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IVF0008445 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008445
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr02:4565555..4565794
RNA-Seq ExpressionIVF0008445
SyntenyIVF0008445
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042304.1 uncharacterized protein E6C27_scaffold824G001010 [Cucumis melo var. makuwa]1.07e-2594.34Show/hide
Query:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNV
        MDVPTTRSANRVQGSNEMS NPHNTTE+NVEESMFN+FGQRVVDHRMPINSNV
Subjt:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNV

KAA0047014.1 hypothetical protein E6C27_scaffold230G002160 [Cucumis melo var. makuwa]2.38e-1861.76Show/hide
Query:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKALRAI
        + VP TR ANR Q S ++S NPH++  QNVEESMF+ F QR+ DH MPI S V KRF IERLKAL A+
Subjt:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKALRAI

KAA0054080.1 hypothetical protein E6C27_scaffold1371G00020 [Cucumis melo var. makuwa]4.93e-1965.67Show/hide
Query:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKALRA
        M+V +  SANR QG +EMS NPH+T  QNVEESMFN F QRV DH +PI SNV KR  IER+KAL A
Subjt:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKALRA

TYK27664.1 uncharacterized protein E5676_scaffold93G00280 [Cucumis melo var. makuwa]1.40e-1864.18Show/hide
Query:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKALRA
        M+V +  SANR QG +EMS NPH+T  QNVEESMFN F +RV DH +PI SNV KR  IER+KAL A
Subjt:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKALRA

TYK27665.1 uncharacterized protein E5676_scaffold93G00290 [Cucumis melo var. makuwa]1.67e-3596.88Show/hide
Query:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKA
        MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIER K+
Subjt:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKA

TrEMBL top hitse value%identityAlignment
A0A5A7TFU7 Uncharacterized protein5.0e-1994.34Show/hide
Query:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNV
        MDVPTTRSANRVQGSNEMS NPHNTTE+NVEESMFN+FGQRVVDHRMPINSNV
Subjt:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNV

A0A5A7TVM1 Uncharacterized protein1.2e-1261.76Show/hide
Query:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKALRAI
        + VP TR ANR Q S ++S NPH++  QNVEESMF+ F QR+ DH MPI S V KRF IERLKAL A+
Subjt:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKALRAI

A0A5A7UFQ1 Uncharacterized protein4.1e-1365.67Show/hide
Query:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKALRA
        M+V +  SANR QG +EMS NPH+T  QNVEESMFN F QRV DH +PI SNV KR  IER+KAL A
Subjt:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKALRA

A0A5D3DVY7 Uncharacterized protein9.2e-1364.18Show/hide
Query:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKALRA
        M+V +  SANR QG +EMS NPH+T  QNVEESMFN F +RV DH +PI SNV KR  IER+KAL A
Subjt:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKALRA

A0A5D3DWI1 Uncharacterized protein1.9e-2696.88Show/hide
Query:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKA
        MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIER K+
Subjt:  MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTTCCAACTACTAGGAGTGCTAATAGAGTGCAAGGATCAAATGAGATGTCTTGTAACCCACATAACACTACCGAGCAAAATGTAGAGGAAAGCATGTTTAATTA
CTTCGGTCAGAGAGTAGTTGATCATCGTATGCCCATAAACTCTAATGTGGTCAAGAGGTTTGACATTGAGAGGTTAAAGGCATTGAGAGCAATCATTGAGATAGATGGCC
AATCTAAAAGAAATATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTTCCAACTACTAGGAGTGCTAATAGAGTGCAAGGATCAAATGAGATGTCTTGTAACCCACATAACACTACCGAGCAAAATGTAGAGGAAAGCATGTTTAATTA
CTTCGGTCAGAGAGTAGTTGATCATCGTATGCCCATAAACTCTAATGTGGTCAAGAGGTTTGACATTGAGAGGTTAAAGGCATTGAGAGCAATCATTGAGATAGATGGCC
AATCTAAAAGAAATATTTAA
Protein sequenceShow/hide protein sequence
MDVPTTRSANRVQGSNEMSCNPHNTTEQNVEESMFNYFGQRVVDHRMPINSNVVKRFDIERLKALRAIIEIDGQSKRNI