CuGenDBv2

Gene ID	IVF0008789
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transposon Tf2-1 polyprotein isoform X1
Genome location	chr02:7660636..7660896
RNA-Seq Expression	IVF0008789
Synteny	IVF0008789
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0035246 - peptidyl-arginine N-methylation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0016274 - protein-arginine N-methyltransferase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0055926.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]

5.90e-51

98.77

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Query:  MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKG
        MDSKGEGKAEEEPTMD+SKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKG
Subjt:  MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKG

KAA0057269.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]

4.37e-51

91.86

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Query:  MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK
        MDSKGEGKAEE P MD+SKFKKVEMP+F GTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGP LDWYRSQEERE FKGWQDLK
Subjt:  MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK

KAA0066119.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]

1.10e-45

89.41

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Query:  DSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK
        D K E K EE P MD+SKFKKVEMPIF GTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEERE FKGWQDLK
Subjt:  DSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK

TYK15159.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]

2.11e-46

89.41

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Query:  DSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK
        D K E K EE P MD+SKFKKVEMPIF GTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEERE FKGWQDLK
Subjt:  DSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK

TYK28131.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]

1.56e-57

100

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Query:  MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK
        MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK
Subjt:  MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T449 Ty3-gypsy retrotransposon protein

5.8e-37

89.41

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Query:  DSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK
        D K EGK EE P MD+SKFKKVEMPIF GTDPDSWLFRADRYFKIHNLSDSEKLTVA+ISFDGPALDWYRSQEERE FKGWQDLK
Subjt:  DSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK

A0A5A7UNQ9 Transposon Tf2-1 polyprotein isoform X1

6.2e-39

97.56

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Query:  MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGW
        MDSKGEGKAEEEPTMD+SKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKG+
Subjt:  MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGW

A0A5D3D2W5 Ty3-gypsy retrotransposon protein

4.5e-37

90.59

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Query:  DSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK
        D K EGK EE P MD+SKFKKVEMPIF GTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEERE FKGWQDLK
Subjt:  DSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK

A0A5D3DWG6 Transposon Tf2-1 polyprotein isoform X1

2.8e-39

91.86

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Query:  MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK
        MDSKGEGKAEE P MD+SKFKKVEMP+F GTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGP LDWYRSQEERE FKGWQDLK
Subjt:  MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK

A0A5D3DWX0 Transposon Tf2-1 polyprotein isoform X1

7.1e-43

100

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Query:  MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK
        MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK
Subjt:  MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G67020.1 unknown protein

1.5e-08

26.74

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Query:  MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK
        M  +G G++        S  +++EMP+F+G+    W  + +R+F++    DS+KL +  +S +G AL W+  +     F+ W   +
Subjt:  MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK

AT3G44713.1 unknown protein

1.7e-04

28.57

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Query:  PIFNGTDPD--SWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK
        P FNG   +  SW+   + +F   N +D EK+ +A    +G A  W+  +++  +F+ W+ L+
Subjt:  PIFNGTDPD--SWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK

Sequences

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CDS sequence

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ATGGACTCGAAGGGAGAAGGAAAGGCCGAAGAAGAACCAACGATGGATCAGAGTAAGTTTAAAAAGGTGGAAATGCCGATTTTCAATGGGACCGACCCGGACTCGTGGCT
ATTCAGAGCCGACAGGTACTTCAAAATACACAACCTATCTGATTCAGAAAAACTAACCGTTGCTGTCATCAGCTTCGACGGACCGGCGTTGGATTGGTATAGGTCTCAAG
AAGAGAGGGAAGTATTCAAGGGGTGGCAAGATTTGAAATAA

mRNA sequence

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Protein sequence

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MDSKGEGKAEEEPTMDQSKFKKVEMPIFNGTDPDSWLFRADRYFKIHNLSDSEKLTVAVISFDGPALDWYRSQEEREVFKGWQDLK

IVF0008789 (gene) of Melon (IVF77) v1 genome