; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0008755 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008755
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibosome-recycling factor, chloroplastic
Genome locationchr05:2826167..2833110
RNA-Seq ExpressionIVF0008755
SyntenyIVF0008755
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0032544 - plastid translation (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR002661 - Ribosome recycling factor
IPR023584 - Ribosome recycling factor domain
IPR036191 - RRF superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140097.1 ribosome-recycling factor, chloroplastic isoform X1 [Cucumis sativus]1.77e-14583.15Show/hide
Query:  MATPFSATTSIRRSLFHNPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE
        MATPFSAT SIRRSLF NPPPK    S   YNGGLNCVKCGS +AHLCSWKSASNYVRLN++AL++STQLSVSGNV KNRR VVRAATIEEIEAEKTLIE
Subjt:  MATPFSATTSIRRSLFHNPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE

Query:  KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT
        KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLT
Subjt:  KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT

Query:  SERRK--------QAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        SERRK        QA  G      +  + ++ Y     EKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  SERRK--------QAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_008449432.1 PREDICTED: ribosome-recycling factor, chloroplastic isoform X1 [Cucumis melo]1.84e-15487.46Show/hide
Query:  MATPFSATTSIRRSLFHNPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE
        MATPFSATTSIRRSLFHNPPPKP   S   YNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE
Subjt:  MATPFSATTSIRRSLFHNPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE

Query:  KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT
        KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT
Subjt:  KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT

Query:  SERRK--------QAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        SERRK        QA  G      +  + ++ Y     EKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  SERRK--------QAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_008449433.1 PREDICTED: ribosome-recycling factor, chloroplastic isoform X2 [Cucumis melo]6.87e-15287.1Show/hide
Query:  MATPFSATTSIRRSLFHNPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE
        MATPFSATTSIRRSLFHNPPPKP   S   YNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNR GVVRAATIEEIEAEKTLIE
Subjt:  MATPFSATTSIRRSLFHNPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE

Query:  KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT
        KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT
Subjt:  KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT

Query:  SERRK--------QAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        SERRK        QA  G      +  + ++ Y     EKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  SERRK--------QAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_011657524.1 ribosome-recycling factor, chloroplastic isoform X2 [Cucumis sativus]3.28e-14382.8Show/hide
Query:  MATPFSATTSIRRSLFHNPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE
        MATPFSAT SIRRSLF NPPPK    S   YNGGLNCVKCGS +AHLCSWKSASNYVRLN++AL++STQLSVSGNV KNR  VVRAATIEEIEAEKTLIE
Subjt:  MATPFSATTSIRRSLFHNPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE

Query:  KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT
        KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLT
Subjt:  KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT

Query:  SERRK--------QAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        SERRK        QA  G      +  + ++ Y     EKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  SERRK--------QAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

XP_038888223.1 ribosome-recycling factor, chloroplastic isoform X1 [Benincasa hispida]1.32e-14381.56Show/hide
Query:  MATPFSATTSIRRSLFH---NPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKT
        MATPFS+TTS+RRS+F    NPPPK    S   YN GLNCVKCGSS+ HLCSWKSASNYVRL+++AL+LSTQLSVSGN+LKNRRGVVRAATIEEIEAEKT
Subjt:  MATPFSATTSIRRSLFH---NPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKT

Query:  LIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLP
        LIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLP
Subjt:  LIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLP

Query:  QLTSERRK--------QAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        QLTSERRK        QA  G      +  + ++ Y     EKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEKELLKV
Subjt:  QLTSERRK--------QAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

TrEMBL top hitse value%identityAlignment
A0A0A0KJG4 Ribosome-recycling factor, chloroplastic2.1e-11283.15Show/hide
Query:  MATPFSATTSIRRSLFHNPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE
        MATPFSAT SIRRSLF NPPPK    S   YNGGLNCVKCGS +AHLCSWKSASNYVRLN++AL++STQLSVSGNV KNRR VVRAATIEEIEAEKTLIE
Subjt:  MATPFSATTSIRRSLFHNPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE

Query:  KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT
        KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLT
Subjt:  KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT

Query:  SERR--------KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        SERR        KQA  G      +  + ++ Y     EKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  SERR--------KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

