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IVF0008875 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008875
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposase
Genome locationchr07:19262177..19262799
RNA-Seq ExpressionIVF0008875
SyntenyIVF0008875
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044982.1 transposase [Cucumis melo var. makuwa]1.11e-5886.67Show/hide
Query:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFTKTFINVGSNELTEHEGFDMSDGNEF
        MA LSRALNHVWTKEEEDTL+ECLVELVSI DGNLI+     SHPA  GLL+KPFFYYD+LVYMFGRDRATDRFTKTFI+VGSNELTEHEGFDMSDGNEF
Subjt:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFTKTFINVGSNELTEHEGFDMSDGNEF

Query:  PSVYS
        PSVYS
Subjt:  PSVYS

KAA0054470.1 retrotransposon protein [Cucumis melo var. makuwa]3.83e-3656.49Show/hide
Query:  MAILSRALNHVWTKEEEDTLLECLVELVSI-------------------------EDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFT
        MA  S A  HVWTKEEEDTL+ECLVELVS                          +DG  II    +SHPA K LL+KPF YYDEL Y+F  +RATDRFT
Subjt:  MAILSRALNHVWTKEEEDTLLECLVELVSI-------------------------EDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFT

Query:  KTFINVGSNELTEHEGFDMSDGNE-FPSVYS
        KTF++VGSN+ TE+EGFDMSDG E FPS+YS
Subjt:  KTFINVGSNELTEHEGFDMSDGNE-FPSVYS

KAA0055383.1 retrotransposon protein [Cucumis melo var. makuwa]1.14e-3452.63Show/hide
Query:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQ--------------------------SHPATKGLLHKPFFYYDELVYMFGRDRATDRF
        M+  +R L HVWTKEE++TL+ECL+ELVS+ DGN I+V S Q                          SHP  KGLL+KPF YYDEL Y+FGRDRAT+RF
Subjt:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQ--------------------------SHPATKGLLHKPFFYYDELVYMFGRDRATDRF

Query:  TKTFINVGSNELTE-HEGFDMSDGNE-FPSVYS
         +TF +VGSNE +  ++ FDM DGNE FP VYS
Subjt:  TKTFINVGSNELTE-HEGFDMSDGNE-FPSVYS

TYK00096.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]5.98e-3360.75Show/hide
Query:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFTKTFINVGSNELTEHEGFDMSDGNE-
        MA  SRA  HVW KE+EDTL+ECLVEL               SH ATK LL+KPF+YYDEL Y+F RDRAT RF +TF+++GSNE  E+EGFDMSDGN+ 
Subjt:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFTKTFINVGSNELTEHEGFDMSDGNE-

Query:  -FPSVYS
         FPS+YS
Subjt:  -FPSVYS

TYK16489.1 transposase [Cucumis melo var. makuwa]6.92e-72100Show/hide
Query:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFTKTFINVGSNELTEHEGFDMSDGNEF
        MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFTKTFINVGSNELTEHEGFDMSDGNEF
Subjt:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFTKTFINVGSNELTEHEGFDMSDGNEF

Query:  PSVYS
        PSVYS
Subjt:  PSVYS

TrEMBL top hitse value%identityAlignment
A0A5A7TNP3 Transposase7.9e-4486.67Show/hide
Query:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFTKTFINVGSNELTEHEGFDMSDGNEF
        MA LSRALNHVWTKEEEDTL+ECLVELVSI DGNLI+     SHPA  GLL+KPFFYYD+LVYMFGRDRATDRFTKTFI+VGSNELTEHEGFDMSDGNEF
Subjt:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFTKTFINVGSNELTEHEGFDMSDGNEF

Query:  PSVYS
        PSVYS
Subjt:  PSVYS

A0A5A7UGT2 Retrotransposon protein3.0e-2756.49Show/hide
Query:  MAILSRALNHVWTKEEEDTLLECLVELVSI-------------------------EDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFT
        MA  S A  HVWTKEEEDTL+ECLVELVS                          +DG  II    +SHPA K LL+KPF YYDEL Y+F  +RATDRFT
Subjt:  MAILSRALNHVWTKEEEDTLLECLVELVSI-------------------------EDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFT

Query:  KTFINVGSNELTEHEGFDMSDG-NEFPSVYS
        KTF++VGSN+ TE+EGFDMSDG  EFPS+YS
Subjt:  KTFINVGSNELTEHEGFDMSDG-NEFPSVYS

A0A5A7UHG9 Retrotransposon protein5.1e-2752.63Show/hide
Query:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQ--------------------------SHPATKGLLHKPFFYYDELVYMFGRDRATDRF
        M+  +R L HVWTKEE++TL+ECL+ELVS+ DGN I+V S Q                          SHP  KGLL+KPF YYDEL Y+FGRDRAT+RF
Subjt:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQ--------------------------SHPATKGLLHKPFFYYDELVYMFGRDRATDRF

Query:  TKTFINVGSNELT-EHEGFDMSDGNE-FPSVYS
         +TF +VGSNE +  ++ FDM DGNE FP VYS
Subjt:  TKTFINVGSNELT-EHEGFDMSDGNE-FPSVYS

A0A5D3BP98 Putative nuclease HARBI15.7e-2660.75Show/hide
Query:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFTKTFINVGSNELTEHEGFDMSDGNE-
        MA  SRA  HVW KE+EDTL+ECLVEL               SH ATK LL+KPF+YYDEL Y+F RDRAT RF +TF+++GSNE  E+EGFDMSDGN+ 
Subjt:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFTKTFINVGSNELTEHEGFDMSDGNE-

Query:  -FPSVYS
         FPS+YS
Subjt:  -FPSVYS

A0A5D3D1Y9 Transposase6.4e-54100Show/hide
Query:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFTKTFINVGSNELTEHEGFDMSDGNEF
        MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFTKTFINVGSNELTEHEGFDMSDGNEF
Subjt:  MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFTKTFINVGSNELTEHEGFDMSDGNEF

Query:  PSVYS
        PSVYS
Subjt:  PSVYS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATCTTGTCCCGTGCCCTGAACCATGTATGGACTAAGGAGGAGGAGGACACTCTTTTAGAGTGTTTAGTGGAGTTGGTGTCCATTGAGGATGGAAATTTGATAAT
AGTACATTCCGGCCAGTCGCATCCTGCAACGAAGGGGCTCCTTCACAAGCCATTTTTCTATTACGATGAACTTGTATATATGTTTGGACGCGATAGGGCGACGGATCGCT
TTACTAAGACATTCATCAACGTTGGTTCTAACGAACTTACCGAGCATGAGGGGTTTGACATGTCGGACGGGAATGAGTTTCCATCCGTATACAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAATCTTGTCCCGTGCCCTGAACCATGTATGGACTAAGGAGGAGGAGGACACTCTTTTAGAGTGTTTAGTGGAGTTGGTGTCCATTGAGGATGGAAATTTGATAAT
AGTACATTCCGGCCAGTCGCATCCTGCAACGAAGGGGCTCCTTCACAAGCCATTTTTCTATTACGATGAACTTGTATATATGTTTGGACGCGATAGGGCGACGGATCGCT
TTACTAAGACATTCATCAACGTTGGTTCTAACGAACTTACCGAGCATGAGGGGTTTGACATGTCGGACGGGAATGAGTTTCCATCCGTATACAGCTAG
Protein sequenceShow/hide protein sequence
MAILSRALNHVWTKEEEDTLLECLVELVSIEDGNLIIVHSGQSHPATKGLLHKPFFYYDELVYMFGRDRATDRFTKTFINVGSNELTEHEGFDMSDGNEFPSVYS