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IVF0008368 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008368
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGypsy/ty3 element polyprotein
Genome locationchr09:4550227..4550663
RNA-Seq ExpressionIVF0008368
SyntenyIVF0008368
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031882.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]5.84e-1288.89Show/hide
Query:  KGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQEKR
        KGFLRTTWS WKV+KEDRLPLPLGGVDLILGMQ +R
Subjt:  KGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQEKR

KAA0036112.1 uncharacterized protein E6C27_scaffold338G00120 [Cucumis melo var. makuwa]4.24e-2255.88Show/hide
Query:  RRGRAQQKGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQEKR--------WKKNPWNEQVLRMEHKKVRTRIKDDYSGVRDGRRARGEVSEGGGESDRG
        R+ +   K FLRTTWS  KV+KEDRLPLPLGGVDLILG+  +R        WK       V    ++      +DDYSGVRDGRR RGEVSEG GESD G
Subjt:  RRGRAQQKGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQEKR--------WKKNPWNEQVLRMEHKKVRTRIKDDYSGVRDGRRARGEVSEGGGESDRG

Query:  VD
        VD
Subjt:  VD

KAA0037609.1 kinesin-13A-like [Cucumis melo var. makuwa]1.41e-1795.45Show/hide
Query:  MRRGRAQQKGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQEKR
        MRRGRAQQKGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQ +R
Subjt:  MRRGRAQQKGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQEKR

KAA0051286.1 uncharacterized protein E6C27_scaffold2143G00450 [Cucumis melo var. makuwa]1.41e-1290.91Show/hide
Query:  KGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQ
        KGFLRTTWS WKV+KEDRLPLPLGGVDLI+GMQ
Subjt:  KGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQ

TrEMBL top hitse value%identityAlignment
A0A5A7SLB5 Gypsy/ty3 element polyprotein7.3e-1081.4Show/hide
Query:  RRGRAQQKGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQEKR
        R+G A  KGFLRTTWS WKV+KEDRLPLPLGGVDLILGMQ +R
Subjt:  RRGRAQQKGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQEKR

A0A5A7SY26 Uncharacterized protein1.2e-1755.88Show/hide
Query:  RRGRAQQKGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQEKR--------WKKNPWNEQVLRMEHKKVRTRIKDDYSGVRDGRRARGEVSEGGGESDRG
        R+ +   K FLRTTWS  KV+KEDRLPLPLGGVDLILG+  +R        WK       V    ++      +DDYSGVRDGRR RGEVSEG GESD G
Subjt:  RRGRAQQKGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQEKR--------WKKNPWNEQVLRMEHKKVRTRIKDDYSGVRDGRRARGEVSEGGGESDRG

Query:  VD
        VD
Subjt:  VD

A0A5A7UAQ5 Uncharacterized protein3.6e-0990.91Show/hide
Query:  KGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQ
        KGFLRTTWS WKV+KEDRLPLPLGGVDLI+GMQ
Subjt:  KGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQ

A0A5D3CC04 Kinesin-13A-like9.8e-1595.45Show/hide
Query:  MRRGRAQQKGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQEKR
        MRRGRAQQKGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQ +R
Subjt:  MRRGRAQQKGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQEKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGAGGAAGGGCCCAACAAAAGGGATTTCTAAGAACTACGTGGTCATCTTGGAAGGTCGTAAAAGAGGACAGATTACCTCTTCCGTTGGGGGGAGTTGATTTGAT
CCTTGGAATGCAAGAAAAAAGATGGAAGAAGAATCCATGGAATGAACAAGTCCTTCGAATGGAGCATAAGAAGGTAAGGACTAGAATTAAAGACGATTATAGCGGAGTTA
GAGATGGTAGAAGAGCAAGGGGAGAGGTCTCAGAAGGAGGAGGAGAGTCCGATAGAGGAGTTGATCGCGAGGTTCTTCTTCGAAAGACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGAGGAAGGGCCCAACAAAAGGGATTTCTAAGAACTACGTGGTCATCTTGGAAGGTCGTAAAAGAGGACAGATTACCTCTTCCGTTGGGGGGAGTTGATTTGAT
CCTTGGAATGCAAGAAAAAAGATGGAAGAAGAATCCATGGAATGAACAAGTCCTTCGAATGGAGCATAAGAAGGTAAGGACTAGAATTAAAGACGATTATAGCGGAGTTA
GAGATGGTAGAAGAGCAAGGGGAGAGGTCTCAGAAGGAGGAGGAGAGTCCGATAGAGGAGTTGATCGCGAGGTTCTTCTTCGAAAGACCTAA
Protein sequenceShow/hide protein sequence
MRRGRAQQKGFLRTTWSSWKVVKEDRLPLPLGGVDLILGMQEKRWKKNPWNEQVLRMEHKKVRTRIKDDYSGVRDGRRARGEVSEGGGESDRGVDREVLLRKT