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IVF0008689 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008689
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr05:17366647..17366868
RNA-Seq ExpressionIVF0008689
SyntenyIVF0008689
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035182.1 uncharacterized protein E6C27_scaffold57G002840 [Cucumis melo var. makuwa]4.77e-2979.45Show/hide
Query:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF
        MSK+E++A YN RVLEIAN SFNLGEKISESKIVRK+L SLPGK D+KVT I+EAHDITKLKLDELF SL  F
Subjt:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF

KAA0052224.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.04e-3283.56Show/hide
Query:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF
        M+KEE IA YNVRVLEIANESFNLGEKI ESK+VRKVLRSLP KFD+KVTTI+EAHDIT LKLDELF SL  F
Subjt:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF

KAA0054430.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]6.07e-2976.71Show/hide
Query:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF
        MS++ET+ANYN RV+EIANESFNLG++I E KIVRKVLRSLPGKFD+KV  I+E HDIT LKLDELFESL  F
Subjt:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF

KAA0054957.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.22e-3283.56Show/hide
Query:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF
        MS++ET+  YN RVLEIANESFNLGEKI ESKIVRKVLRSLPGKFD+KVTTI+EAHDITKLKLDELF SL  F
Subjt:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF

TYK21968.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.89e-2978.08Show/hide
Query:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF
        MSK+E++  YN RVLEIAN SFNLGEKISESKIVRK+L SLPGK D+KVT I+EAHDITKLKLDELF SL  F
Subjt:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF

TrEMBL top hitse value%identityAlignment
A0A5A7SVB2 Uncharacterized protein1.0e-2179.45Show/hide
Query:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF
        MSK+E++A YN RVLEIAN SFNLGEKISESKIVRK+L SLPGK D+KVT I+EAHDITKLKLDELF SL  F
Subjt:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF

A0A5A7UA40 Gag-pol polyprotein3.1e-2383.56Show/hide
Query:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF
        M+KEE IA YNVRVLEIANESFNLGEKI ESK+VRKVLRSLP KFD+KVTTI+EAHDIT LKLDELF SL  F
Subjt:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF

A0A5D3CW16 Gag-proteinase polyprotein2.9e-2176.71Show/hide
Query:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF
        MS++ET+ANYN RV+EIANESFNLG++I E KIVRKVLRSLPGKFD+KV  I+E HDIT LKLDELFESL  F
Subjt:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF

A0A5D3DGL3 Putative mitochondrial protein6.3e-2483.56Show/hide
Query:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF
        MS++ET+  YN RVLEIANESFNLGEKI ESKIVRKVLRSLPGKFD+KVTTI+EAHDITKLKLDELF SL  F
Subjt:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF

A0A5D3DVN4 Gag-pol polyprotein2.9e-2178.08Show/hide
Query:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF
        MS++E +A YN RVLEIAN+SFNLGEKI ESKIV+KVLRSLPGKFD+KVTTI+E  DITKLKLDELF SL  F
Subjt:  MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAAAGAAGAGACTATTGCTAACTACAATGTGAGAGTTCTTGAAATTGCAAATGAGTCCTTTAATCTTGGAGAGAAGATATCTGAATCAAAGATAGTGCGCAAAGT
GTTACGTTCCTTGCCTGGAAAGTTTGATATAAAGGTAACCACTATAAAGGAAGCTCATGATATTACTAAATTAAAACTAGATGAACTCTTTGAATCTCTAACTATTTTTT
AG
mRNA sequenceShow/hide mRNA sequence
ATGTCTAAAGAAGAGACTATTGCTAACTACAATGTGAGAGTTCTTGAAATTGCAAATGAGTCCTTTAATCTTGGAGAGAAGATATCTGAATCAAAGATAGTGCGCAAAGT
GTTACGTTCCTTGCCTGGAAAGTTTGATATAAAGGTAACCACTATAAAGGAAGCTCATGATATTACTAAATTAAAACTAGATGAACTCTTTGAATCTCTAACTATTTTTT
AG
Protein sequenceShow/hide protein sequence
MSKEETIANYNVRVLEIANESFNLGEKISESKIVRKVLRSLPGKFDIKVTTIKEAHDITKLKLDELFESLTIF