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IVF0008939 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008939
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pro-like protein
Genome locationchr11:1615365..1616395
RNA-Seq ExpressionIVF0008939
SyntenyIVF0008939
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045606.1 Gag-pro-like protein [Cucumis melo var. makuwa]3.11e-163100Show/hide
Query:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP
        MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP
Subjt:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP

Query:  YLLQLLKVVHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSASTNFSDVITI
        YLLQLLKVVHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSASTNFSDVITI
Subjt:  YLLQLLKVVHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSASTNFSDVITI

Query:  EERIEFGVKNGKIIDSSSERRRMMTSKKKWEKYTS
        EERIEFGVKNGKIIDSSSERRRMMTSKKKWEKYTS
Subjt:  EERIEFGVKNGKIIDSSSERRRMMTSKKKWEKYTS

KAA0049672.1 uncharacterized protein E6C27_scaffold76G00070 [Cucumis melo var. makuwa]7.42e-10161.54Show/hide
Query:  VCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDPYLLQLLKV---
        V QDVEGL+DQL KILELLTTGRGK+V GTSSQVEVDLNQVLEDM AY  GFTPQRSSSPRMVDRTYPTSFP  NPNTTTQQA +VS+P    + K    
Subjt:  VCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDPYLLQLLKV---

Query:  ---------------------------------------------------------------VHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVE
                                                                       VH WKDLA+SF K+YKYNIDMAPDRLDL+RMEKKNVE
Subjt:  ---------------------------------------------------------------VHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVE

Query:  NFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSASTNFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKKWE
         FKEYAQRWR+L  ++QPPLTDKEL AMFINT+RAPYYD MVGSASTNF DVITI ERI+FGVKNG+I+D +SE RRMMT KKK E
Subjt:  NFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSASTNFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKKWE

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]5.58e-10057.27Show/hide
Query:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP
        MDEQTNDQVQAV QDVEGL+DQL KILELLTTGRGK+VAGTSSQVEVDLNQVLEDM AY PGFTPQRSSSPRM DRTYPTSFP PNPNTTTQQ  + ++P
Subjt:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP

Query:  -----------------------YLLQLLKV---------------------------------------------------------------------
                               +L + L+V                                                                     
Subjt:  -----------------------YLLQLLKV---------------------------------------------------------------------

Query:  ----------------VHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSAST
                        VHRWKDLA+SFLKQYKYNIDMAPDRLDLQRMEKKNVE FKEYAQRWR+LA QVQPP TDKEL AMFINT+RAPYYD MVGSAST
Subjt:  ----------------VHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSAST

Query:  NFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKK
        NFSDVITI ERIEFGVKN +I D +SE RR+MT KKK
Subjt:  NFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKK

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]9.33e-10057.57Show/hide
Query:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP
        MDEQTNDQVQAV QDVEGL+DQL KILELLTTGRGK+V GTSSQVEVDLNQVLEDM  Y PGFTPQRSSSPRM DRTYPTSFP PNPNTTTQQA + ++P
Subjt:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP

Query:  -----------------------YLLQLLKV---------------------------------------------------------------------
                               +L + L+V                                                                     
Subjt:  -----------------------YLLQLLKV---------------------------------------------------------------------

Query:  ----------------VHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSAST
                        VHRWKDLA+SFLKQYKYNIDMAPDRLDLQRMEKKNVE FKEYAQRWR+LA QVQPPLTDKEL AMFINT+RAPYYD MVGSAST
Subjt:  ----------------VHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSAST

Query:  NFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKK
        NFSDVITI ERIEFGVKNG+I D +SE RR+MT KKK
Subjt:  NFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKK

XP_008452348.1 PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo]6.28e-10556.05Show/hide
Query:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP
        MDEQTNDQVQAV QDVEGL+DQL KILELLTTGRGK+VAGTSSQVEVDLNQVLED+ AY P FTPQR SSPRMVDRTYPTSFP PNPNTTTQQA +VSD 
Subjt:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP

Query:  YLLQLLKV--------------------------------------------------------------------------------------------
            + K                                                                                             
Subjt:  YLLQLLKV--------------------------------------------------------------------------------------------

