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IVF0008331 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008331
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L39
Genome locationchr06:11409294..11410343
RNA-Seq ExpressionIVF0008331
SyntenyIVF0008331
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000077 - Ribosomal protein L39e
IPR023626 - Ribosomal protein L39e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB38641.1 60S ribosomal protein L39 [Morus notabilis]7.48e-1470.83Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HK FRIKKKL K+MR N  I H I LR DNTIRY+AK RHW  TKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
KAA0050937.1 60S ribosomal protein L39 [Cucumis melo var. makuwa]7.31e-1470.83Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HK FRIKKKL K+MR N  I H I LR DNTIRY+AK RHW  TKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
XP_004135586.1 60S ribosomal protein L39 [Cucumis sativus]6.98e-1470.83Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HK FRIKKKL K+MR N  I H I LR DNTIRY+AK RHW  TKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
XP_008450199.1 PREDICTED: 60S ribosomal protein L39-1-like [Cucumis melo]2.54e-2695.83Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HKNFRIKKKLTKRM HNG IMHLIHLRNDNTIRYDAKLRHWHCTKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
XP_011033476.1 PREDICTED: 60S ribosomal protein L39-like [Populus euphratica]9.92e-1468.75Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HK FRIKKKL K+MR N  I H I +R DNTIRY+AK RHW  TKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
TrEMBL top hitse value%identityAlignment
A0A0A0LYE1 Uncharacterized protein5.1e-0970.83Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HK FRIKKKL K+MR N  I H I LR DNTIRY+AK RHW  TKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
A0A1S3BCZ7 60S ribosomal protein L395.1e-0970.83Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HK FRIKKKL K+MR N  I H I LR DNTIRY+AK RHW  TKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
A0A1S3BNP7 60S ribosomal protein L39-1-like1.2e-1895.83Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HKNFRIKKKLTKRM HNG IMHLIHLRNDNTIRYDAKLRHWHCTKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
A0A6J1C1Z7 60S ribosomal protein L395.1e-0970.83Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HK FRIKKKL K+MR N  I H I LR DNTIRY+AK RHW  TKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
A0A6J1HZ80 60S ribosomal protein L395.1e-0970.83Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HK FRIKKKL K+MR N  I H I LR DNTIRY+AK RHW  TKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
SwissProt top hitse value%identityAlignment
P51424 60S ribosomal protein L39-19.0e-1168.75Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HK+F IKKKL K+MR N  I H I LR DNTIRY+AK RHW  TKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
P51425 60S ribosomal protein L391.2e-1066.67Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HK FRIKKKL K+MR N  I + I +R DNTIRY+AK RHW  TKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
P51426 60S ribosomal protein L39-21.2e-1066.67Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HK FRIKKKL K+MR N  I + I +R DNTIRY+AK RHW  TKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
Q5SMI4 60S ribosomal protein L39-33.4e-1064.58Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HK F+IKKKL K+MR N  I + I +R DNTIRY+AK RHW  TKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
Q6KAJ8 60S ribosomal protein L39-11.2e-1066.67Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HK FRIKKKL K+MR N  I + I +R DNTIRY+AK RHW  TKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
Arabidopsis top hitse value%identityAlignment
AT2G25210.1 Ribosomal protein L39 family protein7.8e-1069.77Show/hide
Query:  IKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        IKKKL K+MR N  I H I LR DNTIRY+AK RHW  TKLGF
Subjt:  IKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
AT3G02190.1 Ribosomal protein L39 family protein2.0e-1064.58Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HK+F IKKKL K+MR N  I + I LR DN IRY+AK RHW  TKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
AT4G31985.1 Ribosomal protein L39 family protein6.4e-1268.75Show/hide
Query:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF
        HK+F IKKKL K+MR N  I H I LR DNTIRY+AK RHW  TKLGF
Subjt:  HKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACACAAGAATTTTAGAATCAAGAAGAAGCTTACGAAGAGGATGAGGCACAATGGGTTGATCATGCACTTGATCCACCTGAGAAACGACAACACGATTAGATACGA
CGCAAAACTCAGGCATTGGCATTGCACCAAGCTAGGGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTACACAAGAATTTTAGAATCAAGAAGAAGCTTACGAAGAGGATGAGGCACAATGGGTTGATCATGCACTTGATCCACCTGAGAAACGACAACACGATTAGATACGA
CGCAAAACTCAGGCATTGGCATTGCACCAAGCTAGGGTTTTAA
Protein sequenceShow/hide protein sequence
MVHKNFRIKKKLTKRMRHNGLIMHLIHLRNDNTIRYDAKLRHWHCTKLGF