; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0008484 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008484
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionzinc finger CCCH domain-containing protein 20-like
Genome locationchr07:1556648..1557702
RNA-Seq ExpressionIVF0008484
SyntenyIVF0008484
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591452.1 Zinc finger CCCH domain-containing protein 20, partial [Cucurbita argyrosperma subsp. sororia]5.72e-7948.02Show/hide
Query:  MIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADS----DELDG---------------------------------
        MIGEQSRF HTIQVPPWDP EDHH  G+SSPVF+ GG+DSFIDSFS+IHRYLPSAADS    + +DG                                 
Subjt:  MIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADS----DELDG---------------------------------

Query:  ------------------------------------------------------------------------------QSPRTPVSADSVDGSSRVAHAF
                                                                                      QSPRTPVSADSVDGS R++ AF
Subjt:  ------------------------------------------------------------------------------QSPRTPVSADSVDGSSRVAHAF

Query:  DSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCP------FNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP----------
        DSYF+KGS VTSPTSI+S PPVSPPSDSPPLSPNCP      FNSM  L S   +L++GK KAT PHWG IQLG QN LSPSGSG Y+LP          
Subjt:  DSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCP------FNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP----------

Query:  -------------VESGRDLRAQMYAKLSKDNSVKEM-DSTLTPDVGWVSELLM
                     VESGRDLRA+MYAKLSKDNSVKE  DST TPDVGWVSELLM
Subjt:  -------------VESGRDLRAQMYAKLSKDNSVKEM-DSTLTPDVGWVSELLM

XP_004141305.2 LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 23 [Cucumis sativus]2.32e-10855.56Show/hide
Query:  MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDG------------------------------------
        MMIGEQSRFNHTIQVPPWDPL+DHH+TG+SSPVF++ GVDSFIDSFSSIHRYLPSAADSDELDG                                    
Subjt:  MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDG------------------------------------

Query:  ----------------------------------------------------------------------------------QSPRTPVSADSVDGSSRV
                                                                                          QSPRTPVSADSVDGSSR+
Subjt:  ----------------------------------------------------------------------------------QSPRTPVSADSVDGSSRV

Query:  AHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP------------
        AHAFDSYFSKGSFVTSPTSILST  VSPPSDSPPLSPNCPFNS+NGLVSCMRNLQLGKLKAT PHWGRIQLG QNPLSPS SGLYNLP            
Subjt:  AHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP------------

Query:  -----------VESGRDLRAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM
                   VESGRDLRAQMYAKLSKDNSVKEMD  LTPDVGWVSELLM
Subjt:  -----------VESGRDLRAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM

XP_008452695.1 PREDICTED: zinc finger CCCH domain-containing protein 20-like [Cucumis melo]1.07e-12159.83Show/hide
Query:  MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDG------------------------------------
        MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDG                                    
Subjt:  MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDG------------------------------------

Query:  ----------------------------------------------------------------------------------QSPRTPVSADSVDGSSRV
                                                                                          QSPRTPVSADSVDGSSRV
Subjt:  ----------------------------------------------------------------------------------QSPRTPVSADSVDGSSRV

Query:  AHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP------------
        AHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP            
Subjt:  AHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP------------

Query:  -----------VESGRDLRAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM
                   VESGRDLRAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM
Subjt:  -----------VESGRDLRAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM

XP_023536445.1 zinc finger CCCH domain-containing protein 23-like [Cucurbita pepo subsp. pepo]6.26e-7948.02Show/hide
Query:  MIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADS----DELDG---------------------------------
        MIGEQSRF HTIQVPPWDP EDHH  G+SSPVF+ GG+DSFIDSFS+IHRYLPSAADS    + +DG                                 
Subjt:  MIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADS----DELDG---------------------------------

Query:  ------------------------------------------------------------------------------QSPRTPVSADSVDGSSRVAHAF
                                                                                      QSPRTPVSADSVDGS R++ AF
Subjt:  ------------------------------------------------------------------------------QSPRTPVSADSVDGSSRVAHAF

Query:  DSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCP------FNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP----------
        DSYF+KGS VTSPTSI+S PPVSPPSDSPPLSPNCP      FNSM  L S   +L++GK KAT PHWG IQLG QN LSPSGSG Y+LP          
Subjt:  DSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCP------FNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP----------

Query:  -------------VESGRDLRAQMYAKLSKDNSVKEM-DSTLTPDVGWVSELLM
                     VESGRDLRA+MYAKLSKDNSVKE  DST TPDVGWVSELLM
Subjt:  -------------VESGRDLRAQMYAKLSKDNSVKEM-DSTLTPDVGWVSELLM

