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IVF0008767 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008767
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr10:18337415..18337924
RNA-Seq ExpressionIVF0008767
SyntenyIVF0008767
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054520.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]1.41e-1541.82Show/hide
Query:  HPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKVI
        H   KGFL   F      +Y+     R      ETF  V SNV GGYEGF  +DGN+++ PM+Y QGLD    DIMGT+P   SE   +QA+ +GS +  
Subjt:  HPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKVI

Query:  RLKPLTSFAM
          K   SF +
Subjt:  RLKPLTSFAM

KAA0056167.1 retrotransposon protein [Cucumis melo var. makuwa]1.29e-1545.74Show/hide
Query:  MGLGHPTAKGFLRNPFPITTCPTYLERSCY-----RSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSE
        +   H  AKG L   F      ++ +  CY       T    ETF +V SNV+GGYEGF+ +DGND+E P +Y QGLD S DDIMGTRP + S+
Subjt:  MGLGHPTAKGFLRNPFPITTCPTYLERSCY-----RSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSE

KAA0056468.1 retrotransposon protein [Cucumis melo var. makuwa]1.56e-82100Show/hide
Query:  GHPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKV
        GHPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKV
Subjt:  GHPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKV

Query:  IRLKPLTSFAMQWNLRMAS
        IRLKPLTSFAMQWNLRMAS
Subjt:  IRLKPLTSFAMQWNLRMAS

TYJ98275.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]6.09e-1549.35Show/hide
Query:  ETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKVIRLKPLTSFAM
        ETF  V SNV GGYEGF  +DGN+++ PM+Y QGLD    DIMGT+P   SE   +QA+ +GS +    K   SF +
Subjt:  ETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKVIRLKPLTSFAM

TYK29059.1 retrotransposon protein [Cucumis melo var. makuwa]5.98e-82100Show/hide
Query:  GHPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKV
        GHPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKV
Subjt:  GHPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKV

Query:  IRLKPLTSFAMQWNLRMAS
        IRLKPLTSFAMQWNLRMAS
Subjt:  IRLKPLTSFAMQWNLRMAS

TrEMBL top hitse value%identityAlignment
A0A5A7UMZ6 Retrotransposon protein6.7e-63100Show/hide
Query:  GHPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKV
        GHPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKV
Subjt:  GHPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKV

Query:  IRLKPLTSFAMQWNLRMAS
        IRLKPLTSFAMQWNLRMAS
Subjt:  IRLKPLTSFAMQWNLRMAS

A0A5A7UNI7 Retrotransposon protein8.3e-1345.74Show/hide
Query:  MGLGHPTAKGFLRNPFPITTCPTYLERSCY-----RSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSE
        +   H  AKG L   F      ++ +  CY       T    ETF +V SNV+GGYEGF+ +DGND+E P +Y QGLD S DDIMGTRP + S+
Subjt:  MGLGHPTAKGFLRNPFPITTCPTYLERSCY-----RSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSE

A0A5A7V6F5 Retrotransposon protein1.6e-1152.27Show/hide
Query:  LGHPTAKGFLRNPFPITTCPTY-LERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSE
        L HP AKG L  PF      TY L+RS  R+T R +ETF  V SN LGGYEGF + DGN+ E P VY QG+D S D++  +RP R  E
Subjt:  LGHPTAKGFLRNPFPITTCPTY-LERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSE

A0A5D3CIS8 Retrotransposon protein1.6e-1147.19Show/hide
Query:  MGLGHPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSE
        +   H  AKG L   F       Y        T    ETF +V SNV+GGYEGF+ +DGND+E P +Y QGLD S DDIMGTRP + S+
Subjt:  MGLGHPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSE

A0A5D3E057 Retrotransposon protein6.7e-63100Show/hide
Query:  GHPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKV
        GHPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKV
Subjt:  GHPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKV

Query:  IRLKPLTSFAMQWNLRMAS
        IRLKPLTSFAMQWNLRMAS
Subjt:  IRLKPLTSFAMQWNLRMAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGGGTCATCCTACTGCTAAGGGCTTCCTAAGAAATCCTTTCCCCATTACGACTTGTCCTACGTATTTGGAAAGATCATGCTACAGGAGCACACGTAGAGAGTC
AGAGACATTCGCCCATGTGAGGTCAAATGTGTTAGGAGGGTACGAGGGATTTCTCGTTGACGATGGGAACGATTTGGAGACCCCTATGGTGTATGGTCAGGGACTAGACA
AGTCACATGACGACATCATGGGTACACGACCTGGTCGCTTAAGTGAGGTAGGAATGCTTCAAGCGGAAGCAAGAGGAAGTGAGAAGGTCATACGGCTGAAACCATTGACA
TCATTCGCAATGCAATGGAATTTGCGAATGGCAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTGGGTCATCCTACTGCTAAGGGCTTCCTAAGAAATCCTTTCCCCATTACGACTTGTCCTACGTATTTGGAAAGATCATGCTACAGGAGCACACGTAGAGAGTC
AGAGACATTCGCCCATGTGAGGTCAAATGTGTTAGGAGGGTACGAGGGATTTCTCGTTGACGATGGGAACGATTTGGAGACCCCTATGGTGTATGGTCAGGGACTAGACA
AGTCACATGACGACATCATGGGTACACGACCTGGTCGCTTAAGTGAGGTAGGAATGCTTCAAGCGGAAGCAAGAGGAAGTGAGAAGGTCATACGGCTGAAACCATTGACA
TCATTCGCAATGCAATGGAATTTGCGAATGGCAAGTTGA
Protein sequenceShow/hide protein sequence
MGLGHPTAKGFLRNPFPITTCPTYLERSCYRSTRRESETFAHVRSNVLGGYEGFLVDDGNDLETPMVYGQGLDKSHDDIMGTRPGRLSEVGMLQAEARGSEKVIRLKPLT
SFAMQWNLRMAS