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IVF0008502 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008502
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibosomal protein
Genome locationchr04:22946054..22948430
RNA-Seq ExpressionIVF0008502
SyntenyIVF0008502
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001911 - Ribosomal protein S21


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048381.1 Ribosomal protein S21 family protein isoform 1 [Cucumis melo var. makuwa]2.44e-3195.59Show/hide
Query:  IERGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR
        ++ GLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR
Subjt:  IERGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR
XP_004149720.1 uncharacterized protein LOC101216913 [Cucumis sativus]2.85e-3088.57Show/hide
Query:  IERGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGV
        +  GLERALTVLQRKMQSSGIERLIKREQ+HHIKNSEKRVLARKTLERKI+S+DLARKLK ILIKKVRG+
Subjt:  IERGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGV
XP_008461813.1 PREDICTED: uncharacterized protein LOC103500324 [Cucumis melo]5.71e-3595.83Show/hide
Query:  IERGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGVNI
        ++ GLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGVNI
Subjt:  IERGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGVNI
XP_022966846.1 uncharacterized protein LOC111466431 [Cucurbita maxima]4.21e-2885.71Show/hide
Query:  IERGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGV
        +   LERA+T LQRKMQSSGIERLIKREQ HHIKNSEKRVLARK LERKIRSQDLARKLK ILIKKVRG+
Subjt:  IERGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGV
XP_022982723.1 uncharacterized protein LOC111481507 [Cucurbita maxima]2.21e-2887.14Show/hide
Query:  IERGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGV
        +   LERALT LQRKMQSSGIERLIKREQ HHIKNSEKRVLARK LERKIRSQDLARKLK ILIKKVRG+
Subjt:  IERGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGV
TrEMBL top hitse value%identityAlignment
A0A0A0LCD1 Uncharacterized protein3.8e-2292.54Show/hide
Query:  GLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGV
        GLERALTVLQRKMQSSGIERLIKREQ+HHIKNSEKRVLARKTLERKI+S+DLARKLK ILIKKVRG+
Subjt:  GLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGV
A0A1S3CG17 uncharacterized protein LOC1035003249.6e-2695.83Show/hide
Query:  IERGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGVNI
        ++ GLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGVNI
Subjt:  IERGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGVNI
A0A5A7U491 Ribosomal protein S21 family protein isoform 12.0e-2395.59Show/hide
Query:  IERGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR
        ++ GLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR
Subjt:  IERGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVR
A0A6J1HQF3 uncharacterized protein LOC1114664311.2e-2090.91Show/hide
Query:  LERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGV
        LERA+T LQRKMQSSGIERLIKREQ HHIKNSEKRVLARK LERKIRSQDLARKLK ILIKKVRG+
Subjt:  LERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGV
A0A6J1J5L6 uncharacterized protein LOC1114815077.1e-2192.42Show/hide
Query:  LERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGV
        LERALT LQRKMQSSGIERLIKREQ HHIKNSEKRVLARK LERKIRSQDLARKLK ILIKKVRG+
Subjt:  LERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26360.1 Ribosomal protein S21 family protein1.7e-1974.24Show/hide
Query:  LERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGV
        L++ALT+LQ+KMQSSG+ERLIK  Q HHIKNSEK+VLARK LER+I+S D ARKL+ ILIKKVRG+
Subjt:  LERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGGGATCCGGGTGAAGGTATTGAAAGGGGTCTAGAGCGGGCACTGACAGTTCTGCAAAGGAAGATGCAATCGAGCGGAATCGAGCGACTGATTAAGCGTGAACA
AATTCATCATATCAAGAATTCCGAGAAACGGGTTTTGGCCAGAAAGACTTTGGAGCGCAAAATTCGATCGCAGGACCTCGCTCGCAAACTCAAAGACATCCTTATAAAGA
AAGTCAGGGGTGTAAACATCTGA
mRNA sequenceShow/hide mRNA sequence
GCCGTTAAACCCTATCTCTCTTCCCAACCTTTTCTCTTTTTCCTTCCTTCCAAGTTTCGACCGTCTTTCACCGCCGCCGCCTCATGTATTTGGCATAACCACCACCTGTC
CTCCATCAACGTAGCCCACTACATCTCCTGTGAGAACGACAAACAGAGGGAAATGAACTCGTTGGCGCGGAACATTTCGTGCTCCATCAGATCTTCGATTCACACCAATT
GTCTACAGTACCAGCAATGGAGGGGGATCCGGGTGAAGGTATTGAAAGGGGTCTAGAGCGGGCACTGACAGTTCTGCAAAGGAAGATGCAATCGAGCGGAATCGAGCGAC
TGATTAAGCGTGAACAAATTCATCATATCAAGAATTCCGAGAAACGGGTTTTGGCCAGAAAGACTTTGGAGCGCAAAATTCGATCGCAGGACCTCGCTCGCAAACTCAAA
GACATCCTTATAAAGAAAGTCAGGGGTGTAAACATCTGACTTTTGCAATATAGTTGGCATTTTGCTCCCTTTTCTTTGGATCCCTTCTTTAACTCTGGATTGGCTGCCTC
TTAGAAGTGCAATTGAAGCTCCTTTATTCAGCAGGATAGCTCCAGTGAGTTTTTTTTTCATCTATATTGCTTTCTATCTATTTTGTATTCTCTTATACAGTGAGCAATTT
TTCATGCCACTATGGATGCTTCCTCAACCCACTCTGACTTCCTCCTTTATCACTTTTTTACCACCTGCACTTTTGTTGGATTTCTGAACTTCGTGTTTTGAAATACTATG
AATGATGTAATGGTCCATATAGCTCATGAG
Protein sequenceShow/hide protein sequence
MEGDPGEGIERGLERALTVLQRKMQSSGIERLIKREQIHHIKNSEKRVLARKTLERKIRSQDLARKLKDILIKKVRGVNI