; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0008837 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008837
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionnuclear transport factor 2-like
Genome locationchr07:22499824..22501465
RNA-Seq ExpressionIVF0008837
SyntenyIVF0008837
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0044613 - nuclear pore central transport channel (cellular component)
InterPro domainsIPR002075 - Nuclear transport factor 2
IPR018222 - Nuclear transport factor 2, eukaryote
IPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53044.1 hypothetical protein Csa_014783 [Cucumis sativus]3.99e-7991.87Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MDPD +AKAFVDHYYSTFDANRA LGNLYQ+NSMLTFEGQKIQGS NIVAKL+SLPFQQCKH+VST+DCQPSGP+GGMLVFVSGNLQL GEQHALKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSFFVQNDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

XP_004152114.2 nuclear transport factor 2B [Cucumis sativus]7.50e-8091.87Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MDPD +AKAFVDHYYSTFDANRA LGNLYQ+NSMLTFEGQKIQGS NIVAKL+SLPFQQCKH+VST+DCQPSGP+GGMLVFVSGNLQL GEQHALKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSFFVQNDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

XP_008454013.1 PREDICTED: nuclear transport factor 2-like [Cucumis melo]5.93e-86100Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSFFVQNDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

XP_022979987.1 nuclear transport factor 2B [Cucurbita maxima]2.52e-7890.24Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MDPD +AKAFVDHYYSTFDANRAGL NLYQ+NSMLTFEGQKIQGS NIVAKLTSLPFQQC+H+VST+DCQPSGP+GGMLVFVSGNLQL GEQHALKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSF+V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

XP_038694113.1 nuclear transport factor 2B [Tripterygium wilfordii]5.08e-7889.43Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MDPD +AKAFV+HYYSTFDANR+GL NLYQE SMLTFEGQKIQGS+NIVAKLTSLPFQQCKH++ST+DCQPSGP+GGMLVFVSGNLQLVGEQHALKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSF+V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

TrEMBL top hitse value%identityAlignment
A0A0A0KW20 NTF2 domain-containing protein3.1e-6091.87Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MDPD +AKAFVDHYYSTFDANRA LGNLYQ+NSMLTFEGQKIQGS NIVAKL+SLPFQQCKH+VST+DCQPSGP+GGMLVFVSGNLQL GEQHALKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSFFVQNDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

A0A1S3BXM4 nuclear transport factor 2-like7.2e-65100Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSFFVQNDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

A0A6J1F2G7 nuclear transport factor 2B-like1.3e-5889.43Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MDPD +AKAFVDHYYSTFDANR+GL NLYQ+NSMLTFEGQKIQGS NIVAKLTSLPFQQC+H+VST+DCQPSGPSGG+LVFVSGNLQL GEQHALKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSF+V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

A0A6J1IQ79 nuclear transport factor 2B4.5e-5990.24Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MDPD +AKAFVDHYYSTFDANRAGL NLYQ+NSMLTFEGQKIQGS NIVAKLTSLPFQQC+H+VST+DCQPSGP+GGMLVFVSGNLQL GEQHALKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSF+V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

A0A7J7BYM6 Nuclear transport factor 2-like7.8e-5989.43Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MDPD +AKAFV+HYYSTFDANR+GL NLYQE SMLTFEGQKIQGS+NIVAKLTSLPFQQCKH++ST+DCQPSGP+GGMLVFVSGNLQLVGEQHALKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSF+V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

SwissProt top hitse value%identityAlignment
Q75AA5 Nuclear transport factor 21.3e-3152.03Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MD   LA+ F + YY+ FD +R+ LGNLY++ SMLTFE  ++QG+ +IV KL SLPFQ+ +H ++T+D QP+ P+G +LV ++G+L +  EQ+A +FSQ+
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMP    S++V NDIFRLNY+
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

Q96VN3 Nuclear transport factor 23.0e-3154.55Show/hide
Query:  DPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMF
        D  ++A+ FV  YY TFD NRAGL  LY+++SMLTFE   IQG   I+ KLTSLPFQ+ +H VST+D QPSG  GG+LV V+G L +  E++ + ++Q F
Subjt:  DPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMF

Query:  HLMPTPQGSFFVQNDIFRLNY
         LMP   GS+FV ND+FRL Y
Subjt:  HLMPTPQGSFFVQNDIFRLNY

Q9C7F5 Nuclear transport factor 2B1.6e-5682.93Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MDPD ++KAFV+HYYSTFD NR GL  LYQE SMLTFEGQKIQG  +IVAKLTSLPFQQCKH++ST+DCQPSGP+ GMLVFVSGNLQL GE+HALKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSF+V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

Q9FZK4 Nuclear transport factor 2A1.9e-5482.11Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MDPD +AKAFV+HYYSTFDANR GL +LYQE SMLTFEGQKIQGS NIVAKLT LPFQQCKHN++T+DCQPSGP+GGMLVFVSGNLQL GEQHALKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHL+ + QG+++V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