XP_038900024.1 zinc finger CCCH domain-containing protein 23-like [Benincasa hispida]7.73e-11255.56Show/hide
Query:  MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDG------------------------------------
        MMIGEQSRFNHTIQVPPWDPLEDHH+TG+SSPVF++GGVDSFIDSFSSIHRYLPSAADSD+LD                                     
Subjt:  MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDG------------------------------------

Query:  ----------------------------------------------------------------------------------QSPRTPVSADSVDGSSRV
                                                                                          QSPRTPVSADSVDGSSR+
Subjt:  ----------------------------------------------------------------------------------QSPRTPVSADSVDGSSRV

Query:  AHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP------------
        AHAFDSYF+KGSFVTSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGK KAT PHWGRIQLG QNPLSPSGSGLY+LP            
Subjt:  AHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP------------

Query:  -----------VESGRDLRAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM
                   VESGRDLRA+MYAKLSKDNSVKE+DST TPDVGWVSELLM
Subjt:  -----------VESGRDLRAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM

TrEMBL top hitse value%identityAlignment
A0A0A0L582 Uncharacterized protein6.7e-10384.55Show/hide
Query:  MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDGQSPRTPVSADSVDGSSRVAHAFDSYFSKGSFVTSPT
        MMIGEQSRFNHTIQVPPWDPL+DHH+TG+SSPVF++ GVDSFIDSFSSIHRYLPSAADSDELDGQSPRTPVSADSVDGSSR+AHAFDSYFSKGSFVTSPT
Subjt:  MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDGQSPRTPVSADSVDGSSRVAHAFDSYFSKGSFVTSPT

Query:  SILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP-----------------------VESGRDL
        SILSTPPVSPPSDSPPLSPNCPFNS+NGLVSCMRNLQLGKLKAT PHWGRIQLG QNPLSPS SGLYNLP                       VESGRDL
Subjt:  SILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP-----------------------VESGRDL

Query:  RAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM
        RAQMYAKLSKDNSVKEMD  LTPDVGWVSELLM
Subjt:  RAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM

A0A1S3BTV6 zinc finger CCCH domain-containing protein 20-like2.7e-9659.83Show/hide
Query:  MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDG------------------------------------
        MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDG                                    
Subjt:  MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDG------------------------------------

Query:  ----------------------------------------------------------------------------------QSPRTPVSADSVDGSSRV
                                                                                          QSPRTPVSADSVDGSSRV
Subjt:  ----------------------------------------------------------------------------------QSPRTPVSADSVDGSSRV

Query:  AHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP------------
        AHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP            
Subjt:  AHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP------------

Query:  -----------VESGRDLRAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM
                   VESGRDLRAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM
Subjt:  -----------VESGRDLRAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM

A0A5D3D9C0 Zinc finger CCCH domain-containing protein 20-like2.7e-9659.83Show/hide
Query:  MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDG------------------------------------
        MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDG                                    
Subjt:  MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDG------------------------------------

Query:  ----------------------------------------------------------------------------------QSPRTPVSADSVDGSSRV
                                                                                          QSPRTPVSADSVDGSSRV
Subjt:  ----------------------------------------------------------------------------------QSPRTPVSADSVDGSSRV

Query:  AHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP------------
        AHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP            
Subjt:  AHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP------------

Query:  -----------VESGRDLRAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM
                   VESGRDLRAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM
Subjt:  -----------VESGRDLRAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM

A0A6J1FFV8 zinc finger CCCH domain-containing protein 20-like6.8e-6347.74Show/hide
Query:  MIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADS----DELDG---------------------------------
        MIGEQSRF HTIQVPPWDP EDHH  G+SSPVF+ GG+DSFIDSFS+IHRYLPSAADS    + +DG                                 
Subjt:  MIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADS----DELDG---------------------------------

Query:  ------------------------------------------------------------------------------QSPRTPVSADSVDGSSRVAHAF
                                                                                      QSPRTPVSADSVDGS R++ AF
Subjt:  ------------------------------------------------------------------------------QSPRTPVSADSVDGSSRVAHAF

Query:  DSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCP------FNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP----------
        DSYF+KGS VTSPTSI+S PPVSPPSDSPPLSPNCP      FNSM  L S   +L++GK KA  PHWG IQLG QN LSPSGSG Y+LP          
Subjt:  DSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCP------FNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP----------

