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IVF0008649 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008649
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionATP-dependent RNA helicase DBP3-like
Genome locationchr04:27317112..27321968
RNA-Seq ExpressionIVF0008649
SyntenyIVF0008649
Gene Ontology termsGO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016899655.1 PREDICTED: ATP-dependent RNA helicase DBP3-like [Cucumis melo]9.33e-2390.54Show/hide
Query:  MAGIMKKIQETVQSHKKQHDGENGAEGVGIVEKMKEKIHGYKEKNKEKKK---ERKEKKEKEKEEKKAKQKAEE
        MAGIMKKI+ETVQSHKKQHDGENGAEG GIVEKMKEKIHGYKEKNKEKKK   ERKEKKEKEKE KKAK KAEE
Subjt:  MAGIMKKIQETVQSHKKQHDGENGAEGVGIVEKMKEKIHGYKEKNKEKKK---ERKEKKEKEKEEKKAKQKAEE
XP_031737596.1 dehydrin HIRD11-like [Cucumis sativus]7.64e-2684.21Show/hide
Query:  MAGIMKKIQETVQSHKKQHDGENGA-EGVGIVEKMKEKIHGYKEKNKEKKK---ERKEKKEKEKEEKKAKQKAEEEEEEEEEEEEEEDDRESSDG
        MAGIMKKIQETVQSHKKQHDGENGA EGVGIVEKMKEKIHGYKEKNKEKKK   ERKEKKEKEK+EKKAKQKA       EE EEEED  ESSDG
Subjt:  MAGIMKKIQETVQSHKKQHDGENGA-EGVGIVEKMKEKIHGYKEKNKEKKK---ERKEKKEKEKEEKKAKQKAEEEEEEEEEEEEEEDDRESSDG
TrEMBL top hitse value%identityAlignment
A0A0A0LCI3 Uncharacterized protein8.7e-1882.11Show/hide
Query:  MAGIMKKIQETVQSHKKQHDGENGA-EGVGIVEKMKEKIHGYKEKNKEKK---KERKEKKEKEKEEKKAKQKAEEEEEEEEEEEEEEDDRESSDG
        MAGIMKKIQETVQSHKKQHDGENGA EGVGIVEKMKEKIHGYKEKNKEKK   KERKEKKEKEK+EKKAKQKAEE EEEE+  E  + D + S G
Subjt:  MAGIMKKIQETVQSHKKQHDGENGA-EGVGIVEKMKEKIHGYKEKNKEKK---KERKEKKEKEKEEKKAKQKAEEEEEEEEEEEEEEDDRESSDG
A0A1S4DVB9 ATP-dependent RNA helicase DBP3-like2.6e-1475.29Show/hide
Query:  MAGIMKKIQETVQSHKKQHDGENGAEGVGIVEKMKEKIHGYKEKNKEKKKERKEKKEKEKEEKKAKQKAEEEEEEEEEEEEEEDD
        MAGIMKKI+ETVQSHKKQHDGENGAEG GIVEKMKEKIHGYKEKNKEKKK+RKE+KEK+++EK+ K KA+ EE+  E  + + DD
Subjt:  MAGIMKKIQETVQSHKKQHDGENGAEGVGIVEKMKEKIHGYKEKNKEKKKERKEKKEKEKEEKKAKQKAEEEEEEEEEEEEEEDD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGAATAATGAAGAAGATCCAAGAAACAGTGCAGAGCCATAAGAAGCAACACGATGGGGAGAATGGAGCTGAAGGAGTTGGGATTGTGGAGAAGATGAAGGAGAA
GATCCATGGTTACAAAGAGAAAAACAAAGAGAAGAAGAAGGAGAGGAAGGAGAAAAAAGAAAAAGAGAAGGAGGAGAAAAAAGCCAAACAAAAAGCAGAAGAAGAAGAAG
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGACAGGGAAAGCAGCGATGGCCATAGAAGGAGAGGAAGGAGAAAAAAGAAAAAGAGAAGGAGAAAAAAGCCAAAGCAA
AAGCAGAAGAAGATGGTGGCGAAAGCAGCGATGGCGATAGCGACGACAGTGGCGGTGGGAGCGACTAATAAAACTGTGTGTCTTAGCGTTTCGTCCTTTCTTGTTCTCTT
TTTCGATTCCTTTTTTCATTCTATTAGAAAAATATTGCATGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGAATAATGAAGAAGATCCAAGAAACAGTGCAGAGCCATAAGAAGCAACACGATGGGGAGAATGGAGCTGAAGGAGTTGGGATTGTGGAGAAGATGAAGGAGAA
GATCCATGGTTACAAAGAGAAAAACAAAGAGAAGAAGAAGGAGAGGAAGGAGAAAAAAGAAAAAGAGAAGGAGGAGAAAAAAGCCAAACAAAAAGCAGAAGAAGAAGAAG
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGACAGGGAAAGCAGCGATGGCCATAGAAGGAGAGGAAGGAGAAAAAAGAAAAAGAGAAGGAGAAAAAAGCCAAAGCAA
AAGCAGAAGAAGATGGTGGCGAAAGCAGCGATGGCGATAGCGACGACAGTGGCGGTGGGAGCGACTAATAAAACTGTGTGTCTTAGCGTTTCGTCCTTTCTTGTTCTCTT
TTTCGATTCCTTTTTTCATTCTATTAGAAAAATATTGCATGATTAG
Protein sequenceShow/hide protein sequence
MAGIMKKIQETVQSHKKQHDGENGAEGVGIVEKMKEKIHGYKEKNKEKKKERKEKKEKEKEEKKAKQKAEEEEEEEEEEEEEEDDRESSDGHRRRGRRKKKKRRRKKPKQ
KQKKMVAKAAMAIATTVAVGATNKTVCLSVSSFLVLFFDSFFHSIRKILHD