; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0008982 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0008982
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr12:7106742..7108243
RNA-Seq ExpressionIVF0008982
SyntenyIVF0008982
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR016197 - Chromo-like domain superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026281.1 reverse transcriptase [Cucumis melo var. makuwa]1.44e-17968.23Show/hide
Query:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT
        M EAAVS+G+LGSLIAHFQV+PILIDRIIKAQLDDA +RKLAEEVRQNQRLNYSL+ D A MKYDRLCVPSDQ IK QILKEAHSSAYAMHPGSTK+Y T
Subjt:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT

Query:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGMMAFACAL-QFKGNWDAHLSLM-------------
        LKKHYWW  MK EIADYVAKCLICQQVKPERQRPA LLNPLPVLEWKWEHVTMDFL   P   +G       + + +   D + S               
Subjt:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGMMAFACAL-QFKGNWDAHLSLM-------------

Query:  -EFAYNNSFH------SSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKLN--------LKLVT---VFLKLSPWKGVLRFGRKGKLSPRFIWPYEILE
         +  ++ +FH      S   +   E +   C    + + +V E    G KL         L+      VFLKLSPWKGVLRFG KGKLSPRFI PYEILE
Subjt:  -EFAYNNSFH------SSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKLN--------LKLVT---VFLKLSPWKGVLRFGRKGKLSPRFIWPYEILE

Query:  RIGPVAYRLVLPMELSRIHDVFHVSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPH
        RIGPVA+RL LPMELSRIH++FHVSMLRKYVP+  +ILEAQPVHLKENL YEEEPIQIL KKEQVLRNKVIPLVKVLWRNHNTEEATWETEQA+K QYPH
Subjt:  RIGPVAYRLVLPMELSRIHDVFHVSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPH

Query:  LFTSSP
        LFTSSP
Subjt:  LFTSSP

KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.02e-18977.81Show/hide
Query:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT
        MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT
Subjt:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT

Query:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMG---MMAFACALQFKGNWDAHLSL-----MEFAYNN
        LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVT  F LD   +      + A+   +    + D+  +      ++ A   
Subjt:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMG---MMAFACALQFKGNWDAHLSL-----MEFAYNN

Query:  SFHSSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKLNLKLVTVFLKLSPWKG-VLRFGRKGKLSPRFIWPYEILERIGPVAYRLVLPMELSRIHDVFH
          H S    P +   G+  RT    +++     +  K  ++L    +KL   KG VLRFGRKGKLSPRFIWPYEILERIGPVAYRLVLPMELSRIHDVFH
Subjt:  SFHSSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKLNLKLVTVFLKLSPWKG-VLRFGRKGKLSPRFIWPYEILERIGPVAYRLVLPMELSRIHDVFH

Query:  VSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPHLFTSSP
        VSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPHLFTSSP
Subjt:  VSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPHLFTSSP

KAA0042458.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.62e-17870.4Show/hide
Query:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT
        M EAAVS+GKLGSLI HFQV+PILIDRIIKAQLDDARLRKLAE+VRQNQRLNYSL+ D ALMKYDRLCVPSDQTIKDQIL+EAHSSAY MHPGSTKVY T
Subjt:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT

Query:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGM-MAFACALQFKGNWDAHLSLMEFAYNNSFHSSIG
        LKKH    G      D +AK  + + V            P+ ++  +    T  F   +P+ +  + M  ACALQFKGNWDAHLSLMEFAYNNSFHSSIG
Subjt:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGM-MAFACALQFKGNWDAHLSLMEFAYNNSFHSSIG

Query:  MTPYEALYGRCCRTPVCWDEVGERKLVGPKL------NLKLVT----------------------------VFLKLSPWKGVLRFGRKGKLSPRFIWPYE
        M PYEALYGR CRT VCWDEVGERKLVGP+L      N+K++                             VFLKLSPWKGVLRFGRKGKLSPRFI PYE
Subjt:  MTPYEALYGRCCRTPVCWDEVGERKLVGPKL------NLKLVT----------------------------VFLKLSPWKGVLRFGRKGKLSPRFIWPYE

Query:  ILERIGPVAYRLVLPMELSRIHDVFHVSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQ
        ILERIGPVAYRL LPMELSRIHDVFHVSMLRKYVP+P HILEAQPV LKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWE EQA+K  
Subjt:  ILERIGPVAYRLVLPMELSRIHDVFHVSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQ

Query:  YP
         P
Subjt:  YP

KAA0056222.1 reverse transcriptase [Cucumis melo var. makuwa]4.13e-21669.05Show/hide
Query:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT
        M EAAVSVGKL SL+AHFQV+P LIDRIIKAQLDDARLRKLAEEVRQNQRLNYSL+ D ALMK DRLCVPSDQTIKDQIL+EAHSSAYAMHPGSTKVY T
Subjt:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT

Query:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGM----------------------------------
        LKKHYWW G+KREIADYVAKCLICQQVKPERQRPAGLLNPLPV EWKWEHVTMDF L  P    G                                   
Subjt:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGM----------------------------------

Query:  ---------------------------------MAFACALQFKGNWDAHLSLMEFAYNNSFHSSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKL---
                                         M  ACALQFKGNWDAHLSLMEFAYNNSFHSSIGM  YEALYGRCCRT VCW+EVGERKLVG +L   
Subjt:  ---------------------------------MAFACALQFKGNWDAHLSLMEFAYNNSFHSSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKL---

Query:  ---NLKLVT----------------------------VFLKLSPWKGVLRFGRKGKLSPRFIWPYEILERIGPVAYRLVLPMELSRIHDVFHVSMLRKYV
           N+K++                             VFLKLSPWKGVLRFG+KGKLSPRFI PYEILERIGPV YRL LPMELSRI DVFHVSMLRKYV
Subjt:  ---NLKLVT----------------------------VFLKLSPWKGVLRFGRKGKLSPRFIWPYEILERIGPVAYRLVLPMELSRIHDVFHVSMLRKYV

Query:  PNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPHLFTSSP
        P+P HILEAQPVHLKENLSYEEEPIQILDKKEQV+RNK+IPLVKVLWRNHNTEEATWETEQA+K QYP+LFTSSP
Subjt:  PNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPHLFTSSP

TYK21477.1 reverse transcriptase [Cucumis melo var. makuwa]2.37e-17867.98Show/hide
Query:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT
        M EAAVS+G+LGSLIAHFQV+PILIDRIIKAQLDDA +RKLAEEVRQNQRLNYSL+ D A MKYDRLCVPSDQ IK QILKEAHSSAYAMHPGSTK+Y T
Subjt:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT

Query:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGMMAFACAL-QFKGNWDAHLSLM-------------
        LKKHYWW  MK EIADYVAKCLICQQVKPERQRPA LLNPLPVLEWKWEHVTMDFL   P   +G       + + +   D + S               
Subjt:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGMMAFACAL-QFKGNWDAHLSLM-------------

Query:  -EFAYNNSFH------SSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKLN--------LKLVT---VFLKLSPWKGVLRFGRKGKLSPRFIWPYEILE
         +  ++ +FH      S   +   E +   C    + + +V E    G KL         L+      VFLKLSPWKGVLRFG KGKLSPRFI PYEILE
Subjt:  -EFAYNNSFH------SSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKLN--------LKLVT---VFLKLSPWKGVLRFGRKGKLSPRFIWPYEILE

Query:  RIGPVAYRLVLPMELSRIHDVFHVSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPH
        RIGPVA+RL LPMELSRIH++FHVSMLRKYVP+  +ILEAQPVHLKENL YEEE IQIL KKEQVLRNKVIPLVKVLWRNHNTEEATWETEQA+K QYPH
Subjt:  RIGPVAYRLVLPMELSRIHDVFHVSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPH

Query:  LFTSSP
        LFTSSP
Subjt:  LFTSSP

TrEMBL top hitse value%identityAlignment
A0A5A7SQ03 Reverse transcriptase2.2e-14168.23Show/hide
Query:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT
        M EAAVS+G+LGSLIAHFQV+PILIDRIIKAQLDDA +RKLAEEVRQNQRLNYSL+ D A MKYDRLCVPSDQ IK QILKEAHSSAYAMHPGSTK+Y T
Subjt:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT

