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IVF0008720 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008720
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr04:9890714..9891092
RNA-Seq ExpressionIVF0008720
SyntenyIVF0008720
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]1.99e-1489.74Show/hide
Query:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFNN
        MLFIWISSHLRYPNNFGYPQIKF+S WN TRNTIREFN+
Subjt:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFNN

KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]6.98e-5875.2Show/hide
Query:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFNN------------WMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLAFYPAIRFMEGHCLFSS
        MLFIWISSHLRYPNNFGYPQIKFSS WN TRNTIREFN+            WMQFFSHLT +EAIWRAPWM TSPLTY CGKLAF   +    GHCLFSS
Subjt:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFNN------------WMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLAFYPAIRFMEGHCLFSS

Query:  FGTTSIMVKTICASYMWARRLGILV
        FG TSIMVKTICAS MW RRLGIL+
Subjt:  FGTTSIMVKTICASYMWARRLGILV

KGN65326.1 hypothetical protein Csa_019937 [Cucumis sativus]2.98e-3050Show/hide
Query:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFN------------NWMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLAFYPAIRFMEGHCLFSS
        MLFIWISSHL+YP+ FG P+I+FSS WN TRNT+++FN            +WM+FF H+T+ E +WRAPW+ TSPL      +A Y   R M   CLFS 
Subjt:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFN------------NWMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLAFYPAIRFMEGHCLFSS

Query:  FGTTSIMV
         G  + MV
Subjt:  FGTTSIMV

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.32e-3375Show/hide
Query:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFNN------------WMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLA
        MLFIWISSHLRYPNNFGY QIKFSS WNNTRNTIREFN+            WMQFFSHLT ++AIWRAPWM TSPLT+ CGKLA
Subjt:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFNN------------WMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLA

XP_031739496.1 uncharacterized protein LOC116403043 [Cucumis sativus]4.73e-1238.2Show/hide
Query:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFN------------NWMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLAFYPAI
        +L+IWI SH+++P  F  P+++FSS WN  RNTI EF              W+ FFS L+  + IW+A WM    + Y CG     P +
Subjt:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFN------------NWMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLAFYPAI

TrEMBL top hitse value%identityAlignment
A0A0A0LZC9 Uncharacterized protein6.3e-2350Show/hide
Query:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFN------------NWMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLAFYPAIRFMEGHCLFSS
        MLFIWISSHL+YP+ FG P+I+FSS WN TRNT+++FN            +WM+FF H+T+ E +WRAPW+ TSPL      +A Y   R M   CLFS 
Subjt:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFN------------NWMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLAFYPAIRFMEGHCLFSS

Query:  FGTTSIMV
         G  + MV
Subjt:  FGTTSIMV

A0A5A7SUT0 Reverse transcriptase5.0e-1289.74Show/hide
Query:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFNN
        MLFIWISSHLRYPNNFGYPQIKF+S WN TRNTIREFN+
Subjt:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFNN

A0A5A7VHI3 Uncharacterized protein1.8e-4675.2Show/hide
Query:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFNN------------WMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLAFYPAIRFMEGHCLFSS
        MLFIWISSHLRYPNNFGYPQIKFSS WN TRNTIREFN+            WMQFFSHLT +EAIWRAPWM TSPLTY CGKLAF   +    GHCLFSS
Subjt:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFNN------------WMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLAFYPAIRFMEGHCLFSS

Query:  FGTTSIMVKTICASYMWARRLGILV
        FG TSIMVKTICAS MW RRLGIL+
Subjt:  FGTTSIMVKTICASYMWARRLGILV

A0A5D3D0S2 Glial fibrillary acidic protein-like3.8e-2865.66Show/hide
Query:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFNN------------WMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLAFYPAIRFMEGHCLFS
        MLFIWISSHLRYPNNFGY QIKFSS WNNTRNTIREFN+            WMQFFSHLT ++AIWRAPWM TSPLT+ CGKLA    +    G   +S
Subjt:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFNN------------WMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLAFYPAIRFMEGHCLFS

A0A6J1DB13 uncharacterized protein LOC1110188208.0e-1039.33Show/hide
Query:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFN------------NWMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLAFYPAI
        +L+IWI SH+  P  F  PQ+KFS  W+  +N I EFN             W  FF+ L   +  WRA WM+T P+ Y CGK    P +
Subjt:  MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFN------------NWMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLAFYPAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTCATTTGGATTTCTAGTCATCTAAGGTATCCTAATAATTTTGGATATCCTCAGATAAAATTTAGCAGTCTGTGGAATAATACCAGAAACACTATCAGA
GAATTCAATAATTGGATGCAATTTTTCAGCCATTTAACAATAGTAGAAGCAATTTGGAGAGCTCCTTGGATGACCACAAGTCCTTTGACATACCATTGTGGAAAA
TTGGCTTTTTATCCTGCTATTAGGTTTATGGAGGGGCATTGCTTATTCTCCTCTTTTGGTACTACGTCAATTATGGTCAAAACAATTTGCGCCAGTTATATGTGG
GCTAGAAGATTAGGAATTCTCGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTCATTTGGATTTCTAGTCATCTAAGGTATCCTAATAATTTTGGATATCCTCAGATAAAATTTAGCAGTCTGTGGAATAATACCAGAAACACTATCAGA
GAATTCAATAATTGGATGCAATTTTTCAGCCATTTAACAATAGTAGAAGCAATTTGGAGAGCTCCTTGGATGACCACAAGTCCTTTGACATACCATTGTGGAAAA
TTGGCTTTTTATCCTGCTATTAGGTTTATGGAGGGGCATTGCTTATTCTCCTCTTTTGGTACTACGTCAATTATGGTCAAAACAATTTGCGCCAGTTATATGTGG
GCTAGAAGATTAGGAATTCTCGTATGA
Protein sequenceShow/hide protein sequence
MLFIWISSHLRYPNNFGYPQIKFSSLWNNTRNTIREFNNWMQFFSHLTIVEAIWRAPWMTTSPLTYHCGKLAFYPAIRFMEGHCLFSSFGTTSIMVKTICASYMW
ARRLGILV