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IVF0008444 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008444
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-H2 finger protein ATL66
Genome locationchr11:21476515..21476766
RNA-Seq ExpressionIVF0008444
SyntenyIVF0008444
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054520.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]1.56e-54100Show/hide
Query:  MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMWKLWKSFVVS
        MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMWKLWKSFVVS
Subjt:  MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMWKLWKSFVVS

KAA0056167.1 retrotransposon protein [Cucumis melo var. makuwa]6.02e-1757.53Show/hide
Query:  GACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMW
        G  +ETFV+VGSNV GGYEGF   DGN+++IP MYSQGLDM   DIMGT+P  +S+GR        SR  R W
Subjt:  GACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMW

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]8.65e-2062.12Show/hide
Query:  MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKK
        M  C+ETF DVGSN   GYEGFS +DGN+M+IPMMYSQG+DM   DIMGT+P  S+EGR   +  K
Subjt:  MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKK

KAA0061395.1 retrotransposon protein [Cucumis melo var. makuwa]5.18e-1759.42Show/hide
Query:  GACLETFVDVGSNVSGGYEGF-SNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSR
        G  +ETFVDV SNVSG YEG  S +DGNN++IP MYSQGLDM P DIMGT+P  +S  R   ++ K  R
Subjt:  GACLETFVDVGSNVSGGYEGF-SNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSR

TYJ98275.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]4.94e-55100Show/hide
Query:  MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMWKLWKSFVVS
        MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMWKLWKSFVVS
Subjt:  MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMWKLWKSFVVS

TrEMBL top hitse value%identityAlignment
A0A5A7UGY0 RING-H2 finger protein ATL664.2e-40100Show/hide
Query:  MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMWKLWKSFVVS
        MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMWKLWKSFVVS
Subjt:  MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMWKLWKSFVVS

A0A5A7UNI7 Retrotransposon protein7.4e-1357.53Show/hide
Query:  GACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMW
        G  +ETFV+VGSNV GGYEGF   DGN+++IP MYSQGLDM   DIMGT+P  +S+GR        SR  R W
Subjt:  GACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMW

A0A5A7V469 Retrotransposon protein6.7e-1462.12Show/hide
Query:  MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKK
        M  C+ETF DVGSN   GYEGFS +DGN+M+IPMMYSQG+DM   DIMGT+P  S+EGR   +  K
Subjt:  MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKK

A0A5D3BIM9 RING-H2 finger protein ATL664.2e-40100Show/hide
Query:  MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMWKLWKSFVVS
        MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMWKLWKSFVVS
Subjt:  MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMWKLWKSFVVS

A0A5D3CIS8 Retrotransposon protein7.4e-1357.53Show/hide
Query:  GACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMW
        G  +ETFV+VGSNV GGYEGF   DGN+++IP MYSQGLDM   DIMGT+P  +S+GR        SR  R W
Subjt:  GACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCATGCTTAGAGACATTCGTCGATGTAGGGTCAAATGTGTCGGGTGGGTACGAAGGATTTTCCAATGAAGATGGAAACAATATGAAGATCCCTATGATGTACAG
CCAGGGACTTGACATGCCCCCCAAGGACATCATGGGTACACAACCTAGTCACTCGAGTGAGGGTAGACGGGTTCAAGCAGATAAAAAAGGAAGTAGGGAGGCCAGAATGT
GGAAACTGTGGAAATCATTCGTAGTATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCATGCTTAGAGACATTCGTCGATGTAGGGTCAAATGTGTCGGGTGGGTACGAAGGATTTTCCAATGAAGATGGAAACAATATGAAGATCCCTATGATGTACAG
CCAGGGACTTGACATGCCCCCCAAGGACATCATGGGTACACAACCTAGTCACTCGAGTGAGGGTAGACGGGTTCAAGCAGATAAAAAAGGAAGTAGGGAGGCCAGAATGT
GGAAACTGTGGAAATCATTCGTAGTATCATGA
Protein sequenceShow/hide protein sequence
MGACLETFVDVGSNVSGGYEGFSNEDGNNMKIPMMYSQGLDMPPKDIMGTQPSHSSEGRRVQADKKGSREARMWKLWKSFVVS