Query:  ----------------VHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSAST
                        VHRW DLA+SFLKQYKYNIDMAPD LDLQRMEK+NVE FKEYAQRWR+L  QVQPPLTDKEL A+FINT+RAPYYD MVGSAST
Subjt:  ----------------VHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSAST

Query:  NFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKKWE
        NFSDVI I ERIEFGVKN +I D SSE RRMMT KKK E
Subjt:  NFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKKWE

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase2.7e-8461.49Show/hide
Query:  QDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP-------------
        QDVEGL+DQL KILELLTTGRGK+V GTSSQVEVDLNQVLEDM AY PGFTPQRSSSPRM DRTYPTSFP PNPNTTTQQ  + ++P             
Subjt:  QDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP-------------

Query:  ----------YLLQLLKV---------------------------------------------------------VHRWKDLANSFLKQYKYNIDMAPDR
                  +L + L+V                                                         VHRWKDLA+SFLKQYKYNIDMAPDR
Subjt:  ----------YLLQLLKV---------------------------------------------------------VHRWKDLANSFLKQYKYNIDMAPDR

Query:  LDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSASTNFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKK
        LDLQRMEKKNVE FKEYAQRWR+LA QVQPPLTDKEL AMFINT+RAPYYD MVGSASTNFSDVITI ERIEFGVKNG+I D +SE RR+MT KKK
Subjt:  LDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSASTNFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKK

A0A5A7V1Y8 Gag-pro-like protein1.0e-8355.88Show/hide
Query:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP
        MDEQTNDQVQAV QDVEGL+DQL KILELLTTGRGK+VAGTSSQVEVDLNQVLED+ AY P FTPQR SSPRMVDRTYPTSFP PNPNTTTQQA +VSD 
Subjt:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP

Query:  YLLQLLK---------------------------------------------------------------------------------------------
            + K                                                                                             
Subjt:  YLLQLLK---------------------------------------------------------------------------------------------

Query:  ---------------VVHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSAST
                        VHRW DLA+SFLKQYKYNIDMAPD LDLQRMEK+NVE FKEYAQRWR+L  QVQPPLTDKEL A+FINT+RAPYYD MVGSAST
Subjt:  ---------------VVHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSAST

Query:  NFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKKWEK
        NFSDVI I ERIEFGVKN +I D SSE RRMMT KKK E+
Subjt:  NFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKKWEK

A0A5A7V681 Retrotrans_gag domain-containing protein3.7e-8657.27Show/hide
Query:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP
        MDEQTNDQVQAV QDVEGL+DQL KILELLTTGRGK+VAGTSSQVEVDLNQVLEDM AY PGFTPQRSSSPRM DRTYPTSFP PNPNTTTQQ  + ++P
Subjt:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP

Query:  -----------------------YLLQLLKV---------------------------------------------------------------------
                               +L + L+V                                                                     
Subjt:  -----------------------YLLQLLKV---------------------------------------------------------------------

Query:  ----------------VHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSAST
                        VHRWKDLA+SFLKQYKYNIDMAPDRLDLQRMEKKNVE FKEYAQRWR+LA QVQPP TDKEL AMFINT+RAPYYD MVGSAST
Subjt:  ----------------VHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSAST

Query:  NFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKK
        NFSDVITI ERIEFGVKN +I D +SE RR+MT KKK
Subjt:  NFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKK

A0A5A7VAU5 Uncharacterized protein2.6e-8757.57Show/hide
Query:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP
        MDEQTNDQVQAV QDVEGL+DQL KILELLTTGRGK+V GTSSQVEVDLNQVLEDM  Y PGFTPQRSSSPRM DRTYPTSFP PNPNTTTQQA + ++P
Subjt:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP

Query:  -----------------------YLLQLLKV---------------------------------------------------------------------
                               +L + L+V                                                                     
Subjt:  -----------------------YLLQLLKV---------------------------------------------------------------------

Query:  ----------------VHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSAST
                        VHRWKDLA+SFLKQYKYNIDMAPDRLDLQRMEKKNVE FKEYAQRWR+LA QVQPPLTDKEL AMFINT+RAPYYD MVGSAST
Subjt:  ----------------VHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSAST

Query:  NFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKK
        NFSDVITI ERIEFGVKNG+I D +SE RR+MT KKK
Subjt:  NFSDVITIEERIEFGVKNGKIIDSSSERRRMMTSKKK

A0A5D3BSD2 Gag-pro-like protein5.7e-127100Show/hide
Query:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP
        MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP
Subjt:  MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDP

Query:  YLLQLLKVVHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSASTNFSDVITI
        YLLQLLKVVHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSASTNFSDVITI
Subjt:  YLLQLLKVVHRWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSASTNFSDVITI

Query:  EERIEFGVKNGKIIDSSSERRRMMTSKKKWEKYTS
        EERIEFGVKNGKIIDSSSERRRMMTSKKKWEKYTS
Subjt:  EERIEFGVKNGKIIDSSSERRRMMTSKKKWEKYTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTTGTCAAGACGTTGAAGGATTGGAGGATCAATTGAAAAAAATCCTAGAATTGCTCACTACTGGAAGAGGAAAGAA
TGTTGCGGGGACTTCATCACAAGTGGAAGTAGATCTGAATCAGGTACTAGAGGACATGTCTGCATACCTTCCGGGTTTCACTCCTCAAAGGTCGTCTAGTCCACGCATGG
TGGATAGGACATATCCTACATCCTTTCCCATGCCAAATCCTAACACAACCACCCAACAGGCAGTCTATGTGAGTGACCCATATCTACTCCAATTACTGAAGGTGGTGCAT
AGGTGGAAGGATCTTGCCAATTCTTTCTTAAAACAATATAAGTACAACATTGATATGGCACCCGACCGTCTGGATCTTCAAAGGATGGAAAAGAAGAATGTTGAAAATTT
TAAGGAGTATGCACAACGATGGAGAGATTTAGCTACACAAGTGCAACCTCCCCTAACCGATAAAGAATTGATAGCCATGTTCATAAACACTATTCGGGCCCCATACTATG
ATATAATGGTTGGAAGTGCTTCGACTAATTTCTCGGACGTCATAACAATTGAGGAGAGAATTGAATTTGGAGTGAAGAATGGAAAGATCATCGATTCTTCTTCAGAGAGA
AGAAGGATGATGACCTCAAAGAAAAAATGGGAGAAGTACACGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTTGTCAAGACGTTGAAGGATTGGAGGATCAATTGAAAAAAATCCTAGAATTGCTCACTACTGGAAGAGGAAAGAA
TGTTGCGGGGACTTCATCACAAGTGGAAGTAGATCTGAATCAGGTACTAGAGGACATGTCTGCATACCTTCCGGGTTTCACTCCTCAAAGGTCGTCTAGTCCACGCATGG
TGGATAGGACATATCCTACATCCTTTCCCATGCCAAATCCTAACACAACCACCCAACAGGCAGTCTATGTGAGTGACCCATATCTACTCCAATTACTGAAGGTGGTGCAT
AGGTGGAAGGATCTTGCCAATTCTTTCTTAAAACAATATAAGTACAACATTGATATGGCACCCGACCGTCTGGATCTTCAAAGGATGGAAAAGAAGAATGTTGAAAATTT
TAAGGAGTATGCACAACGATGGAGAGATTTAGCTACACAAGTGCAACCTCCCCTAACCGATAAAGAATTGATAGCCATGTTCATAAACACTATTCGGGCCCCATACTATG
ATATAATGGTTGGAAGTGCTTCGACTAATTTCTCGGACGTCATAACAATTGAGGAGAGAATTGAATTTGGAGTGAAGAATGGAAAGATCATCGATTCTTCTTCAGAGAGA
AGAAGGATGATGACCTCAAAGAAAAAATGGGAGAAGTACACGAGTTGA
Protein sequenceShow/hide protein sequence
MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYLPGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVYVSDPYLLQLLKVVH
RWKDLANSFLKQYKYNIDMAPDRLDLQRMEKKNVENFKEYAQRWRDLATQVQPPLTDKELIAMFINTIRAPYYDIMVGSASTNFSDVITIEERIEFGVKNGKIIDSSSER
RRMMTSKKKWEKYTS