Query:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGMMA-FACALQFKGNWDAHLSLM-------------
        LKKHYWW  MK EIADYVAKCLICQQVKPERQRPA LLNPLPVLEWKWEHVTMDFL   P   +G    +    + +   D + S               
Subjt:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGMMA-FACALQFKGNWDAHLSLM-------------

Query:  -EFAYNNSFH------SSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKLN--------LKLVT---VFLKLSPWKGVLRFGRKGKLSPRFIWPYEILE
         +  ++ +FH      S   +   E +   C    + + +V E    G KL         L+      VFLKLSPWKGVLRFG KGKLSPRFI PYEILE
Subjt:  -EFAYNNSFH------SSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKLN--------LKLVT---VFLKLSPWKGVLRFGRKGKLSPRFIWPYEILE

Query:  RIGPVAYRLVLPMELSRIHDVFHVSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPH
        RIGPVA+RL LPMELSRIH++FHVSMLRKYVP+  +ILEAQPVHLKENL YEEEPIQIL KKEQVLRNKVIPLVKVLWRNHNTEEATWETEQA+K QYPH
Subjt:  RIGPVAYRLVLPMELSRIHDVFHVSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPH

Query:  LFTSSP
        LFTSSP
Subjt:  LFTSSP

A0A5A7UK27 Reverse transcriptase3.8e-17369.05Show/hide
Query:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT
        M EAAVSVGKL SL+AHFQV+P LIDRIIKAQLDDARLRKLAEEVRQNQRLNYSL+ D ALMK DRLCVPSDQTIKDQIL+EAHSSAYAMHPGSTKVY T
Subjt:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT

Query:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGM----------------------------------
        LKKHYWW G+KREIADYVAKCLICQQVKPERQRPAGLLNPLPV EWKWEHVTMDF L  P    G                                   
Subjt:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGM----------------------------------

Query:  ---------------------------------MAFACALQFKGNWDAHLSLMEFAYNNSFHSSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKL---
                                         M  ACALQFKGNWDAHLSLMEFAYNNSFHSSIGM  YEALYGRCCRT VCW+EVGERKLVG +L   
Subjt:  ---------------------------------MAFACALQFKGNWDAHLSLMEFAYNNSFHSSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKL---

Query:  ---NLKLV----------------------------TVFLKLSPWKGVLRFGRKGKLSPRFIWPYEILERIGPVAYRLVLPMELSRIHDVFHVSMLRKYV
           N+K++                             VFLKLSPWKGVLRFG+KGKLSPRFI PYEILERIGPV YRL LPMELSRI DVFHVSMLRKYV
Subjt:  ---NLKLV----------------------------TVFLKLSPWKGVLRFGRKGKLSPRFIWPYEILERIGPVAYRLVLPMELSRIHDVFHVSMLRKYV

Query:  PNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPHLFTSSP
        P+P HILEAQPVHLKENLSYEEEPIQILDKKEQV+RNK+IPLVKVLWRNHNTEEATWETEQA+K QYP+LFTSSP
Subjt:  PNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPHLFTSSP

A0A5D3DCU0 Reverse transcriptase1.9e-14067.98Show/hide
Query:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT
        M EAAVS+G+LGSLIAHFQV+PILIDRIIKAQLDDA +RKLAEEVRQNQRLNYSL+ D A MKYDRLCVPSDQ IK QILKEAHSSAYAMHPGSTK+Y T
Subjt:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT

Query:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGMMA-FACALQFKGNWDAHLSLM-------------
        LKKHYWW  MK EIADYVAKCLICQQVKPERQRPA LLNPLPVLEWKWEHVTMDFL   P   +G    +    + +   D + S               
Subjt:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGMMA-FACALQFKGNWDAHLSLM-------------

Query:  -EFAYNNSFH------SSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKLN--------LKLVT---VFLKLSPWKGVLRFGRKGKLSPRFIWPYEILE
         +  ++ +FH      S   +   E +   C    + + +V E    G KL         L+      VFLKLSPWKGVLRFG KGKLSPRFI PYEILE
Subjt:  -EFAYNNSFH------SSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKLN--------LKLVT---VFLKLSPWKGVLRFGRKGKLSPRFIWPYEILE

