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IVF0008596 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008596
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr01:13470905..13471195
RNA-Seq ExpressionIVF0008596
SyntenyIVF0008596
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047014.1 hypothetical protein E6C27_scaffold230G002160 [Cucumis melo var. makuwa]1.08e-2665.85Show/hide
Query:  RRPRKGQQVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKG
        R+ R+G+QVA ++  TR ANRAQA  K+S+NPH    Q  EESMFDRFAQRL DHFMP PST+ KRFGI RLKALG  TF+G
Subjt:  RRPRKGQQVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKG

KAA0053236.1 uncharacterized protein E6C27_scaffold102G00210 [Cucumis melo var. makuwa]5.45e-2559.3Show/hide
Query:  MAPQRRPRKGQQVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKG
        MAPQ R R+G QV T +  TR+ +R Q  D+MS N H +  Q   ESMFDRF ++L DHFMPTPSTM KRFGI RLKAL   TF+G
Subjt:  MAPQRRPRKGQQVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKG

KAA0054080.1 hypothetical protein E6C27_scaffold1371G00020 [Cucumis melo var. makuwa]2.92e-2057.14Show/hide
Query:  QVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKGPL
        QVA N+ +  SANRAQ  D+MS+NPH   VQ  EESMF+RFAQR+ADH +P  S + KR  I R+KALG T F+G +
Subjt:  QVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKGPL

TYJ97632.1 gag/pol protein [Cucumis melo var. makuwa]5.96e-2358.14Show/hide
Query:  MAPQRRPRKGQQVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKG
        MAPQ R R+G QV T +  TR+ +R Q  D+MS N H +  Q   ESMFDRF ++L DHFMPTP+TM KRFGI RLKAL   TF+G
Subjt:  MAPQRRPRKGQQVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKG

TYK27664.1 uncharacterized protein E5676_scaffold93G00280 [Cucumis melo var. makuwa]1.45e-2057.14Show/hide
Query:  QVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKGPL
        QVA N+ +  SANRAQ  D+MS+NPH   VQ  EESMF+RFA+R+ADH +P  S + KR  I R+KALG TTF+G +
Subjt:  QVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKGPL

TrEMBL top hitse value%identityAlignment
A0A5A7TVM1 Uncharacterized protein2.1e-1965.85Show/hide
Query:  RRPRKGQQVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKG
        R+ R+G+QVA ++  TR ANRAQA  K+S+NPH    Q  EESMFDRFAQRL DHFMP PST+ KRFGI RLKALG  TF+G
Subjt:  RRPRKGQQVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKG

A0A5A7UFQ1 Uncharacterized protein2.0e-1457.14Show/hide
Query:  QVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKGPL
        QVA N+ +  SANRAQ  D+MS+NPH   VQ  EESMF+RFAQR+ADH +P  S + KR  I R+KALG T F+G +
Subjt:  QVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKGPL

A0A5A7UG91 Uncharacterized protein6.8e-1859.3Show/hide
Query:  MAPQRRPRKGQQVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKG
        MAPQ R R+G QV T +  TR+ +R Q  D+MS N H +  Q   ESMFDRF ++L DHFMPTPSTM KRFGI RLKAL   TF+G
Subjt:  MAPQRRPRKGQQVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKG

A0A5D3BCS9 Gag/pol protein1.5e-1758.14Show/hide
Query:  MAPQRRPRKGQQVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKG
        MAPQ R R+G QV T +  TR+ +R Q  D+MS N H +  Q   ESMFDRF ++L DHFMPTP+TM KRFGI RLKAL   TF+G
Subjt:  MAPQRRPRKGQQVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKG

A0A5D3DVY7 Uncharacterized protein1.2e-1457.14Show/hide
Query:  QVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKGPL
        QVA N+ +  SANRAQ  D+MS+NPH   VQ  EESMF+RFA+R+ADH +P  S + KR  I R+KALG TTF+G +
Subjt:  QVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKGPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCACAAAGAAGGCCGAGAAAAGGTCAACAAGTTGCAACTAATATTCTAGCTACTAGGAGCGCTAATAGGGCGCAAGCATATGACAAAATGTCTACTAATCCACA
TAAAATCGATGTACAAATGGCGGAGGAAAGCATGTTCGACCGCTTTGCTCAAAGACTAGCTGATCATTTCATGCCTACACCATCCACTATGGTTAAGAGATTTGGCATCG
GGAGATTGAAGGCATTGGGAGAAACGACTTTCAAGGGACCACTAATCAAAATCATGCGGAGAAGTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCACAAAGAAGGCCGAGAAAAGGTCAACAAGTTGCAACTAATATTCTAGCTACTAGGAGCGCTAATAGGGCGCAAGCATATGACAAAATGTCTACTAATCCACA
TAAAATCGATGTACAAATGGCGGAGGAAAGCATGTTCGACCGCTTTGCTCAAAGACTAGCTGATCATTTCATGCCTACACCATCCACTATGGTTAAGAGATTTGGCATCG
GGAGATTGAAGGCATTGGGAGAAACGACTTTCAAGGGACCACTAATCAAAATCATGCGGAGAAGTGGTTGA
Protein sequenceShow/hide protein sequence
MAPQRRPRKGQQVATNILATRSANRAQAYDKMSTNPHKIDVQMAEESMFDRFAQRLADHFMPTPSTMVKRFGIGRLKALGETTFKGPLIKIMRRSG