Query:  -------------VESGRDLRAQMYAKLSKDNSVKE-MDSTLTPDVGWVSELLM
                     VESGRDLRA+MYAKLSKDNSVKE  DST TPDVGWVSELLM
Subjt:  -------------VESGRDLRAQMYAKLSKDNSVKE-MDSTLTPDVGWVSELLM

A0A6J1IQE6 zinc finger CCCH domain-containing protein 20-like6.3e-6146.89Show/hide
Query:  MIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADS----DELDG---------------------------------
        MIGEQSRF   IQVPPWDP EDHH  G+SSPVF+ GG+DSFIDSFS+IHRYLPSAADS    + +DG                                 
Subjt:  MIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADS----DELDG---------------------------------

Query:  ------------------------------------------------------------------------------QSPRTPVSADSVDGSSRVAHAF
                                                                                      QSPRTPVSADSVDGS R++ AF
Subjt:  ------------------------------------------------------------------------------QSPRTPVSADSVDGSSRVAHAF

Query:  DSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCP------FNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP----------
        DSYF+KGS VTSPTSI+S PPVSPPSDSPP+SPNCP      FNSM  L S   +L++GK KAT PHWG IQLG QN  SPSGSG Y+LP          
Subjt:  DSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCP------FNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLP----------

Query:  -------------VESGRDLRAQMYAKLSKDNSVKE-MDSTLTPDVGWVSELLM
                     VESGRDLRA+MYAKLSKDNSVKE  DST TPDVGWVSELLM
Subjt:  -------------VESGRDLRAQMYAKLSKDNSVKE-MDSTLTPDVGWVSELLM

SwissProt top hitse value%identityAlignment
O82199 Zinc finger CCCH domain-containing protein 206.0e-0831.63Show/hide
Query:  AADSDELDGQSPRTPVSADSVDG-SSRVAHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPP----LSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGR
        A   D++     ++P   DS D  S  +  AF        F  SP+S  ++PPVSP  DS      LS +   N  N +V+ +RNLQL K+K++      
Subjt:  AADSDELDGQSPRTPVSADSVDG-SSRVAHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPP----LSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGR

Query:  IQLGSQN------------------PLSPSGSGLYNL------------PVESGRDLRAQMYAKLSKDNSVKEMD------STLTPDVGWVSELLM
         Q+G                     P +P+  G  N+             VESGR+LRAQ++ KLSK+N +  ++      +  TPDVGWVS+L+M
Subjt:  IQLGSQN------------------PLSPSGSGLYNL------------PVESGRDLRAQMYAKLSKDNSVKEMD------STLTPDVGWVSELLM

O82307 Zinc finger CCCH domain-containing protein 231.6e-0840Show/hide
Query:  TSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQL--GKLKATGPHWGRIQLGSQNPLSPSGSGLY---------NLP----VESGRDLRAQM
        TSPTSIL +P  SPPS+SPPLSP     S   L++ MR +QL  G    + P    ++L   + L P  +  +           P    VESG++LRA+M
Subjt:  TSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQL--GKLKATGPHWGRIQLGSQNPLSPSGSGLY---------NLP----VESGRDLRAQM

Query:  YAKLSKDNSV
        YA+LS++NS+
Subjt:  YAKLSKDNSV

Q6L4N4 Zinc finger CCCH domain-containing protein 359.9e-1129.9Show/hide
Query:  ADSVDGSSRVAHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCP-----------FNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQ-----
        A+S DGS     AF+SY +K    +SPTS L +PP SPPS+SPPLSP+              + +N +   +R L+LG  ++       +  G Q     
Subjt:  ADSVDGSSRVAHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCP-----------FNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQ-----

Query:  NPLSPSGSGLYNLP-------------------------------------VESGRDLRAQMYAKLSKDNSVK----EMDSTLTPDVGWVSELL
        +P + + + LY+LP                                     VESGR LR +++ +LSK+ +V        + + PDVGWVS+L+
Subjt:  NPLSPSGSGLYNLP-------------------------------------VESGRDLRAQMYAKLSKDNSVK----EMDSTLTPDVGWVSELL

Q9FU27 Zinc finger CCCH domain-containing protein 24.9e-1029.58Show/hide
Query:  RYLPSAADSDELDGQSPRTPVSADSVDGSSRVAHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCPF-----------NSMNGLVSCMRNLQLG
        R LP+   S      SP     A+S DGS     AF+SY +K    +SPTS L +PP SPPS+SPPLSP+              + +N +++  R L+L 
Subjt:  RYLPSAADSDELDGQSPRTPVSADSVDGSSRVAHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPPLSPNCPF-----------NSMNGLVSCMRNLQLG

