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IVF0008487 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008487
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMicrosomal signal peptidase 12 kDa subunit
Genome locationchr10:3895879..3897445
RNA-Seq ExpressionIVF0008487
SyntenyIVF0008487
Gene Ontology termsGO:0006465 - signal peptide processing (biological process)
GO:0045047 - protein targeting to ER (biological process)
GO:0005787 - signal peptidase complex (cellular component)
GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component)
InterPro domainsIPR009542 - Signal peptidase complex subunit Spc1/SPCS1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51679.1 hypothetical protein Csa_009252 [Cucumis sativus]2.78e-7572.77Show/hide
Query:  GRVDVGIHRTAEILCANSSKSGPVNTY----------PIDQILFSSRRSFPSGLHIAVSEFLK------GYCSPSLNFRI---PSCFICLI---LNP---
        GRVDVGIH TAEIL  NSSKSGPVNTY           ID+ILFSSRRSFPSGLHI+VSEF K         S S  F +    S FI  +   ++P   
Subjt:  GRVDVGIHRTAEILCANSSKSGPVNTY----------PIDQILFSSRRSFPSGLHIAVSEFLK------GYCSPSLNFRI---PSCFICLI---LNP---

Query:  WQ--KLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
        WQ  KLAEQLMQ+MLVAFAVVAFLTGYVMGSFR+MILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVV KKKPAKK
Subjt:  WQ--KLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK

XP_004135313.1 probable signal peptidase complex subunit 1 [Cucumis sativus]2.34e-5096.59Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
        QKLAEQLMQ+MLVAFAVVAFLTGYVMGSFR+MILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVV KKKPAKK
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK

XP_008446045.1 PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo]4.96e-52100Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
        QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK

XP_023549840.1 probable signal peptidase complex subunit 1 [Cucurbita pepo subsp. pepo]5.19e-4792.05Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
        QKLAEQ+MQIMLVAFAVVAFLTGYVM SFRMM+LVYAGGV LTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEPVV KKKP KK
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK

XP_038882954.1 probable signal peptidase complex subunit 1 [Benincasa hispida]1.10e-4895.45Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
        QKLAEQLMQIMLVAFAVVAFLTGY+MGSFRMMILVYAGGV LTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVV KKK AKK
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK

TrEMBL top hitse value%identityAlignment
A0A0A0KS09 Uncharacterized protein1.8e-5872.77Show/hide
Query:  GRVDVGIHRTAEILCANSSKSGPVNTY----------PIDQILFSSRRSFPSGLHIAVSEFLK------GYCSPSLNFRI---PSCFICLI---LNP---
        GRVDVGIH TAEIL  NSSKSGPVNTY           ID+ILFSSRRSFPSGLHI+VSEF K         S S  F +    S FI  +   ++P   
Subjt:  GRVDVGIHRTAEILCANSSKSGPVNTY----------PIDQILFSSRRSFPSGLHIAVSEFLK------GYCSPSLNFRI---PSCFICLI---LNP---

Query:  W--QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
        W  QKLAEQLMQ+MLVAFAVVAFLTGYVMGSFR+MILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVV KKKPAKK
Subjt:  W--QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK

A0A1S3BET6 probable signal peptidase complex subunit 12.5e-39100Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
        QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK

A0A5D3CZV6 Putative signal peptidase complex subunit 12.5e-39100Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
        QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK

A0A6J1GX63 probable signal peptidase complex subunit 12.4e-3489.77Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
        QKLAEQ+MQIMLVAFAVVAFLTGYVM SFRMM+LVYAGGV LTTLITVPNWPFFNRHPLKWLDP +AEKYPKPQPQEPV  KKKP KK
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK

A0A6J1KDF1 probable signal peptidase complex subunit 11.8e-3490.91Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
        QKLAEQ+MQIMLVAFAVVAFLTGYVM SFRMM+LVYA GV LTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEPVV KKKP KK
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK

SwissProt top hitse value%identityAlignment
B0FWK4 Signal peptidase complex subunit 16.3e-0840.54Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSLAEKYP
        QKLAEQ+ Q +++  A+V F+ GYV   F   + +   G   + L+T+P WP + RHPLKWL   D    +K P
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSLAEKYP

Q3T134 Signal peptidase complex subunit 14.9e-0840.54Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSLAEKYP
        QKLAEQ+ Q +++  A+V F+ GY+   F   + +   G   + L+T+P WP + RHPLKWL   D S  +K P
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSLAEKYP

