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IVF0008549 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008549
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr07:15401257..15401859
RNA-Seq ExpressionIVF0008549
SyntenyIVF0008549
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035621.1 retrotransposon protein [Cucumis melo var. makuwa]3.07e-5151.18Show/hide
Query:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS
        MRG +C+GF WN E KCI+ +K+VF++WSHP A GLLN+SF HY+EL YVFG+D ATGGR E+F D+ SN    Y+ +A+ D   + + P MYS GL+MS
Subjt:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS

Query:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVV
        P+D+M TR  R S  RN SS  KRKR G + +   ++ + +EY N+QL++  +  I+Q QDA+ TRQE+V
Subjt:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVV

KAA0044843.1 retrotransposon protein [Cucumis melo var. makuwa]1.54e-5151.18Show/hide
Query:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS
        M G +C+GF WN E KCII +K+VF++WSHP A GLLN+SF HY+EL YVFG+D ATG R E+F D+ SN    Y+  A+ D   + + P MYS GL+MS
Subjt:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS

Query:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVV
        P+D+M TR  R S  RN SS  KRKR G +++   ++ + +EY N+QL++  +  I+QCQDA+ TRQE+V
Subjt:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVV

KAA0048362.1 retrotransposon protein [Cucumis melo var. makuwa]2.76e-5151.18Show/hide
Query:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS
        MRG +C+GF WN E KCI+ +K+VF++WSHP A GLLN+SF HY+EL YVFG+D ATGGR E+F D+ SN    Y+ +A+ D   + + P MYS GL+MS
Subjt:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS

Query:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVV
        P+D+M TR  R S  RN SS  KRKR G + +   ++ + +EY N+QL++  +  I+Q QDA+ TRQE+V
Subjt:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVV

KAA0061395.1 retrotransposon protein [Cucumis melo var. makuwa]1.98e-123100Show/hide
Query:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS
        MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS
Subjt:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS

Query:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVVQ
        PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVVQ
Subjt:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVVQ

KAA0065737.1 retrotransposon protein [Cucumis melo var. makuwa]9.75e-5251.18Show/hide
Query:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS
        MRG +C+GF WN E KCI+ +K+VF++WSHP A GLLN+SF HY+EL YVFG+D ATGGR E+F D+ SN    Y+  A+ D   + + P MYS GL+MS
Subjt:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS

Query:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVV
        P+D+M TR  R S  RN SSE KRKR G + +   ++ + +EY N+QL++  +  I+Q QDA+ TRQ++V
Subjt:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVV

TrEMBL top hitse value%identityAlignment
A0A5A7TMW5 Retrotransposon protein2.0e-4150.88Show/hide
Query:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS
        M G +C+GF WN E KCII +K+VF++WSHP A GLLN+SF HY+EL YVFG+D ATG R E+F D+ SN    Y+  A+ D   + + P MYS GL+MS
Subjt:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS

Query:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVVQ
        P+D+M TR  R S  RN SS  KRKR G +++   ++ + +EY N+QL++  +  I+QCQDA+ TRQE+V+
Subjt:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVVQ

A0A5A7TXU5 Retrotransposon protein3.5e-4150.88Show/hide
Query:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS
        MRG +C+GF WN E KCI+ +K+VF++WSHP A GLLN+SF HY+EL YVFG+D ATGGR E+F D+ SN    Y+ +A+ D   + + P MYS GL+MS
Subjt:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS

Query:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVVQ
        P+D+M TR  R S  RN SS  KRKR G + +   ++ + +EY N+QL++  +  I+Q QDA+ TRQE+V+
Subjt:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVVQ

A0A5A7VF53 Retrotransposon protein1.6e-4150.88Show/hide
Query:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS
        MRG +C+GF WN E KCI+ +K+VF++WSHP A GLLN+SF HY+EL YVFG+D ATGGR E+F D+ SN    Y+  A+ D   + + P MYS GL+MS
Subjt:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS

Query:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVVQ
        P+D+M TR  R S  RN SSE KRKR G + +   ++ + +EY N+QL++  +  I+Q QDA+ TRQ++V+
Subjt:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVVQ

A0A5D3CX17 Retrotransposon protein7.1e-95100Show/hide
Query:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS
        MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS
Subjt:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS

Query:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVVQ
        PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVVQ
Subjt:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVVQ

A0A5D3DPR5 Retrotransposon protein3.5e-4150.88Show/hide
Query:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS
        MRG +C+GF WN E KCI+ +K+VF++WSHP A GLLN+SF HY+EL YVFG+D ATGGR E+F D+ SN    Y+ +A+ D   + + P MYS GL+MS
Subjt:  MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMS

Query:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVVQ
        P+D+M TR  R S  RN SS  KRKR G + +   ++ + +EY N+QL++  +  I+Q QDA+ TRQE+V+
Subjt:  PNDIMGTRPKRASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGGGCTCGTCGTGCAATGGGTTCGAATGGAATTATGAACTGAAGTGCATTATTGTGAAGAAGGATGTGTTCGAGAATTGGAGTCATCCTGTTGCGAACGGCCTCCT
AAACAGATCGTTTCCCCATTACAACGAACTGTGCTATGTCTTTGGGAGAGATTGTGCGACAGGAGGGCGCATAGAGACATTCGTTGATGTCGAGTCGAATGTGTCTGGAT
GGTACGAGGGACTTGCCAGTACTGACGATGGCAACAATATTGAGATCCCTACGATGTACAGTCAGGGACTAGACATGTCGCCTAACGACATAATGGGCACACGACCCAAA
CGTGCAAGTGGCGATAGGAATGCTTCAAGCGAGTTAAAGAGGAAGCGAGGTGGCCAGTCGGTAGAAATTGCGAAAGTCATATGCAGTGTCATGGAATACGTCAATGACCA
ACTTAATCAGAATGTAGATAGGTTGATCATACAATGCCAAGATGCAAGCGCAACACGTCAAGAGGTCGTTCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGGGCTCGTCGTGCAATGGGTTCGAATGGAATTATGAACTGAAGTGCATTATTGTGAAGAAGGATGTGTTCGAGAATTGGAGTCATCCTGTTGCGAACGGCCTCCT
AAACAGATCGTTTCCCCATTACAACGAACTGTGCTATGTCTTTGGGAGAGATTGTGCGACAGGAGGGCGCATAGAGACATTCGTTGATGTCGAGTCGAATGTGTCTGGAT
GGTACGAGGGACTTGCCAGTACTGACGATGGCAACAATATTGAGATCCCTACGATGTACAGTCAGGGACTAGACATGTCGCCTAACGACATAATGGGCACACGACCCAAA
CGTGCAAGTGGCGATAGGAATGCTTCAAGCGAGTTAAAGAGGAAGCGAGGTGGCCAGTCGGTAGAAATTGCGAAAGTCATATGCAGTGTCATGGAATACGTCAATGACCA
ACTTAATCAGAATGTAGATAGGTTGATCATACAATGCCAAGATGCAAGCGCAACACGTCAAGAGGTCGTTCAATAG
Protein sequenceShow/hide protein sequence
MRGSSCNGFEWNYELKCIIVKKDVFENWSHPVANGLLNRSFPHYNELCYVFGRDCATGGRIETFVDVESNVSGWYEGLASTDDGNNIEIPTMYSQGLDMSPNDIMGTRPK
RASGDRNASSELKRKRGGQSVEIAKVICSVMEYVNDQLNQNVDRLIIQCQDASATRQEVVQ