Query:  KLKAT-GPHWGRIQLGSQNPLSPSGSGLYNLP------------------------------------VESGRDLRAQMYAKLSKDNSVKEMDST-----
        K+K++    W      +      + +GLY+LP                                    VESGR LR +++ +LS+D ++   D+T     
Subjt:  KLKAT-GPHWGRIQLGSQNPLSPSGSGLYNLP------------------------------------VESGRDLRAQMYAKLSKDNSVKEMDST-----

Query:  -LTPDVGWVSELL
         +  DV WVS+L+
Subjt:  -LTPDVGWVSELL

Q9M0G2 Zinc finger CCCH domain-containing protein 496.2e-0530.37Show/hide
Query:  AADSDELDGQSPRTPVSADSVDGSSRVAHAFDSYFSKGSFVTSPTSILSTPPVSPPSDS------PPLSPNCPFNSMNGLVSCMRNLQLGKLKA------
        A   D+L     R+P   DS D SS +           +F  S + +  +PP+SP +DS        LS +    S+N +V   RNLQ   +K+      
Subjt:  AADSDELDGQSPRTPVSADSVDGSSRVAHAFDSYFSKGSFVTSPTSILSTPPVSPPSDS------PPLSPNCPFNSMNGLVSCMRNLQLGKLKA------

Query:  ----TGPHWGRIQLGSQN-PLSPSGSGLYNL-------------PVESGRDLRAQMYAKLSKDNSV----KEMDSTL--TPDVGWVSELLM
              P    +  G Q+ P +P+  G  ++              VESGR+LR +M  KL K+N +    ++ D  L   PDVGWVS+LLM
Subjt:  ----TGPHWGRIQLGSQN-PLSPSGSGLYNL-------------PVESGRDLRAQMYAKLSKDNSV----KEMDSTL--TPDVGWVSELLM

Arabidopsis top hitse value%identityAlignment
AT2G19810.1 CCCH-type zinc finger family protein4.3e-0931.63Show/hide
Query:  AADSDELDGQSPRTPVSADSVDG-SSRVAHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPP----LSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGR
        A   D++     ++P   DS D  S  +  AF        F  SP+S  ++PPVSP  DS      LS +   N  N +V+ +RNLQL K+K++      
Subjt:  AADSDELDGQSPRTPVSADSVDG-SSRVAHAFDSYFSKGSFVTSPTSILSTPPVSPPSDSPP----LSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGR

Query:  IQLGSQN------------------PLSPSGSGLYNL------------PVESGRDLRAQMYAKLSKDNSVKEMD------STLTPDVGWVSELLM
         Q+G                     P +P+  G  N+             VESGR+LRAQ++ KLSK+N +  ++      +  TPDVGWVS+L+M
Subjt:  IQLGSQN------------------PLSPSGSGLYNL------------PVESGRDLRAQMYAKLSKDNSVKEMD------STLTPDVGWVSELLM

AT2G25900.1 Zinc finger C-x8-C-x5-C-x3-H type family protein1.1e-0940Show/hide
Query:  TSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQL--GKLKATGPHWGRIQLGSQNPLSPSGSGLY---------NLP----VESGRDLRAQM
        TSPTSIL +P  SPPS+SPPLSP     S   L++ MR +QL  G    + P    ++L   + L P  +  +           P    VESG++LRA+M
Subjt:  TSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQL--GKLKATGPHWGRIQLGSQNPLSPSGSGLY---------NLP----VESGRDLRAQM

Query:  YAKLSKDNSV
        YA+LS++NS+
Subjt:  YAKLSKDNSV

AT2G25900.2 Zinc finger C-x8-C-x5-C-x3-H type family protein1.1e-0940Show/hide
Query:  TSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQL--GKLKATGPHWGRIQLGSQNPLSPSGSGLY---------NLP----VESGRDLRAQM
        TSPTSIL +P  SPPS+SPPLSP     S   L++ MR +QL  G    + P    ++L   + L P  +  +           P    VESG++LRA+M
Subjt:  TSPTSILSTPPVSPPSDSPPLSPNCPFNSMNGLVSCMRNLQL--GKLKATGPHWGRIQLGSQNPLSPSGSGLY---------NLP----VESGRDLRAQM