Q944J0 Probable signal peptidase complex subunit 11.1e-2368.18Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
        QKL EQLMQI+LV   VVA + GY   SFR M+L+YAGGV LTTL+TVPNWPF+N HPLKWLDPS AEK+PKP+    V SKKK +KK
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK

Q9D958 Signal peptidase complex subunit 16.3e-0843.55Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWL
        QKLAEQ+ Q +++  A+V F+ GYV   F   + +   G   + L+T+P WP + RHPLKWL
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWL

Q9Y6A9 Signal peptidase complex subunit 11.2e-0636.36Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
        QKLAEQ+ Q +++  A+V F+ GYV   F   + +   G   + L+T+P WP + RHPLKWL             QE     KKP ++
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK

Arabidopsis top hitse value%identityAlignment
AT2G22425.1 Microsomal signal peptidase 12 kDa subunit (SPC12)7.7e-2568.18Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
        QKL EQLMQI+LV   VVA + GY   SFR M+L+YAGGV LTTL+TVPNWPF+N HPLKWLDPS AEK+PKP+    V SKKK +KK
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK

AT2G22425.2 Microsomal signal peptidase 12 kDa subunit (SPC12)7.7e-2568.18Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
        QKL EQLMQI+LV   VVA + GY   SFR M+L+YAGGV LTTL+TVPNWPF+N HPLKWLDPS AEK+PKP+    V SKKK +KK
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK

AT4G40042.1 Microsomal signal peptidase 12 kDa subunit (SPC12)1.2e-2570.45Show/hide
Query:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK
        QKLAEQLMQI+L+  AVV+F+ GY   SFRMM+L+YAGGV LTTLIT+PNWP FNRH LKWLDPS AEK+PKPQ    V SKKK + K
Subjt:  QKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTATTGTCGTTTCGGTCGTGTAGATGTGGGGATTCATCGGACGGCTGAGATTTTATGTGCGAATTCTTCCAAATCAGGACCGGTGAATACATACCCAATTGACCA
AATCCTCTTTTCTTCCCGCCGATCATTCCCGTCTGGACTGCACATCGCCGTCTCCGAATTCCTCAAAGGTTACTGCTCTCCCTCTCTCAATTTTCGAATTCCTTCCTGCT
TCATTTGTTTAATTCTAAATCCTTGGCAAAAGCTAGCGGAGCAGTTGATGCAGATTATGTTGGTTGCATTTGCCGTGGTTGCCTTTTTGACTGGCTATGTTATGGGATCA
TTTAGGATGATGATCTTGGTTTACGCTGGCGGTGTGTTTCTCACCACATTAATCACTGTTCCGAATTGGCCTTTCTTCAATCGCCACCCGCTCAAGTGGTTGGATCCTAG
TTTGGCTGAAAAATACCCTAAGCCGCAACCGCAGGAGCCTGTGGTTTCGAAGAAGAAACCTGCTAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCTATTGTCGTTTCGGTCGTGTAGATGTGGGGATTCATCGGACGGCTGAGATTTTATGTGCGAATTCTTCCAAATCAGGACCGGTGAATACATACCCAATTGACCA
AATCCTCTTTTCTTCCCGCCGATCATTCCCGTCTGGACTGCACATCGCCGTCTCCGAATTCCTCAAAGGTTACTGCTCTCCCTCTCTCAATTTTCGAATTCCTTCCTGCT
TCATTTGTTTAATTCTAAATCCTTGGCAAAAGCTAGCGGAGCAGTTGATGCAGATTATGTTGGTTGCATTTGCCGTGGTTGCCTTTTTGACTGGCTATGTTATGGGATCA
TTTAGGATGATGATCTTGGTTTACGCTGGCGGTGTGTTTCTCACCACATTAATCACTGTTCCGAATTGGCCTTTCTTCAATCGCCACCCGCTCAAGTGGTTGGATCCTAG
TTTGGCTGAAAAATACCCTAAGCCGCAACCGCAGGAGCCTGTGGTTTCGAAGAAGAAACCTGCTAAGAAGTAG
Protein sequenceShow/hide protein sequence
MSYCRFGRVDVGIHRTAEILCANSSKSGPVNTYPIDQILFSSRRSFPSGLHIAVSEFLKGYCSPSLNFRIPSCFICLILNPWQKLAEQLMQIMLVAFAVVAFLTGYVMGS
FRMMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK