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IVF0008437 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008437
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRT_RNaseH domain-containing protein
Genome locationchr12:11334752..11335033
RNA-Seq ExpressionIVF0008437
SyntenyIVF0008437
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035429.1 uncharacterized protein E6C27_scaffold285G00480 [Cucumis melo var. makuwa]3.85e-53100Show/hide
Query:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGE
        MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGE
Subjt:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGE

KAA0062402.1 uncharacterized protein E6C27_scaffold154G001950 [Cucumis melo var. makuwa]1.61e-3872.04Show/hide
Query:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL
        M SY+KFLKDILAKK ++NDF+TVAL Q T+D F+NGVP KMTDPRSF +  S G MDLGC L DL ASINLMPL IFKK+ +GEVQPTH+RL
Subjt:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL

TYJ99425.1 uncharacterized protein E5676_scaffold316G00120 [Cucumis melo var. makuwa]7.57e-3875.28Show/hide
Query:  IKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL
        +KFLKDIL KKRKINDF+ VALTQATN+ FKNGVP+KMTDP SFT+ YS G +DLG ALC+L A++NL+PLSIFKK+ IGEVQPTH+RL
Subjt:  IKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL

TYK11898.1 uncharacterized protein E5676_scaffold177G00610 [Cucumis melo var. makuwa]6.40e-3872.04Show/hide
Query:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL
        M  Y+KFLKDILAKKR++N +E VAL+QAT D F NG  EKMTDPRSF +  S GGMDLG A CDLGASINLM LSIFKK+GIGEVQPT + L
Subjt:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL

XP_016902557.1 PREDICTED: uncharacterized protein LOC107991723 [Cucumis melo]3.13e-4073.12Show/hide
Query:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL
        M SY+KFLKDILAKK ++NDF+TVAL Q T+D F+NGVP KMTDPRSF +  S G MDLGC L DLGASINLMPL IFKK+ +GEVQPTH+RL
Subjt:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL

TrEMBL top hitse value%identityAlignment
A0A1S4E2V6 uncharacterized protein LOC1079917235.7e-3073.12Show/hide
Query:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL
        M SY+KFLKDILAKK ++NDF+TVAL Q T+D F+NGVP KMTDPRSF +  S G MDLGC L DLGASINLMPL IFKK+ +GEVQPTH+RL
Subjt:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL

A0A5A7V2G5 Uncharacterized protein4.8e-2972.04Show/hide
Query:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL
        M SY+KFLKDILAKK ++NDF+TVAL Q T+D F+NGVP KMTDPRSF +  S G MDLGC L DL ASINLMPL IFKK+ +GEVQPTH+RL
Subjt:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL

A0A5D3BM69 Uncharacterized protein2.2e-2975.28Show/hide
Query:  IKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL
        +KFLKDIL KKRKINDF+ VALTQATN+ FKNGVP+KMTDP SFT+ YS G +DLG ALC+L A++NL+PLSIFKK+ IGEVQPTH+RL
Subjt:  IKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL

A0A5D3CL71 Uncharacterized protein7.0e-2872.04Show/hide
Query:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL
        M  Y+KFLKDILAKKR++N +E VAL+QAT D F NG  EKMTDPRSF +  S GGMDLG A CDLGASINLM LSIFKK+GIGEVQPT + L
Subjt:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL

A0A5D3DPZ2 Uncharacterized protein8.0e-40100Show/hide
Query:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGE
        MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGE
Subjt:  MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCTACATCAAGTTCCTGAAAGACATCTTGGCAAAGAAGAGGAAGATTAATGATTTTGAGACTGTAGCTCTAACGCAAGCAACAAACGACGACTTTAAGAATGG
AGTGCCAGAGAAGATGACAGATCCTAGAAGCTTCACGGTTTCCTACTCAAAAGGTGGAATGGATTTAGGTTGTGCTCTATGCGACCTTGGGGCAAGCATCAATTTGATGC
CTCTCTCTATCTTCAAGAAAGTAGGGATAGGGGAGGTACAACCAACTCATATAAGGCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCCTACATCAAGTTCCTGAAAGACATCTTGGCAAAGAAGAGGAAGATTAATGATTTTGAGACTGTAGCTCTAACGCAAGCAACAAACGACGACTTTAAGAATGG
AGTGCCAGAGAAGATGACAGATCCTAGAAGCTTCACGGTTTCCTACTCAAAAGGTGGAATGGATTTAGGTTGTGCTCTATGCGACCTTGGGGCAAGCATCAATTTGATGC
CTCTCTCTATCTTCAAGAAAGTAGGGATAGGGGAGGTACAACCAACTCATATAAGGCTTTAA
Protein sequenceShow/hide protein sequence
MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSIFKKVGIGEVQPTHIRL