query:  MEETIDDPLQREKEQLPEDVGE---------------------------KKEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQLQDQKPVSDLE
        +EE IDDPLQ+EKE + ++VGE                             E VD DY+F F++  +CKP+E GFEDM Q Q NLQEMQL  QK +SDLE
Subjt:  MEETIDDPLQREKEQLPEDVGE---------------------------KKEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQLQDQKPVSDLE

Query:  LKIDNAS
        LK+DNA+
Subjt:  LKIDNAS

TYJ98052.1 hypothetical protein E5676_scaffold369G00020 [Cucumis melo var. makuwa]1.40e-1856.32Show/hide
Query:  MEETIDDPLQREKEQLPEDVGEK-------------------------KEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQ
        ++E +DDPLQ EKE+LPEDV EK                         +EEVD +YVFKFMDEFICK LERGFED+FQCQ NLQEMQ
Subjt:  MEETIDDPLQREKEQLPEDVGEK-------------------------KEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQ

TYK11947.1 hypothetical protein E5676_scaffold177G001300 [Cucumis melo var. makuwa]4.69e-2155.81Show/hide
Query:  MEETIDDPLQREKEQLPEDVGEK-------------------------KEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEM
        M+ETIDDPLQREKE++PEDVGEK                         +EEV  DYVF F+DE+ICKPLERGF+D+FQC+ NLQEM
Subjt:  MEETIDDPLQREKEQLPEDVGEK-------------------------KEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEM

TrEMBL top hitse value%identityAlignment
A0A5A7V5X0 Uncharacterized protein4.4e-1657.95Show/hide
Query:  MEETIDDPLQREKEQLPEDVGEK-------------------------KEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQL
        ++E +DDPLQ EKE+LPEDV EK                         +EEVD +YVFKFMDEFICKPLERGFED+FQCQ NLQEMQL
Subjt:  MEETIDDPLQREKEQLPEDVGEK-------------------------KEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQL

A0A5D3BE51 Uncharacterized protein3.2e-1453.85Show/hide
Query:  MEETIDDPLQREKEQLPEDVGEK-------------------------KEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQLQDQ
        ++E +DDPLQ EKE+LPEDV EK                         +EEVD +YVFKFMDEFICK LERGFED+FQCQ NLQEMQ + +
Subjt:  MEETIDDPLQREKEQLPEDVGEK-------------------------KEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQLQDQ

A0A5D3CJ32 Uncharacterized protein8.4e-1555.81Show/hide
Query:  MEETIDDPLQREKEQLPEDVGEK-------------------------KEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEM
        M+ETIDDPLQREKE++PEDVGEK                         +EEV  DYVF F+DE+ICKPLERGF+D+FQC+ NLQEM
Subjt:  MEETIDDPLQREKEQLPEDVGEK-------------------------KEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEM

A0A5D3D645 Uncharacterized protein5.1e-2079.1Show/hide
Query:  EKKEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQLQDQKPVSDLELKIDNASARNQTQMD
        +++EEVD  YVFKF+D+FICKPLERGFED FQCQ NLQEMQL+ QK VSDLELKIDNASA NQ QMD
Subjt:  EKKEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQLQDQKPVSDLELKIDNASARNQTQMD

A0A5D3DG66 Uncharacterized protein1.3e-1258.82Show/hide
Query:  EDVGEKKEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQLQDQKPVSDLELKIDNASARNQT
        E V E +EE   DYVFKF+D ++CK +ERGFE++ QCQR LQEM L+  K ++DLELK+DNA+A +QT
Subjt:  EDVGEKKEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQLQDQKPVSDLELKIDNASARNQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGACTATTGATGACCCACTCCAAAGGGAAAAGGAACAACTCCCAGAGGATGTTGGCGAGAAAAAAGAAGAAGTTGACACGGACTATGTGTTCAAATTCATGGA
TGAATTTATTTGTAAACCTTTGGAGAGAGGGTTTGAAGACATGTTTCAGTGTCAGAGAAACTTACAAGAGATGCAATTGCAGGATCAAAAGCCAGTAAGCGACTTAGAAC
TTAAAATTGACAACGCGAGTGCAAGAAATCAAACACAAATGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGACTATTGATGACCCACTCCAAAGGGAAAAGGAACAACTCCCAGAGGATGTTGGCGAGAAAAAAGAAGAAGTTGACACGGACTATGTGTTCAAATTCATGGA
TGAATTTATTTGTAAACCTTTGGAGAGAGGGTTTGAAGACATGTTTCAGTGTCAGAGAAACTTACAAGAGATGCAATTGCAGGATCAAAAGCCAGTAAGCGACTTAGAAC
TTAAAATTGACAACGCGAGTGCAAGAAATCAAACACAAATGGATTAA
Protein sequenceShow/hide protein sequence
MEETIDDPLQREKEQLPEDVGEKKEEVDTDYVFKFMDEFICKPLERGFEDMFQCQRNLQEMQLQDQKPVSDLELKIDNASARNQTQMD