; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0008868 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008868
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L6
Genome locationchr08:13892150..13894243
RNA-Seq ExpressionIVF0008868
SyntenyIVF0008868
Gene Ontology termsGO:0000027 - ribosomal large subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000915 - 60S ribosomal protein L6E
IPR005568 - Ribosomal protein L6, N-terminal
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041997 - Ribosomal Protein L6, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149609.1 60S ribosomal protein L6-2 [Cucumis sativus]6.95e-14995.24Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDAKPKA++PAEKPPKFYPA DVKKP+VNKRK KPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKF DKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQ KKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

XP_004150161.2 60S ribosomal protein L6-1 [Cucumis sativus]6.21e-15297.4Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDAKPKADSPAEKPPKFYPA DVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKEEKSALPQ KKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

XP_008460790.1 PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo]5.79e-157100Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

XP_022935449.1 60S ribosomal protein L6-1-like [Cucurbita moschata]3.44e-14995.24Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDA+PK D+PAEKPPKFYPA DVKKPLVNKRK KPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKF DKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQ KKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

XP_038880885.1 60S ribosomal protein L6-1-like [Benincasa hispida]1.03e-15096.54Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDAKPKAD+PAEKPPKFYPA DVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL
        KGKRVVFLKQL SGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKF DKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQ KKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAV+DLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

TrEMBL top hitse value%identityAlignment
A0A0A0KYA4 60S ribosomal protein L61.4e-11797.4Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDAKPKADSPAEKPPKFYPA DVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKEEKSALPQ KKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

A0A0A0L9J7 60S ribosomal protein L62.9e-11595.24Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDAKPKA++PAEKPPKFYPA DVKKP+VNKRK KPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKF DKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQ KKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

A0A1S3CD97 60S ribosomal protein L62.1e-121100Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

A0A5D3BPH9 60S ribosomal protein L62.1e-121100Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

A0A6J1F5G0 60S ribosomal protein L61.7e-11595.24Show/hide
Query:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF
        MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDA+PK D+PAEKPPKFYPA DVKKPLVNKRK KPTKLRSSITPGTVLIILTGRF
Subjt:  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL
        KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKF DKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQ KKDDQKAVDSAL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSAL

Query:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF
        LKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Subjt:  LKSIEAVSDLKTYLAARFSLKAGMKPHELVF

SwissProt top hitse value%identityAlignment
P21533 60S ribosomal protein L69.4e-4749Show/hide
Query:  SRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADS--------------------PAEKPPKFYPAVDVKKPLVNKRKPKP-----TKL
        SRNP L+RG+G+YSRS MY ++ L+  K K      + + K K +                        K P++YP  DV + L++  K KP      +L
Subjt:  SRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADS--------------------PAEKPPKFYPAVDVKKPLVNKRKPKP-----TKL

Query:  RSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEK-FHDKYFSKEVQKKKKKGEGEFFEAEKEEK
        RSSITPGTVLIILTGR +GKRVVFLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTKVDI+ V + K   D YF K+  +K +  EGE F+ EK EK
Subjt:  RSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEK-FHDKYFSKEVQKKKKKGEGEFFEAEKEEK

Query:  SALPQVKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
          + + +K DQKAVDS +L  I+AV  L+ YL ++FSL  GM PH+LVF
Subjt:  SALPQVKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

P34091 60S ribosomal protein L69.6e-10083.04Show/hide
Query:  VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVF
        VSRNPEL+RG+GKYSRSKMYHKRGLWAIKAKNGG+FP+H  K       EKPPKFYPA DVKKPL+NKRKPKPTKLR+SITPGTVLIIL GRFKGKRVVF
Subjt:  VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVF

Query:  LKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALLKSIEAV
        LKQL SGLLLVTGPFKVNGVPLRRVNQ+YVIATSTKVDI+GVNVEKF DKYF K+ +KK KKGEGEFFEAEK+E + LPQ KKDDQKAVD ALLK+IE V
Subjt:  LKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALLKSIEAV

Query:  SDLKTYLAARFSLKAGMKPHELVF
         +LK YL ARFSLKAGMKPHELVF
Subjt:  SDLKTYLAARFSLKAGMKPHELVF

Q9C9C5 60S ribosomal protein L6-33.9e-10181.58Show/hide
Query:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK
        +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGG+FPRHDAK K D+P EKPPKFYPA DVKKPL N+R  KPTKLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALLKS
        RVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K  +KKKKK EGEFFEAEKEEK  +PQVKKDDQKAVD+AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALLKS

Query:  IEAVSDLKTYLAARFSLKAGMKPHELVF
        IEAV +LKTYL ARFSLK GMKPHELVF
Subjt:  IEAVSDLKTYLAARFSLKAGMKPHELVF

Q9C9C6 60S ribosomal protein L6-22.5e-10081.14Show/hide
Query:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK
        +TA+V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGG+FPRHDAK K D+P EKPPKFYPA DVKKPL N+R  KP KLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALLKS
        RVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K  +KKKKK EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALLKS

Query:  IEAVSDLKTYLAARFSLKAGMKPHELVF
        IEAV +LKTYL ARFSLK GMKPHELVF
Subjt:  IEAVSDLKTYLAARFSLKAGMKPHELVF

Q9FZ76 60S ribosomal protein L6-12.3e-10180.43Show/hide
Query:  APKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFK
        A +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGG+FPRHDA+PK D+P EKP KFYPA DVKKPLVN+RKPKPTKL++SITPGTVLIIL GRFK
Subjt:  APKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFK

Query:  GKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALL
        GKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKF DKYF K  +KKKKK EGEFFEAEKEEK  +PQ KK+DQK VD+AL+
Subjt:  GKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALL

Query:  KSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KSIEAV +LK YL ARFSL  GMKPHELVF
Subjt:  KSIEAVSDLKTYLAARFSLKAGMKPHELVF

Arabidopsis top hitse value%identityAlignment
AT1G18540.1 Ribosomal protein L6 family protein1.6e-10280.43Show/hide
Query:  APKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFK
        A +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGG+FPRHDA+PK D+P EKP KFYPA DVKKPLVN+RKPKPTKL++SITPGTVLIIL GRFK
Subjt:  APKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFK

Query:  GKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALL
        GKRVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKF DKYF K  +KKKKK EGEFFEAEKEEK  +PQ KK+DQK VD+AL+
Subjt:  GKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALL

Query:  KSIEAVSDLKTYLAARFSLKAGMKPHELVF
        KSIEAV +LK YL ARFSL  GMKPHELVF
Subjt:  KSIEAVSDLKTYLAARFSLKAGMKPHELVF

AT1G74050.1 Ribosomal protein L6 family protein2.8e-10281.58Show/hide
Query:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK
        +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGG+FPRHDAK K D+P EKPPKFYPA DVKKPL N+R  KPTKLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALLKS
        RVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K  +KKKKK EGEFFEAEKEEK  +PQVKKDDQKAVD+AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALLKS

Query:  IEAVSDLKTYLAARFSLKAGMKPHELVF
        IEAV +LKTYL ARFSLK GMKPHELVF
Subjt:  IEAVSDLKTYLAARFSLKAGMKPHELVF

AT1G74060.1 Ribosomal protein L6 family protein1.8e-10181.14Show/hide
Query:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK
        +TA+V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGG+FPRHDAK K D+P EKPPKFYPA DVKKPL N+R  KP KLR+SITPGTVLIIL GRFKGK
Subjt:  KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALLKS
        RVVFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K  +KKKKK EGEFFEAEKEEK  +PQ KKDDQKAVD+AL+K+
Subjt:  RVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALLKS

Query:  IEAVSDLKTYLAARFSLKAGMKPHELVF
        IEAV +LKTYL ARFSLK GMKPHELVF
Subjt:  IEAVSDLKTYLAARFSLKAGMKPHELVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACTCATTCGAGGGGTTGGCAAATACTCGAGGTCAAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGC
CAAAAATGGAGGTATCTTCCCTCGCCATGATGCCAAGCCTAAGGCAGATTCTCCAGCTGAGAAGCCACCCAAATTTTACCCTGCCGTTGATGTCAAGAAACCACTTGTTA
ACAAGCGCAAACCCAAGCCCACCAAACTTAGGTCCAGCATTACTCCTGGAACCGTGCTGATCATTCTTACTGGAAGGTTTAAGGGAAAGAGAGTTGTGTTCTTGAAGCAA
CTTCCATCTGGGCTGCTTTTAGTGACTGGGCCATTCAAGGTCAATGGTGTTCCATTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTGC
AGGAGTCAATGTGGAGAAATTTCATGACAAATATTTCTCCAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAAGTG
CACTCCCACAGGTGAAAAAGGATGATCAAAAGGCCGTGGACTCAGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTAAAGACATACTTAGCTGCAAGGTTTTCTCTA
AAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAG
mRNA sequenceShow/hide mRNA sequence
CCACCAGTATCTCTGAAACAAACAGTGTCTGAAAGTTCACGAAAATTGACCTGAAATAAACTGGGCCTTAAAAGTATTATGGGGCCTATAGACACCTAAAATTTAATAAT
TTTCCCTCTAGGGCTTTTGGCGAGCAGAGGAACGAAGACTTCCGGTGCCAAATTCTCAGAGGTTCATCAATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACT
CATTCGAGGGGTTGGCAAATACTCGAGGTCAAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTATCTTCCCTCGCCATGATGCCAAGCCTA
AGGCAGATTCTCCAGCTGAGAAGCCACCCAAATTTTACCCTGCCGTTGATGTCAAGAAACCACTTGTTAACAAGCGCAAACCCAAGCCCACCAAACTTAGGTCCAGCATT
ACTCCTGGAACCGTGCTGATCATTCTTACTGGAAGGTTTAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGCTGCTTTTAGTGACTGGGCCATTCAAGGT
CAATGGTGTTCCATTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTGCAGGAGTCAATGTGGAGAAATTTCATGACAAATATTTCTCCA
AGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAAGTGCACTCCCACAGGTGAAAAAGGATGATCAAAAGGCCGTGGAC
TCAGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTAAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAGATATT
TTCTGTTTGGTTTCTGATACTTCTCTTGTGGAATTTGATCCCTATAATCTTCTTGTTCATGTTTTGTTATGAGGGTTGTAGATTTGAATTATGTCTCGCAATGAATTTTG
TAGTGAAGTTTATTCATCAAATCCTGCTTTACATGGCTTCCTTTGACTAGTGATAGTGATAAGACATGTAATTTTTGTTCAGTTTCTGGCGTGAAATACTTGAGAAACAC
ATTGATCAAG
Protein sequenceShow/hide protein sequence
MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPPKFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQ
LPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQVKKDDQKAVDSALLKSIEAVSDLKTYLAARFSL
KAGMKPHELVF