Q9XJ54 Nuclear transport factor 21.2e-4063.93Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MD D +AKAFV+HYY TFD NR  L +LYQ+ SMLTFEGQ+  G+  I  KL SLPF QC H+++T+DCQPSGP GGMLVFVSG+L+   ++H LKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNY
        F L+P   G+F+VQND+FRLNY
Subjt:  FHLMPTPQGSFFVQNDIFRLNY

Arabidopsis top hitse value%identityAlignment
AT1G11570.1 NTF2-like8.5e-2655.34Show/hide
Query:  DTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPS---GPSGGMLVFVSGNLQLVGEQHALKFSQM
        + +A AFV+HYY  FD +R+ L +LY   S+LTFEGQ I G  NI  KL  LPF QC H +ST+D QPS   G  GG+LVFVSG++QL GE H L+FSQ+
Subjt:  DTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPS---GPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHL
        + L
Subjt:  FHL

AT1G11570.2 NTF2-like1.8e-3659.84Show/hide
Query:  DTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPS---GPSGGMLVFVSGNLQLVGEQHALKFSQM
        + +A AFV+HYY  FD +R+ L +LY   S+LTFEGQ I G  NI  KL  LPF QC H +ST+D QPS   G  GG+LVFVSG++QL GE H L+FSQ 
Subjt:  DTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPS---GPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNY
        FHL+P  QGSFFVQN++FRLNY
Subjt:  FHLMPTPQGSFFVQNDIFRLNY

AT1G27310.1 nuclear transport factor 2A1.4e-5582.11Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MDPD +AKAFV+HYYSTFDANR GL +LYQE SMLTFEGQKIQGS NIVAKLT LPFQQCKHN++T+DCQPSGP+GGMLVFVSGNLQL GEQHALKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHL+ + QG+++V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

AT1G27970.1 nuclear transport factor 2B1.1e-5782.93Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MDPD ++KAFV+HYYSTFD NR GL  LYQE SMLTFEGQKIQG  +IVAKLTSLPFQQCKH++ST+DCQPSGP+ GMLVFVSGNLQL GE+HALKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIFRLNYA
        FHLMPTPQGSF+V NDIFRLNYA
Subjt:  FHLMPTPQGSFFVQNDIFRLNYA

AT1G27970.2 nuclear transport factor 2B1.5e-5482.2Show/hide
Query:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM
        MDPD ++KAFV+HYYSTFD NR GL  LYQE SMLTFEGQKIQG  +IVAKLTSLPFQQCKH++ST+DCQPSGP+ GMLVFVSGNLQL GE+HALKFSQM
Subjt:  MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQM

Query:  FHLMPTPQGSFFVQNDIF
        FHLMPTPQGSF+V NDIF
Subjt:  FHLMPTPQGSFFVQNDIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCCGACACGCTGGCTAAAGCATTCGTCGATCATTATTATTCCACTTTCGACGCCAATCGAGCCGGTCTTGGTAATCTCTACCAAGAAAATTCCATGTTGACGTT
TGAAGGTCAGAAGATCCAAGGCTCTACTAATATCGTCGCCAAGCTCACTAGTCTACCCTTCCAGCAGTGCAAGCACAACGTTAGCACCATCGATTGCCAGCCTTCTGGTC
CTTCTGGTGGCATGCTCGTCTTCGTCAGCGGCAATCTTCAACTCGTTGGCGAACAACATGCTCTCAAATTCAGTCAGATGTTCCATTTGATGCCAACCCCACAAGGAAGC
TTCTTTGTGCAGAACGACATTTTCCGATTGAACTATGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCCGACACGCTGGCTAAAGCATTCGTCGATCATTATTATTCCACTTTCGACGCCAATCGAGCCGGTCTTGGTAATCTCTACCAAGAAAATTCCATGTTGACGTT
TGAAGGTCAGAAGATCCAAGGCTCTACTAATATCGTCGCCAAGCTCACTAGTCTACCCTTCCAGCAGTGCAAGCACAACGTTAGCACCATCGATTGCCAGCCTTCTGGTC
CTTCTGGTGGCATGCTCGTCTTCGTCAGCGGCAATCTTCAACTCGTTGGCGAACAACATGCTCTCAAATTCAGTCAGATGTTCCATTTGATGCCAACCCCACAAGGAAGC
TTCTTTGTGCAGAACGACATTTTCCGATTGAACTATGCCTGA
Protein sequenceShow/hide protein sequence
MDPDTLAKAFVDHYYSTFDANRAGLGNLYQENSMLTFEGQKIQGSTNIVAKLTSLPFQQCKHNVSTIDCQPSGPSGGMLVFVSGNLQLVGEQHALKFSQMFHLMPTPQGS
FFVQNDIFRLNYA