CuGenDBv2

Gene ID	IVF0008573
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	60S ribosomal protein L7a
Genome location	chr10:24564220..24564462
RNA-Seq Expression	IVF0008573
Synteny	IVF0008573
Gene Ontology terms	GO:0000470 - maturation of LSU-rRNA (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR001921 - Ribosomal protein L7A/L8 IPR029064 - 50S ribosomal protein L30e-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0065509.1 60S ribosomal protein L7a-2-like isoform X2 [Cucumis melo var. makuwa]

1.29e-51

100

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Query:  MHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG
        MHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG
Subjt:  MHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG

KAG7035588.1 60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.16e-13

85.37

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Query:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        KQRLK+PP+ NQFTKT DKNLATNLFKMLLKYR EDK+QKR
Subjt:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

KCW83216.1 hypothetical protein EUGRSUZ_B00159 [Eucalyptus grandis]

8.41e-17

56.79

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Query:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKS----------QKRYKWSSAGFLKSFKGNFN-KYDDDNKKWGGG
        +QRLK+PP+ NQFTKT DKNLATNLFKMLLKYR EDK           +   K   +  L++ K NFN KYD+  KKWGGG
Subjt:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKS----------QKRYKWSSAGFLKSFKGNFN-KYDDDNKKWGGG

XP_008464759.1 PREDICTED: uncharacterized protein LOC103502565 [Cucumis melo]

3.03e-51

100

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Query:  MHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG
        MHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG
Subjt:  MHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG

XP_038875632.1 60S ribosomal protein L7a-2-like [Benincasa hispida]

1.35e-13

87.8

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Query:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        KQRLK+PP+ NQFTKT DKNLATNLFKMLLKYR EDKSQKR
Subjt:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

TrEMBL top hits

e value

%identity

Alignment

A0A059CYF1 60S ribosomal protein L7a

9.3e-13

55.95

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Query:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKS----------QKRYKWSSAGFLKSFKGNFN-KYDDDNKKWGGGNHG
        +QRLK+PP+ NQFTKT DKNLATNLFKMLLKYR EDK           +   K   +  L++ K NFN KYD+  KKWGGG  G
Subjt:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKS----------QKRYKWSSAGFLKSFKGNFN-KYDDDNKKWGGGNHG

A0A1S3CM74 60S ribosomal protein L7a

2.2e-38

100

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Query:  MHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG
        MHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG
Subjt:  MHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG

A0A5A7VJ69 60S ribosomal protein L7a

2.2e-38

100

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Query:  MHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG
        MHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG
Subjt:  MHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG

A0A5D3DB00 60S ribosomal protein L7a

3.3e-10

85.37

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Query:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        KQRLK+PP+ NQFTKT DKNLATNLFKMLLKYR EDK+QKR
Subjt:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

A0A6J1HZX8 60S ribosomal protein L7a

3.3e-10

85.37

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Query:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        KQRLK+PP+ NQFTKT DKNLATNLFKMLLKYR EDK+QKR
Subjt:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

SwissProt top hits

e value

%identity

Alignment

P0DKK7 60S ribosomal protein L7a-2

2.2e-11

78.05

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Query:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        KQRLK+PP+ NQFT+T DKNLATNLFKMLLKYR EDK+ K+
Subjt:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

P35685 60S ribosomal protein L7a-1

2.2e-11

78.05

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Query:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        KQRLK+PP+ NQFT+T DKNLATNLFKMLLKYR EDK+ K+
Subjt:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

P49692 60S ribosomal protein L7a-1

1.1e-10

75.61

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Query:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        KQRLK+PP+ NQFTKT DKNLAT+LFK+LLKYR EDK+ K+
Subjt:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

Q54ZD1 60S ribosomal protein L7a

1.3e-06

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Query:  QRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        +RLK+PP+ NQFT+ FDKN A +LFK+L KYR E+ S K+
Subjt:  QRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

Q9LZH9 60S ribosomal protein L7a-2

1.1e-10

75.61

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Query:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        KQRLK+PP+ NQFTKT DKNLAT+LFK+LLKYR EDK+ K+
Subjt:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

Arabidopsis top hits

e value

%identity

Alignment

AT2G47610.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

7.8e-12

75.61

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Query:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        KQRLK+PP+ NQFTKT DKNLAT+LFK+LLKYR EDK+ K+
Subjt:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

7.8e-12

75.61

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Query:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR
        KQRLK+PP+ NQFTKT DKNLAT+LFK+LLKYR EDK+ K+
Subjt:  KQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKR

Sequences

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CDS sequence

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ATGCATAAACAGAGGTTGAAGATTCCACCATCTTCGAATCAGTTCACTAAGACCTTCGACAAAAATCTTGCGACTAACCTGTTCAAGATGCTTTTGAAATATAGGGCAGA
GGACAAATCACAGAAAAGGTATAAGTGGAGTTCAGCAGGATTCTTGAAGTCATTTAAGGGCAATTTCAACAAGTACGACGACGACAATAAGAAGTGGGGAGGTGGAAATC
ATGGGCTCCAAGTCTTAGGCTAA

mRNA sequence

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Protein sequence

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MHKQRLKIPPSSNQFTKTFDKNLATNLFKMLLKYRAEDKSQKRYKWSSAGFLKSFKGNFNKYDDDNKKWGGGNHGLQVLG

IVF0008573 (gene) of Melon (IVF77) v1 genome