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IVF0008606 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008606
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag protease polyprotein
Genome locationchr12:5019521..5019805
RNA-Seq ExpressionIVF0008606
SyntenyIVF0008606
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047505.1 hypothetical protein E6C27_scaffold498G001320 [Cucumis melo var. makuwa]4.25e-0460Show/hide
Query:  DNHLHLKCGR------HLHLQCNTVEMIIIFIFNTAQQRRSSSSS
        D+HL L+C R      HL LQ +T E II+FIFN AQQ+RSSSSS
Subjt:  DNHLHLKCGR------HLHLQCNTVEMIIIFIFNTAQQRRSSSSS
KAA0051895.1 gag protease polyprotein [Cucumis melo var. makuwa]4.07e-55100Show/hide
Query:  MDHHIYLQYGHNKNDNHLHLKCGRHLHLQCNTVEMIIIFIFNTAQQRRSSSSSQCDVVQVITIFNATQTIIIFNAAQTIILFNATHTMIIFNAA
        MDHHIYLQYGHNKNDNHLHLKCGRHLHLQCNTVEMIIIFIFNTAQQRRSSSSSQCDVVQVITIFNATQTIIIFNAAQTIILFNATHTMIIFNAA
Subjt:  MDHHIYLQYGHNKNDNHLHLKCGRHLHLQCNTVEMIIIFIFNTAQQRRSSSSSQCDVVQVITIFNATQTIIIFNAAQTIILFNATHTMIIFNAA
KAA0051997.1 hypothetical protein E6C27_scaffold60G004810 [Cucumis melo var. makuwa]7.09e-1752.63Show/hide
Query:  KNDNHLHLKCGRHLHLQCNTVEMIIIFIFNTAQQRRSSSSS-----------QCDVV-----------QVITIFNATQTIIIFNAAQTIILFNAT
        +NDNHLHLKCG H +LQC+TVEMIIIFIFN  +QRR SSSS           QC +            Q + +FN   T+IIFNAAQ+I +FNAT
Subjt:  KNDNHLHLKCGRHLHLQCNTVEMIIIFIFNTAQQRRSSSSS-----------QCDVV-----------QVITIFNATQTIIIFNAAQTIILFNAT
KAA0059585.1 uncharacterized protein E6C27_scaffold54G00040 [Cucumis melo var. makuwa]7.87e-1183.78Show/hide
Query:  KNDNHLHLKCGRHLHLQCNTVEMIIIFIFNTAQQRRS
        ++D+HLHLK GRHLHLQCNTVEMIIIFIFNT QQR+S
Subjt:  KNDNHLHLKCGRHLHLQCNTVEMIIIFIFNTAQQRRS
TrEMBL top hitse value%identityAlignment
A0A5A7UC34 Uncharacterized protein3.4e-1451.55Show/hide
Query:  KNDNHLHLKCGRHLHLQCNTVEMIIIFIFNTAQQRRSSSSS-----------QCDV-----------VQVITIFNATQTIIIFNAAQTIILFNATHT
        +NDNHLHLKCG H +LQC+TVEMIIIFIFN  +QRR SSSS           QC +            Q + +FN   T+IIFNAAQ+I +FNAT +
Subjt:  KNDNHLHLKCGRHLHLQCNTVEMIIIFIFNTAQQRRSSSSS-----------QCDV-----------VQVITIFNATQTIIIFNAAQTIILFNATHT
A0A5A7UDW0 Gag protease polyprotein9.2e-44100Show/hide
Query:  MDHHIYLQYGHNKNDNHLHLKCGRHLHLQCNTVEMIIIFIFNTAQQRRSSSSSQCDVVQVITIFNATQTIIIFNAAQTIILFNATHTMIIFNAA
        MDHHIYLQYGHNKNDNHLHLKCGRHLHLQCNTVEMIIIFIFNTAQQRRSSSSSQCDVVQVITIFNATQTIIIFNAAQTIILFNATHTMIIFNAA
Subjt:  MDHHIYLQYGHNKNDNHLHLKCGRHLHLQCNTVEMIIIFIFNTAQQRRSSSSSQCDVVQVITIFNATQTIIIFNAAQTIILFNATHTMIIFNAA
A0A5A7V172 Uncharacterized protein1.3e-0881.58Show/hide
Query:  NKNDNHLHLKCGRHLHLQCNTVEMIIIFIFNTAQQRRS
        +++D+HLHLK GRHLHLQCNTVEMIIIFIFNT QQR+S
Subjt:  NKNDNHLHLKCGRHLHLQCNTVEMIIIFIFNTAQQRRS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCATCATATCTATCTTCAATACGGGCACAACAAAAACGATAATCATCTTCATCTTAAATGTGGTCGTCATCTTCATCTTCAATGCAACACAGTAGAGATGATCAT
CATCTTCATCTTCAATACCGCGCAACAGAGACGGTCGTCATCTTCATCTCAATGCGACGTAGTCCAGGTGATCACCATCTTCAATGCGACGCAGACGATCATCATCTTCA
ATGCGGCGCAGACGATCATCCTCTTCAATGCAACACACACGATGATCATCTTCAATGCGGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCATCATATCTATCTTCAATACGGGCACAACAAAAACGATAATCATCTTCATCTTAAATGTGGTCGTCATCTTCATCTTCAATGCAACACAGTAGAGATGATCAT
CATCTTCATCTTCAATACCGCGCAACAGAGACGGTCGTCATCTTCATCTCAATGCGACGTAGTCCAGGTGATCACCATCTTCAATGCGACGCAGACGATCATCATCTTCA
ATGCGGCGCAGACGATCATCCTCTTCAATGCAACACACACGATGATCATCTTCAATGCGGCATAG
Protein sequenceShow/hide protein sequence
MDHHIYLQYGHNKNDNHLHLKCGRHLHLQCNTVEMIIIFIFNTAQQRRSSSSSQCDVVQVITIFNATQTIIIFNAAQTIILFNATHTMIIFNAA