CuGenDBv2

Gene ID	IVF0008298
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein FAR1-RELATED SEQUENCE 4
Genome location	chr01:27208896..27209362
RNA-Seq Expression	IVF0008298
Synteny	IVF0008298
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0033561.1 uncharacterized protein E6C27_scaffold261G001160 [Cucumis melo var. makuwa]

1.66e-49

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Query:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME
        MS D SIPKEIVHKARTNLGVNISY+KAWRAKEHMVKILHGD  ESYALIPRFFDKLV+SNP      EMDDSGHFKFCFM FGASIEGWKYCR I+ ++
Subjt:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME

KAA0035384.1 protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa]

1.12e-50

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Query:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME
        MSTD SIPKEIVHKA TNLGVNISYQKAWR KEHMVKILH D+ ESYALIPRFFDKLVESNP      EMDDSGHFKFCFM FGASIEGWKYCR I+ ++
Subjt:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME

KAA0037812.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]

1.16e-50

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Query:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME
        MST+ SIP EIVHKARTNLG+NISYQKAWRAKEHMVKILHGD  ESYALIPRFFDKLVESNP      EMDDSGHFKFCFM FGASIEGWKYC+ I+ ++
Subjt:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME

KAA0064043.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]

3.17e-56

93.75

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Query:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLI
        MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP      EMDDSGHFKFCFMVFGASIEGWKYCRLI
Subjt:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLI

TYK02872.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]

1.25e-51

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Query:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME
        MST+ SIP EIVHKARTNLG+NISYQKAWRAKEHMVKILHGD  ESYALIPRFFDKLVESNP      EMDDSGHFKFCFM FGASIEGWKYC+ I+ ++
Subjt:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SVW4 Uncharacterized protein

3.1e-39

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Query:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME
        MS D SIPKEIVHKARTNLGVNISY+KAWRAKEHMVKILHGD  ESYALIPRFFDKLV+SNP      EMDDSGHFKFCFM FGASIEGWKYCR I+ ++
Subjt:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME

A0A5A7T2W2 Protein FAR1-RELATED SEQUENCE 4

1.8e-39

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Query:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME
        MST+ SIP EIVHKARTNLG+NISYQKAWRAKEHMVKILHGD  ESYALIPRFFDKLVESNP      EMDDSGHFKFCFM FGASIEGWKYC+ I+ ++
Subjt:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME

A0A5A7V7F3 Protein FAR1-RELATED SEQUENCE 4

3.2e-44

91.84

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Query:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILL
        MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP      EMDDSGHFKFCFMVFGASIEGWKYCRLI +
Subjt:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILL

A0A5D3BVN2 Protein FAR1-RELATED SEQUENCE 4

1.8e-39

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Query:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME
        MST+ SIP EIVHKARTNLG+NISYQKAWRAKEHMVKILHGD  ESYALIPRFFDKLVESNP      EMDDSGHFKFCFM FGASIEGWKYC+ I+ ++
Subjt:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME

A0A5D3BZ76 Protein FAR-RED IMPAIRED RESPONSE 1-like

8.2e-40

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Query:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME
        MSTD SIPKEIVHKA TNLGVNISYQKAWR KEHMVKILH D+ ESYALIPRFFDKLVESNP      EMDDSGHFKFCFM FGASIEGWKYCR I+ ++
Subjt:  MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNP------EMDDSGHFKFCFMVFGASIEGWKYCRLILLME

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTCTACTGATCATTCCATTCCTAAAGAGATTGTGCATAAGGCTCGTACAAATCTTGGAGTTAATATAAGTTACCAAAAAGCTTGGAGGGCGAAAGAACATATGGTAAA
GATATTACATGGTGACAGAGCTGAATCGTATGCATTGATTCCAAGATTCTTTGATAAATTGGTTGAATCTAACCCAGAAATGGATGATAGTGGTCATTTCAAATTTTGCT
TTATGGTTTTTGGTGCATCAATTGAGGGGTGGAAATACTGTAGACTTATTTTGTTGATGGAACATTTTTGA

mRNA sequence

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Protein sequence

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MSTDHSIPKEIVHKARTNLGVNISYQKAWRAKEHMVKILHGDRAESYALIPRFFDKLVESNPEMDDSGHFKFCFMVFGASIEGWKYCRLILLMEHF

IVF0008298 (gene) of Melon (IVF77) v1 genome