Query:  YAKLSKDNSV
        YA+LS++NS+
Subjt:  YAKLSKDNSV

AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein4.4e-0630.37Show/hide
Query:  AADSDELDGQSPRTPVSADSVDGSSRVAHAFDSYFSKGSFVTSPTSILSTPPVSPPSDS------PPLSPNCPFNSMNGLVSCMRNLQLGKLKA------
        A   D+L     R+P   DS D SS +           +F  S + +  +PP+SP +DS        LS +    S+N +V   RNLQ   +K+      
Subjt:  AADSDELDGQSPRTPVSADSVDGSSRVAHAFDSYFSKGSFVTSPTSILSTPPVSPPSDS------PPLSPNCPFNSMNGLVSCMRNLQLGKLKA------

Query:  ----TGPHWGRIQLGSQN-PLSPSGSGLYNL-------------PVESGRDLRAQMYAKLSKDNSV----KEMDSTL--TPDVGWVSELLM
              P    +  G Q+ P +P+  G  ++              VESGR+LR +M  KL K+N +    ++ D  L   PDVGWVS+LLM
Subjt:  ----TGPHWGRIQLGSQN-PLSPSGSGLYNL-------------PVESGRDLRAQMYAKLSKDNSV----KEMDSTL--TPDVGWVSELLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATCGGAGAACAATCTAGATTCAACCACACCATTCAAGTTCCTCCTTGGGACCCACTTGAAGACCATCATATAACCGGAGTTTCCTCGCCGGTTTTCGTTGCCGG
TGGGGTCGATTCATTCATCGACTCTTTTTCCTCCATTCACCGGTACCTACCCTCTGCGGCGGATTCTGATGAATTGGATGGGCAGAGTCCGAGAACCCCTGTTTCGGCTG
ATTCCGTTGATGGGTCATCACGAGTTGCACATGCATTCGATTCATATTTTAGTAAAGGGTCATTTGTGACTTCACCCACTTCAATTCTATCAACGCCGCCTGTATCTCCG
CCTTCTGACTCACCACCCCTATCTCCGAATTGTCCGTTTAATTCAATGAATGGATTGGTCTCGTGTATGCGCAATCTTCAACTTGGGAAATTAAAAGCAACCGGTCCTCA
TTGGGGAAGGATTCAATTAGGATCACAAAACCCTCTCTCTCCCTCCGGCTCTGGTTTGTACAACTTACCAGTGGAATCTGGGAGAGACTTAAGAGCTCAAATGTATGCGA
AACTCAGCAAAGACAACTCTGTGAAGGAGATGGATTCGACATTGACACCCGATGTCGGATGGGTTTCGGAGCTATTAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGATCGGAGAACAATCTAGATTCAACCACACCATTCAAGTTCCTCCTTGGGACCCACTTGAAGACCATCATATAACCGGAGTTTCCTCGCCGGTTTTCGTTGCCGG
TGGGGTCGATTCATTCATCGACTCTTTTTCCTCCATTCACCGGTACCTACCCTCTGCGGCGGATTCTGATGAATTGGATGGGCAGAGTCCGAGAACCCCTGTTTCGGCTG
ATTCCGTTGATGGGTCATCACGAGTTGCACATGCATTCGATTCATATTTTAGTAAAGGGTCATTTGTGACTTCACCCACTTCAATTCTATCAACGCCGCCTGTATCTCCG
CCTTCTGACTCACCACCCCTATCTCCGAATTGTCCGTTTAATTCAATGAATGGATTGGTCTCGTGTATGCGCAATCTTCAACTTGGGAAATTAAAAGCAACCGGTCCTCA
TTGGGGAAGGATTCAATTAGGATCACAAAACCCTCTCTCTCCCTCCGGCTCTGGTTTGTACAACTTACCAGTGGAATCTGGGAGAGACTTAAGAGCTCAAATGTATGCGA
AACTCAGCAAAGACAACTCTGTGAAGGAGATGGATTCGACATTGACACCCGATGTCGGATGGGTTTCGGAGCTATTAATGTGA
Protein sequenceShow/hide protein sequence
MMIGEQSRFNHTIQVPPWDPLEDHHITGVSSPVFVAGGVDSFIDSFSSIHRYLPSAADSDELDGQSPRTPVSADSVDGSSRVAHAFDSYFSKGSFVTSPTSILSTPPVSP
PSDSPPLSPNCPFNSMNGLVSCMRNLQLGKLKATGPHWGRIQLGSQNPLSPSGSGLYNLPVESGRDLRAQMYAKLSKDNSVKEMDSTLTPDVGWVSELLM