A0A1S3BMN4 Ribosome-recycling factor, chloroplastic3.0e-11987.46Show/hide
Query:  MATPFSATTSIRRSLFHNPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE
        MATPFSATTSIRRSLFHNPPPK P  S   YNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE
Subjt:  MATPFSATTSIRRSLFHNPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE

Query:  KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT
        KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT
Subjt:  KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT

Query:  SERR--------KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        SERR        KQA  G      +  + ++ Y     EKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  SERR--------KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

A0A1S3BMY6 Ribosome-recycling factor, chloroplastic2.8e-11787.1Show/hide
Query:  MATPFSATTSIRRSLFHNPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE
        MATPFSATTSIRRSLFHNPPPK P  S   YNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKN RGVVRAATIEEIEAEKTLIE
Subjt:  MATPFSATTSIRRSLFHNPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIE

Query:  KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT
        KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT
Subjt:  KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLT

Query:  SERR--------KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        SERR        KQA  G      +  + ++ Y     EKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
Subjt:  SERR--------KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

A0A5A7URP7 Ribosome-recycling factor, chloroplastic8.1e-10180.15Show/hide
Query:  YNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRR-----------------------GVVRAATIEEIEAEKTLIEKDVKARM
        YNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNR                        GVVRAATIEEIEAEKTLIEKDVKARM
Subjt:  YNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRR-----------------------GVVRAATIEEIEAEKTLIEKDVKARM

Query:  EKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR---
        EKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR   
Subjt:  EKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR---

Query:  -----KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEK
             KQA  G      +  + ++ Y     EKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEK
Subjt:  -----KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEK

A0A6J1DZ32 Ribosome-recycling factor, chloroplastic4.9e-9873.08Show/hide
Query:  MATPFSATTSIRRSLFHNPPPKPPSHSEVH-------YNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIE
        MATPFS T S+ RS+F       P H+          YNGGLNCVKCG ++AH+ SW SA+NYVRL + AL++S+ + VSG++LKNRRGVV+AATIEEIE
Subjt:  MATPFSATTSIRRSLFHNPPPKPPSHSEVH-------YNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIE

Query:  AEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIR
        AEKTLIEKDV++RMEKTIDTVRSNFNSIRTGR+NP+MLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIR
Subjt:  AEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIR

Query:  LTLPQLTSERR--------KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        LTLPQLTSERR        KQA  G      +  + ++ Y     EKKLSEDNVKDLSSDLQKLTDDYMKKIDV+YKQKEKELLKV
Subjt:  LTLPQLTSERR--------KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

SwissProt top hitse value%identityAlignment
A2YMU2 Ribosome-recycling factor, chloroplastic3.5e-6157.02Show/hide
Query:  SASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI
        S++N++ L    +   ++  +  N   ++R V+R ATIEEIEAEK++IE   + RMEK I+TV++NFN++RTGR+NPAMLD+IEVEYYG+PV+LKSIAQI
Subjt:  SASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI

Query:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKQ--------AVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLS
        +TPDA+SLL+QPYDKSSLK IEK IV ++LG+TP+NDGEVIR+T+P LTS+RRK+        A  G      +  + I+ Y     EKKLSEDNVKDLS
Subjt:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKQ--------AVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLS

Query:  SDLQKLTDDYMKKIDVLYKQKEKELLKV
        +DLQK+TD+YMKKI+ + KQKE+EL+K+
Subjt:  SDLQKLTDDYMKKIDVLYKQKEKELLKV

A3BLC3 Ribosome-recycling factor, chloroplastic3.5e-6157.02Show/hide
Query:  SASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI
        S++N++ L    +   ++  +  N   ++R V+R ATIEEIEAEK++IE   + RMEK I+TV++NFN++RTGR+NPAMLD+IEVEYYG+PV+LKSIAQI
Subjt:  SASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI

Query:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKQ--------AVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLS
        +TPDA+SLL+QPYDKSSLK IEK IV ++LG+TP+NDGEVIR+T+P LTS+RRK+        A  G      +  + I+ Y     EKKLSEDNVKDLS
Subjt:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKQ--------AVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLS

Query:  SDLQKLTDDYMKKIDVLYKQKEKELLKV
        +DLQK+TD+YMKKI+ + KQKE+EL+K+
Subjt:  SDLQKLTDDYMKKIDVLYKQKEKELLKV

P37706 Ribosome-recycling factor, chloroplastic (Fragment)1.4e-6560.87Show/hide
Query:  WKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIA
        W +A+NYV++       + +  V   + + R G ++ AT+EEIEAEK+LIEK VK RMEKTI+ V+++FNSIRT RSNP MLDKI+VEYYG+P SLKSIA
Subjt:  WKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIA

Query:  QISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR--------KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKD
        QISTPD+SSLLV PYDKSSLK IEKAIVNSDLG+TPNNDG+VIRL++PQLT++RR        KQA  G      +  + I+ Y     EKKLSEDNVKD
Subjt:  QISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR--------KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKD

Query:  LSSDLQKLTDDYMKKIDVLYKQKEKELLKV
        LSSDLQK+ D+Y+KK+D ++KQKEKEL+ V
Subjt:  LSSDLQKLTDDYMKKIDVLYKQKEKELLKV

P82231 Ribosome-recycling factor, chloroplastic1.6e-6959.35Show/hide
Query:  GLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDK
        G++ ++C  +  ++  W+S++NYVR++      S + +V    L+NR G  R AT+EE+EAEK+LIE + K RMEKTI+T+RSNFNS+RT R++P MLD+
Subjt:  GLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDK

Query:  IEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKQ---AVSGAYYCDVLFINNIQK-----Y
        IEVEYYG+PVSLKSIAQISTPDASSLL+ PYDKSSLK+IEKAIV S LG++PNNDGEVIRL+LP LTS+RRK+    VS       + + NI++     Y
Subjt:  IEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKQ---AVSGAYYCDVLFINNIQK-----Y

Query:  PNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV
             EKKLSEDNVKDLS+DLQKLTD+YMKK++ +YKQKE+EL+KV
Subjt:  PNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV

Q9M1X0 Ribosome-recycling factor, chloroplastic2.5e-6767.27Show/hide
Query:  LLLSTQLSVSGNVLKNR----RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSL
        L L   +++SG  +  R    R V+R+ATIEEIEAEK+ IE DVK++MEKTI+T+R++FNSIRTGRSN AMLDKIEVEYYGSPVSLKSIAQISTPD SSL
Subjt:  LLLSTQLSVSGNVLKNR----RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSL

Query:  LVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR--------KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTD
        L+QPYDKSSLK+IEKAIVNSDLG+TPNNDG+VIRL+LP LTS+RR        KQ+  G      +  + ++ Y     EKKLSEDNVKDLSSDLQKL D
Subjt:  LVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR--------KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTD

Query:  DYMKKIDVLYKQKEKELLKV
         YMKKI+ LYKQKEKEL+KV
Subjt:  DYMKKIDVLYKQKEKELLKV

Arabidopsis top hitse value%identityAlignment
AT3G01800.1 Ribosome recycling factor2.9e-1832.39Show/hide
Query:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQ
        ++    ++ME  ID +  +   +RTGR+ P MLD I VE  G  + L  +A +S  D  +L V PYD  ++K +EKAIV S LGL P  DG+ +  ++P 
Subjt:  IEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQ

Query:  LTSERRKQAVSGAYYCDVLFINNIQKYPNSLLE------KKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKEL
        LT E  +           +   +I++     L+        L +D VK L  ++ +LT  ++K  + + K KEKE+
Subjt:  LTSERRKQAVSGAYYCDVLFINNIQKYPNSLLE------KKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKEL

AT3G63190.1 ribosome recycling factor, chloroplast precursor1.8e-6867.27Show/hide
Query:  LLLSTQLSVSGNVLKNR----RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSL
        L L   +++SG  +  R    R V+R+ATIEEIEAEK+ IE DVK++MEKTI+T+R++FNSIRTGRSN AMLDKIEVEYYGSPVSLKSIAQISTPD SSL
Subjt:  LLLSTQLSVSGNVLKNR----RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSL

Query:  LVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR--------KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTD
        L+QPYDKSSLK+IEKAIVNSDLG+TPNNDG+VIRL+LP LTS+RR        KQ+  G      +  + ++ Y     EKKLSEDNVKDLSSDLQKL D
Subjt:  LVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR--------KQAVSGAYYCDVLFINNIQKYPNSLLEKKLSEDNVKDLSSDLQKLTD

Query:  DYMKKIDVLYKQKEKELLKV
         YMKKI+ LYKQKEKEL+KV
Subjt:  DYMKKIDVLYKQKEKELLKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCCCCTTCTCCGCCACCACCTCTATCCGCCGTTCCCTCTTCCATAATCCCCCTCCCAAACCCCCCTCTCACTCCGAGGTACATTATAATGGAGGGTTAAATTG
CGTCAAATGCGGCTCCAGTTCTGCGCATCTTTGTTCATGGAAGTCAGCTTCCAACTACGTCAGGCTCAACCAACGAGCCCTATTGCTCTCTACCCAACTCTCTGTTTCTG
GGAATGTGTTGAAAAACAGAAGGGGAGTTGTGAGGGCTGCAACAATCGAAGAAATTGAAGCAGAGAAAACATTGATCGAGAAAGATGTAAAAGCAAGGATGGAAAAGACT
ATTGATACTGTTCGGTCTAATTTCAATTCAATTAGGACCGGGAGATCAAATCCTGCCATGCTTGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAG
CATTGCTCAAATTAGTACACCTGATGCAAGCTCACTCTTGGTCCAGCCATATGATAAATCCAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGATTGA
CTCCAAACAATGATGGAGAAGTCATACGGTTGACTCTCCCTCAACTCACATCCGAAAGAAGAAAGCAGGCGGTCAGTGGTGCATACTACTGTGATGTCCTTTTCATCAAC
AACATCCAGAAATATCCTAATTCACTCCTTGAGAAAAAACTTTCGGAAGATAATGTTAAGGACTTGTCAAGTGATTTGCAGAAACTGACGGATGACTATATGAAGAAGAT
TGATGTCTTATACAAGCAAAAAGAGAAGGAATTGTTGAAGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCCCCTTCTCCGCCACCACCTCTATCCGCCGTTCCCTCTTCCATAATCCCCCTCCCAAACCCCCCTCTCACTCCGAGGTACATTATAATGGAGGGTTAAATTG
CGTCAAATGCGGCTCCAGTTCTGCGCATCTTTGTTCATGGAAGTCAGCTTCCAACTACGTCAGGCTCAACCAACGAGCCCTATTGCTCTCTACCCAACTCTCTGTTTCTG
GGAATGTGTTGAAAAACAGAAGGGGAGTTGTGAGGGCTGCAACAATCGAAGAAATTGAAGCAGAGAAAACATTGATCGAGAAAGATGTAAAAGCAAGGATGGAAAAGACT
ATTGATACTGTTCGGTCTAATTTCAATTCAATTAGGACCGGGAGATCAAATCCTGCCATGCTTGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAG
CATTGCTCAAATTAGTACACCTGATGCAAGCTCACTCTTGGTCCAGCCATATGATAAATCCAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGATTGA
CTCCAAACAATGATGGAGAAGTCATACGGTTGACTCTCCCTCAACTCACATCCGAAAGAAGAAAGCAGGCGGTCAGTGGTGCATACTACTGTGATGTCCTTTTCATCAAC
AACATCCAGAAATATCCTAATTCACTCCTTGAGAAAAAACTTTCGGAAGATAATGTTAAGGACTTGTCAAGTGATTTGCAGAAACTGACGGATGACTATATGAAGAAGAT
TGATGTCTTATACAAGCAAAAAGAGAAGGAATTGTTGAAGGTATGA
Protein sequenceShow/hide protein sequence
MATPFSATTSIRRSLFHNPPPKPPSHSEVHYNGGLNCVKCGSSSAHLCSWKSASNYVRLNQRALLLSTQLSVSGNVLKNRRGVVRAATIEEIEAEKTLIEKDVKARMEKT
IDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKQAVSGAYYCDVLFIN
NIQKYPNSLLEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV