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IVF0008609 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008609
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description40S ribosomal protein S13
Genome locationchr01:7924224..7924379
RNA-Seq ExpressionIVF0008609
SyntenyIVF0008609
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000589 - Ribosomal protein S15
IPR009068 - S15/NS1, RNA-binding
IPR023029 - Ribosomal protein S15P


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046917.1 40S ribosomal protein S13-like [Cucumis melo var. makuwa]1.14e-2089.36Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++ GL PEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
KAA0049888.1 40S ribosomal protein S13-like [Cucumis melo var. makuwa]1.14e-2089.36Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++ GL PEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
KAA0051875.1 40S ribosomal protein S13-like [Cucumis melo var. makuwa]8.03e-2189.36Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++ GLTPEIPEDLYHLIKK VSIRKHLERNRKDKDSKFRLILVDS
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
KAA0059571.1 40S ribosomal protein S13-like [Cucumis melo var. makuwa]1.97e-2191.49Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++ GLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
TYK07625.1 40S ribosomal protein S13-like [Cucumis melo var. makuwa]1.14e-2089.36Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++ GL PEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
TrEMBL top hitse value%identityAlignment
A0A0N4V0I2 40S ribosomal protein S131.4e-1487.23Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L+SKG+ PEIPEDLYHLIKKAVSIRKHLERNRKDKDSK+RLILV+S
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
A0A151TJI5 40S ribosomal protein S131.1e-1489.36Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++ GLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILV+S
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
A0A5A7UDU2 40S ribosomal protein S13-like1.1e-1489.36Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++ GLTPEIPEDLYHLIKK VSIRKHLERNRKDKDSKFRLILVDS
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
A0A5A7V1J4 40S ribosomal protein S13-like3.7e-1591.49Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++ GLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
A8UAD8 40S ribosomal protein S138.3e-1589.36Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++KGL PEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILV+S
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
SwissProt top hitse value%identityAlignment
P59223 40S ribosomal protein S13-12.5e-1685.11Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++ GL PEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILV+S
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
P59224 40S ribosomal protein S13-22.5e-1685.11Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++ GL PEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILV+S
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
P62299 40S ribosomal protein S131.9e-1682.98Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++KG+ PEIPEDLYHLIKKAV+IRKHLERNRKDKDSK+RLILV+S
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
P62300 40S ribosomal protein S131.9e-1682.98Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++KG+ PEIPEDLYHLIKKAV+IRKHLERNRKDKDSK+RLILV+S
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
P62302 40S ribosomal protein S131.1e-1687.23Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++ GL PEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILV+S
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
Arabidopsis top hitse value%identityAlignment
AT3G60770.1 Ribosomal protein S13/S151.8e-1785.11Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++ GL PEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILV+S
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
AT4G00100.1 ribosomal protein S13A1.8e-1785.11Show/hide
Query:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS
        +L++ GL PEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILV+S
Subjt:  LLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGCTTTTTTATTACGATCAAAAGGGCTTACTCCGGAGATTCCTGAGGATCTTTACCATTTGATTAAGAAGGCTGTCTCGATTAGAAAGCATTTGGAAAGGAATAG
GAAGGACAAAGACTCCAAGTTCAGGTTGATTCTTGTTGATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGCTTTTTTATTACGATCAAAAGGGCTTACTCCGGAGATTCCTGAGGATCTTTACCATTTGATTAAGAAGGCTGTCTCGATTAGAAAGCATTTGGAAAGGAATAG
GAAGGACAAAGACTCCAAGTTCAGGTTGATTCTTGTTGATTCTTGA
Protein sequenceShow/hide protein sequence
MCAFLLRSKGLTPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVDS