CuGenDBv2

Gene ID	IVF0008656
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Reverse transcriptase
Genome location	chr04:25490126..25497706
RNA-Seq Expression	IVF0008656
Synteny	IVF0008656
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0004519 - endonuclease activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR005162 - Retrotransposon gag domain IPR021109 - Aspartic peptidase domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0

94.67

Show/hide

Query:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
        TRVD     LETT+NIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMIN MSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
Subjt:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV

Query:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK
        KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTL TMHLSEDAKLWWRS+FVD+QEGRC IDTWDALKRELRSQFFPENVEILARRKLRELK
Subjt:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK

Query:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN
        HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRF+
Subjt:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN

Query:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV
        GDRRSHQSNTGNSWRG SNQN+S+R LSCFICKGPHMARECPNKTAFNAFQASL SDSDNQQ+QTE E +QTEEVDNPRM ALKFLSSLQKKVGETNT V
Subjt:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV

Query:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ
        ERGLMYVD WIN+KPTKSTMVDSGATHNFITE EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLG WSGLVDFVVVKMDDFDVVLGM+FLLEHQ
Subjt:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ

Query:  VIPMPLAKCLVITGPTPSVVQTDLR
        VIPMPLAKCLVITGPTPSVVQTDLR
Subjt:  VIPMPLAKCLVITGPTPSVVQTDLR

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0

94.67

Show/hide

Query:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
        TRVD     LETT+NIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMIN MSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
Subjt:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV

Query:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK
        KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTL TMHLSEDAKLWWRS+FVD+QEGRC IDTWDALKRELRSQFFPENVEILARRKLRELK
Subjt:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK

Query:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN
        HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRF+
Subjt:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN

Query:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV
        GDRRSHQSNTGNSWRG SNQN+S+R LSCFICKGPHMARECPNKTAFNAFQASL SDSDNQQ+QTE E +QTEEVDNPRM ALKFLSSLQKKVGETNT V
Subjt:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV

Query:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ
        ERGLMYVD WIN+KPTKSTMVDSGATHNFITE EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLG WSGLVDFVVVKMDDFDVVLGM+FLLEHQ
Subjt:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ

Query:  VIPMPLAKCLVITGPTPSVVQTDLR
        VIPMPLAKCLVITGPTPSVVQTDLR
Subjt:  VIPMPLAKCLVITGPTPSVVQTDLR

TYK02231.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0

94.67

Show/hide

Query:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
        TRVD     LETT+NIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMIN MSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
Subjt:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV

Query:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK
        KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTL TMHLSEDAKLWWRS+FVD+QEGRC IDTWDALKRELRSQFFPENVEILARRKLRELK
Subjt:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK

Query:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN
        HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRF+
Subjt:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN

Query:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV
        GDRRSHQSNTGNSWRG SNQN+S+R LSCFICKGPHMARECPNKTAFNAFQASL SDSDNQQ+QTE E +QTEEVDNPRM ALKFLSSLQKKVGETNT V
Subjt:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV

Query:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ
        ERGLMYVD WIN+KPTKSTMVDSGATHNFITE EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLG WSGLVDFVVVKMDDFDVVLGM+FLLEHQ
Subjt:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ

Query:  VIPMPLAKCLVITGPTPSVVQTDLR
        VIPMPLAKCLVITGPTPSVVQTDLR
Subjt:  VIPMPLAKCLVITGPTPSVVQTDLR

TYK25585.1 uncharacterized protein E5676_scaffold352G007440 [Cucumis melo var. makuwa]

0.0

95.43

Show/hide

Query:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
        TRVD     LETT+NIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMIN MSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
Subjt:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV

Query:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK
        KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTL TMHLSEDAKLWWRS+FVD+QEGRC IDTWDALKRELRSQFFPENVEILARRKLRELK
Subjt:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK

Query:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN
        HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN
Subjt:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN

Query:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV
        GDRRSHQSNTGNSWRG SNQN+S+R LSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQ+QTERE DQTEEVDNPRM ALKFLSSLQKKVGETNT V
Subjt:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV

Query:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ
        ERGLMYVD WIN+KPTKSTMVDSGATHNFITE EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLG WSGLVDFVVVKMDDFDVVLGM+FLLEHQ
Subjt:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ

Query:  VIPMPLAKCLVITGPTPSVVQTDLR
        VIPMPLAKCLVITGPTPSVVQTDLR
Subjt:  VIPMPLAKCLVITGPTPSVVQTDLR

TYK28713.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0

94.86

Show/hide

Query:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
        TRVD     LETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMIN MSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
Subjt:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV

Query:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK
        KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTL TMHLSEDAKLWWRS+FVD+QEGRC IDTWDALKRELRSQFFPENVEILARRKLRELK
Subjt:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK

Query:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN
        HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRF+
Subjt:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN

Query:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV
        GDRRSHQSNTGNSWRG SNQN+S+R LSCFICKGPHMARECPNKTAFNAFQASL SDSDNQQ+QTE E +QTEEVDNPRM ALKFLSSLQKKVGETNT V
Subjt:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV

Query:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ
        ERGLMYVD WIN+KPTKSTMVDSGATHNFITE EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLG WSGLVDFVVVKMDDFDVVLGM+FLLEHQ
Subjt:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ

Query:  VIPMPLAKCLVITGPTPSVVQTDLR
        VIPMPLAKCLVITGPTPSVVQTDLR
Subjt:  VIPMPLAKCLVITGPTPSVVQTDLR

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T0E2 Reverse transcriptase

9.3e-278

94.67

Show/hide

Query:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
        TRVD     LETT+NIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMIN MSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
Subjt:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV

Query:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK
        KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTL TMHLSEDAKLWWRS+FVD+QEGRC IDTWDALKRELRSQFFPENVEILARRKLRELK
Subjt:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK

Query:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN
        HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRF+
Subjt:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN

Query:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV
        GDRRSHQSNTGNSWRG SNQN+S+R LSCFICKGPHMARECPNKTAFNAFQASL SDSDNQQ+QTE E +QTEEVDNPRM ALKFLSSLQKKVGETNT V
Subjt:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV

Query:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ
        ERGLMYVD WIN+KPTKSTMVDSGATHNFITE EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLG WSGLVDFVVVKMDDFDVVLGM+FLLEHQ
Subjt:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ

Query:  VIPMPLAKCLVITGPTPSVVQTDLR
        VIPMPLAKCLVITGPTPSVVQTDLR
Subjt:  VIPMPLAKCLVITGPTPSVVQTDLR

A0A5D3BRZ6 Reverse transcriptase

9.3e-278

94.67

Show/hide

Query:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
        TRVD     LETT+NIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMIN MSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
Subjt:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV

Query:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK
        KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTL TMHLSEDAKLWWRS+FVD+QEGRC IDTWDALKRELRSQFFPENVEILARRKLRELK
Subjt:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK

Query:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN
        HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRF+
Subjt:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN

Query:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV
        GDRRSHQSNTGNSWRG SNQN+S+R LSCFICKGPHMARECPNKTAFNAFQASL SDSDNQQ+QTE E +QTEEVDNPRM ALKFLSSLQKKVGETNT V
Subjt:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV

Query:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ
        ERGLMYVD WIN+KPTKSTMVDSGATHNFITE EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLG WSGLVDFVVVKMDDFDVVLGM+FLLEHQ
Subjt:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ

Query:  VIPMPLAKCLVITGPTPSVVQTDLR
        VIPMPLAKCLVITGPTPSVVQTDLR
Subjt:  VIPMPLAKCLVITGPTPSVVQTDLR

A0A5D3C4R1 Reverse transcriptase

9.3e-278

94.67

Show/hide

Query:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
        TRVD     LETT+NIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMIN MSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
Subjt:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV

Query:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK
        KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTL TMHLSEDAKLWWRS+FVD+QEGRC IDTWDALKRELRSQFFPENVEILARRKLRELK
Subjt:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK

Query:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN
        HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRF+
Subjt:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN

Query:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV
        GDRRSHQSNTGNSWRG SNQN+S+R LSCFICKGPHMARECPNKTAFNAFQASL SDSDNQQ+QTE E +QTEEVDNPRM ALKFLSSLQKKVGETNT V
Subjt:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV

Query:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ
        ERGLMYVD WIN+KPTKSTMVDSGATHNFITE EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLG WSGLVDFVVVKMDDFDVVLGM+FLLEHQ
Subjt:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ

Query:  VIPMPLAKCLVITGPTPSVVQTDLR
        VIPMPLAKCLVITGPTPSVVQTDLR
Subjt:  VIPMPLAKCLVITGPTPSVVQTDLR

A0A5D3DQ20 Retrotrans_gag domain-containing protein

3.4e-280

95.43

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Query:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
        TRVD     LETT+NIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMIN MSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
Subjt:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV

Query:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK
        KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTL TMHLSEDAKLWWRS+FVD+QEGRC IDTWDALKRELRSQFFPENVEILARRKLRELK
Subjt:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK

Query:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN
        HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN
Subjt:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN

Query:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV
        GDRRSHQSNTGNSWRG SNQN+S+R LSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQ+QTERE DQTEEVDNPRM ALKFLSSLQKKVGETNT V
Subjt:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV

Query:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ
        ERGLMYVD WIN+KPTKSTMVDSGATHNFITE EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLG WSGLVDFVVVKMDDFDVVLGM+FLLEHQ
Subjt:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ

Query:  VIPMPLAKCLVITGPTPSVVQTDLR
        VIPMPLAKCLVITGPTPSVVQTDLR
Subjt:  VIPMPLAKCLVITGPTPSVVQTDLR

A0A5D3DY93 Reverse transcriptase

7.1e-278

94.86

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Query:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
        TRVD     LETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMIN MSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV
Subjt:  TRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLLEMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRV

Query:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK
        KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTL TMHLSEDAKLWWRS+FVD+QEGRC IDTWDALKRELRSQFFPENVEILARRKLRELK
Subjt:  KIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFVDMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELK

Query:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN
        HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRF+
Subjt:  HTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQDTRRHPSSSSGGSRNNRPSSPKTTGGDRRFN

Query:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV
        GDRRSHQSNTGNSWRG SNQN+S+R LSCFICKGPHMARECPNKTAFNAFQASL SDSDNQQ+QTE E +QTEEVDNPRM ALKFLSSLQKKVGETNT V
Subjt:  GDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRMRALKFLSSLQKKVGETNTLV

Query:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ
        ERGLMYVD WIN+KPTKSTMVDSGATHNFITE EAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLG WSGLVDFVVVKMDDFDVVLGM+FLLEHQ
Subjt:  ERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVVLGMKFLLEHQ

Query:  VIPMPLAKCLVITGPTPSVVQTDLR
        VIPMPLAKCLVITGPTPSVVQTDLR
Subjt:  VIPMPLAKCLVITGPTPSVVQTDLR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGAACAATCTGCGGCAGAGCTCTGTCGGTCGAGGAACAACAAGAAGCGGGAAAACCCCTATCCTTTCTCCGAGGACTTCCTCTAGACGCTTGTGGTCAGTGGAAGCTTC
CCTCGAAGAAATCCGACAACTGTTGAACGACGTTGTACAACGATTAAATGAAGATAATGTGCAGTGGAATGATAGAGAAATAGAACCACCGATGTTACAACATTGGGGAA
GGAGAGGTAGAAGAGATCAGCGGCCATTTCCAAAGGGCAGATGCGATCGAAGGTTCGATTGGCGAGCGCGCGAAGAAGAAATTCAAAACTCTTCTTCTTCAGAAGAAAGC
GACAGCGAAGATGTTGATGAATTCGGACGACACCGATATGCCCGAAATGAAAGACAACAACGAGAAAATTCTGAATATAAAATGAAGATTGACCTCCCGAGCTACGACGG
AAATTCTAAATTAAAGAGCTCAACATCTGAAAAGTCAGTAGAACAAGAAAGGCAAGAAGAGAGCAGTGGAAAGAAAGAAGTTCCAGAAGGAACACAGAAAGACAATAATC
CTTATCAATGTCCCTTCTCAGGTAGAAACGATCTAACAAAGCTTAAGTGCCAAAAGCGAAGAGTTCCCCACACAAGCTCTGATACTGAGGGAGCTCAACGCATTCTAATT
GACCTAACCGGCTGGACTTATCGGCTAGAACGAGGAGGGAGGCTACATCATACCGCGAGTTTGTCCGCGGATTCCGAATTTCGAACGGCTGACTTGTTGATCGAGCTAAA
CAAGTGTCGCACAATCGTGTTGAGAAGTTACGATTGTGACAAGTGCTGGCCGTGTCGAAGGGTTTCTGATACAAGAGTTGATGACAAGGGTCGACGCCTGGAAACAACCA
TAAACATCGGAAGAACTGTCAACTACGAGCGTGGAGACAGTTCGACGGGCTCTGTTGCCCATATTGAGGAGCGTGTTCAAGAGCTGGATAGCTCTCAAAAGACGCTGTTA
GAGATGATAAACGATATGTCAGAGGATTTCCGAGCTACCCTCGATGTCGTCAGAAACGAAATCGCAGATGTGAATGCGAGACTGAGCCTCACAATGCGAGCAATGGCAAA
TCAAGCTCCCGCTGGGGGAGCCATTCCGGTTAGTAGAGTGAAGATCCCGGAACCAAAGCCATTCTGTGGGGCAAGAGACGCGAAGGCCCTAGAAAACTATATCTTTGACC
TGGAGCAGTACTTCAGGGCCACAAACACGGTTACAGAGGAAGCCAAAGTCACGTTGGTGACGATGCATCTATCTGAGGATGCCAAGTTATGGTGGAGGTCCCAATTTGTC
GACATGCAGGAGGGACGTTGCGCGATAGATACTTGGGACGCTTTGAAGAGAGAACTTCGCTCACAATTCTTCCCTGAAAATGTCGAGATCTTAGCTCGACGAAAGTTACG
CGAGCTGAAACACACCGGTAGTATTCGGGAGTATGTGAAACAGTTTGCGGGACTGATGTTGGATATACGTGATATGTCCGAGAAAGACAAAGTTTTCTGTTTTGTCGAAG
GATTGAAGCCGTGGGCTAAGACAAAGCTATATGAACAAAGAGTTCAAGACCTCACGTCCGCGTACGCTGCAGCCGAACGGCTGTTTGACCTGTCTAACGACTCTCAAGAT
ACGAGACGTCATCCAAGTTCCTCATCTGGAGGAAGTAGGAACAACCGCCCAAGTTCTCCTAAAACTACGGGAGGGGATAGACGCTTTAATGGAGATCGTAGATCCCATCA
ATCGAATACTGGAAACTCCTGGCGAGGACAAAGTAACCAGAATGTGTCCAGTCGTTCTCTTAGTTGCTTCATATGTAAGGGACCACACATGGCCAGGGAATGCCCGAACA
AAACTGCTTTCAATGCATTCCAGGCATCTTTGGCCTCAGATTCAGACAATCAACAAAATCAGACTGAGAGGGAAGCAGACCAGACAGAAGAAGTTGATAACCCTCGAATG
AGGGCCTTGAAATTTCTGTCATCTCTCCAGAAAAAGGTGGGGGAGACGAACACACTAGTGGAAAGGGGCTTAATGTATGTTGACATCTGGATCAACGAGAAGCCAACCAA
AAGCACTATGGTTGACTCCGGTGCCACCCACAATTTCATAACAGAAGCAGAAGCTAAACGTTTGAATCTCCGCTGGGAGAAGGATGCAGGAAGAATGAAAGCCGTGAATT
CTGCTGCCCTGCCTATCATCGGACTAGTGAAACGAACGATGATAAGATTAGGAGAATGGAGTGGCCTCGTAGACTTTGTAGTAGTAAAAATGGATGACTTTGATGTGGTA
CTGGGAATGAAGTTCCTACTCGAACATCAGGTAATCCCAATGCCTTTGGCCAAATGCTTGGTGATCACTGGACCTACACCCTCGGTTGTACAGACTGACCTACGTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MNNLRQSSVGRGTTRSGKTPILSPRTSSRRLWSVEASLEEIRQLLNDVVQRLNEDNVQWNDREIEPPMLQHWGRRGRRDQRPFPKGRCDRRFDWRAREEEIQNSSSSEES
DSEDVDEFGRHRYARNERQQRENSEYKMKIDLPSYDGNSKLKSSTSEKSVEQERQEESSGKKEVPEGTQKDNNPYQCPFSGRNDLTKLKCQKRRVPHTSSDTEGAQRILI
DLTGWTYRLERGGRLHHTASLSADSEFRTADLLIELNKCRTIVLRSYDCDKCWPCRRVSDTRVDDKGRRLETTINIGRTVNYERGDSSTGSVAHIEERVQELDSSQKTLL
EMINDMSEDFRATLDVVRNEIADVNARLSLTMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLVTMHLSEDAKLWWRSQFV
DMQEGRCAIDTWDALKRELRSQFFPENVEILARRKLRELKHTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQD
TRRHPSSSSGGSRNNRPSSPKTTGGDRRFNGDRRSHQSNTGNSWRGQSNQNVSSRSLSCFICKGPHMARECPNKTAFNAFQASLASDSDNQQNQTEREADQTEEVDNPRM
RALKFLSSLQKKVGETNTLVERGLMYVDIWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGEWSGLVDFVVVKMDDFDVV
LGMKFLLEHQVIPMPLAKCLVITGPTPSVVQTDLR

IVF0008656 (gene) of Melon (IVF77) v1 genome