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IVF0008650 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008650
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNon-LTR retroelement reverse transcriptase-like protein
Genome locationchr08:24529917..24530192
RNA-Seq ExpressionIVF0008650
SyntenyIVF0008650
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035524.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.54e-2065.33Show/hide
Query:  MANASSEWRRLVQCLKQLEIHLQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNL
        M +AS+EWR LV+C K LE+HLQ+RKRAE + F  LSQEN+SENA + VFSSW KK S + FF L RIGHKSF+L
Subjt:  MANASSEWRRLVQCLKQLEIHLQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNL

KAA0040927.1 hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa]5.19e-2557.84Show/hide
Query:  MANASSEWRRLVQCLKQLEIHLQERKRAEPKHF---------------RCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNLRGSYSEDLNP
        + NAS EWR LV+C K L++HLQ+RK AE + F               RC S EN+SENA DSVFSS  +K+  DDFF LLRIGH+SF+LRGSYSED NP
Subjt:  MANASSEWRRLVQCLKQLEIHLQERKRAEPKHF---------------RCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNLRGSYSEDLNP

Query:  HS
        HS
Subjt:  HS

KAA0057641.1 hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]3.57e-3167.78Show/hide
Query:  MANASSEWRRLVQCLKQLEIHLQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNLRGSYSEDLNPHSWHA
        MANAS+EW+ LV+C K LE++LQ RK+ E K F C SQEN+S+NA DS FSSW KKRS   FFHLLRIGHKSF+L+GSY ED N HSWH+
Subjt:  MANASSEWRRLVQCLKQLEIHLQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNLRGSYSEDLNPHSWHA

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.02e-2373.91Show/hide
Query:  LQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNLRGSYSEDLNPHSWHA
        ++ R RA+ K FRC SQEN+SEN SDSVFSSW KK + D FF LLRIGHKSF+LRGSYSED NPHSWHA
Subjt:  LQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNLRGSYSEDLNPHSWHA

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]2.43e-2373.61Show/hide
Query:  MANASSEWRRLVQCLKQLEIHLQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKS
        MANAS+EWR LV+C K LE+HLQ RKR E + FRC SQEN SENA DS FSSW KKRS D FF LLRIGHKS
Subjt:  MANASSEWRRLVQCLKQLEIHLQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKS

TrEMBL top hitse value%identityAlignment
A0A5A7UVV0 Uncharacterized protein1.1e-2567.78Show/hide
Query:  MANASSEWRRLVQCLKQLEIHLQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNLRGSYSEDLNPHSWHA
        MANAS+EW+ LV+C K LE++LQ RK+ E K F C SQEN+S+NA DS FSSW KKRS   FFHLLRIGHKSF+L+GSY ED N HSWH+
Subjt:  MANASSEWRRLVQCLKQLEIHLQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNLRGSYSEDLNPHSWHA

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein2.6e-1973.91Show/hide
Query:  LQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNLRGSYSEDLNPHSWHA
        ++ R RA+ K FRC SQEN+SEN SDSVFSSW KK + D FF LLRIGHKSF+LRGSYSED NPHSWHA
Subjt:  LQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNLRGSYSEDLNPHSWHA

A0A5D3CGX3 Uncharacterized protein6.9e-2057.84Show/hide
Query:  MANASSEWRRLVQCLKQLEIHL---------------QERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNLRGSYSEDLNP
        + NAS EWR LV+C K L++HL               Q+RKR E   FRC S EN+SENA DSVFSS  +K+  DDFF LLRIGH+SF+LRGSYSED NP
Subjt:  MANASSEWRRLVQCLKQLEIHL---------------QERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNLRGSYSEDLNP

Query:  HS
        HS
Subjt:  HS

A0A5D3DFP2 Uncharacterized protein4.4e-1973.61Show/hide
Query:  MANASSEWRRLVQCLKQLEIHLQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKS
        MANAS+EWR LV+C K LE+HLQ RKR E + FRC SQEN SENA DS FSSW KKRS D FF LLRIGHKS
Subjt:  MANASSEWRRLVQCLKQLEIHLQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKS

A0A5D3E5W4 NBS-LRR type resistance protein3.5e-1665.33Show/hide
Query:  MANASSEWRRLVQCLKQLEIHLQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNL
        M +AS+EWR LV+C K LE+HLQ+RKRAE + F  LSQEN+SENA + VFSSW KK S + FF L RIGHKSF+L
Subjt:  MANASSEWRRLVQCLKQLEIHLQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATGCTTCCAGTGAGTGGCGAAGGCTCGTCCAGTGTCTGAAACAACTGGAAATACACTTGCAAGAAAGGAAACGGGCTGAGCCCAAGCACTTTCGGTGCTTGTC
CCAAGAAAACTCGAGCGAGAATGCCTCGGACTCAGTTTTCTCGTCTTGGGATAAAAAACGGTCCCGCGACGATTTCTTCCATTTGCTTCGTATTGGCCATAAGTCTTTCA
ATCTTCGGGGATCGTACTCCGAGGACCTCAACCCACACTCCTGGCATGCTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATGCTTCCAGTGAGTGGCGAAGGCTCGTCCAGTGTCTGAAACAACTGGAAATACACTTGCAAGAAAGGAAACGGGCTGAGCCCAAGCACTTTCGGTGCTTGTC
CCAAGAAAACTCGAGCGAGAATGCCTCGGACTCAGTTTTCTCGTCTTGGGATAAAAAACGGTCCCGCGACGATTTCTTCCATTTGCTTCGTATTGGCCATAAGTCTTTCA
ATCTTCGGGGATCGTACTCCGAGGACCTCAACCCACACTCCTGGCATGCTCGTTGA
Protein sequenceShow/hide protein sequence
MANASSEWRRLVQCLKQLEIHLQERKRAEPKHFRCLSQENSSENASDSVFSSWDKKRSRDDFFHLLRIGHKSFNLRGSYSEDLNPHSWHAR