Query:  RIGPVAYRLVLPMELSRIHDVFHVSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPH
        RIGPVA+RL LPMELSRIH++FHVSMLRKYVP+  +ILEAQPVHLKENL YEEE IQIL KKEQVLRNKVIPLVKVLWRNHNTEEATWETEQA+K QYPH
Subjt:  RIGPVAYRLVLPMELSRIHDVFHVSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPH

Query:  LFTSSP
        LFTSSP
Subjt:  LFTSSP

A0A5D3DES5 DNA/RNA polymerases superfamily protein2.1e-15577.81Show/hide
Query:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT
        MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT
Subjt:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT

Query:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMG---MMAFACALQFKGNWDAHLS-----LMEFAYNN
        LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVT  F LD   +      + A+   +    + D+  +      ++ A   
Subjt:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMG---MMAFACALQFKGNWDAHLS-----LMEFAYNN

Query:  SFHSSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKLNLKLVTVFLKLSPWKG-VLRFGRKGKLSPRFIWPYEILERIGPVAYRLVLPMELSRIHDVFH
          H S    P +   G+  RT    +++     +  K  ++L    +KL   KG VLRFGRKGKLSPRFIWPYEILERIGPVAYRLVLPMELSRIHDVFH
Subjt:  SFHSSIGMTPYEALYGRCCRTPVCWDEVGERKLVGPKLNLKLVTVFLKLSPWKG-VLRFGRKGKLSPRFIWPYEILERIGPVAYRLVLPMELSRIHDVFH

Query:  VSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPHLFTSSP
        VSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPHLFTSSP
Subjt:  VSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPHLFTSSP

A0A5D3DHF7 Putative DNA/RNA polymerases superfamily protein1.4e-14370.4Show/hide
Query:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT
        M EAAVS+GKLGSLI HFQV+PILIDRIIKAQLDDARLRKLAE+VRQNQRLNYSL+ D ALMKYDRLCVPSDQTIKDQIL+EAHSSAY MHPGSTKVY T
Subjt:  MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYIT

Query:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGM-MAFACALQFKGNWDAHLSLMEFAYNNSFHSSIG
        LKKH    G      D +AK  + + V            P+ ++  +    T  F   +P+ +  + M  ACALQFKGNWDAHLSLMEFAYNNSFHSSIG
Subjt:  LKKHYWWLGMKREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGM-MAFACALQFKGNWDAHLSLMEFAYNNSFHSSIG

Query:  MTPYEALYGRCCRTPVCWDEVGERKLVGPKL------NLKLV----------------------------TVFLKLSPWKGVLRFGRKGKLSPRFIWPYE
        M PYEALYGR CRT VCWDEVGERKLVGP+L      N+K++                             VFLKLSPWKGVLRFGRKGKLSPRFI PYE
Subjt:  MTPYEALYGRCCRTPVCWDEVGERKLVGPKL------NLKLV----------------------------TVFLKLSPWKGVLRFGRKGKLSPRFIWPYE

Query:  ILERIGPVAYRLVLPMELSRIHDVFHVSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQ
        ILERIGPVAYRL LPMELSRIHDVFHVSMLRKYVP+P HILEAQPV LKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWE EQA+K  
Subjt:  ILERIGPVAYRLVLPMELSRIHDVFHVSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQ

Query:  YP
         P
Subjt:  YP

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein7.6e-1427.41Show/hide
Query:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYITLKKHYWWLGMKREIADYVAKCLICQ
        ++++    +D +L  L     +    N  LKD + +   D++ +P+D  +   I+K+ H     +HPG   +   + + + W G++++I +YV  C  CQ
Subjt:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYITLKKHYWWLGMKREIADYVAKCLICQ

Query:  QVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYP
          K    +P G L P+P  E  WE ++MDF+   P
Subjt:  QVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYP

P0CT35 Transposon Tf2-2 polyprotein7.6e-1427.41Show/hide
Query:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYITLKKHYWWLGMKREIADYVAKCLICQ
        ++++    +D +L  L     +    N  LKD + +   D++ +P+D  +   I+K+ H     +HPG   +   + + + W G++++I +YV  C  CQ
Subjt:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYITLKKHYWWLGMKREIADYVAKCLICQ

Query:  QVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYP
          K    +P G L P+P  E  WE ++MDF+   P
Subjt:  QVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYP

P0CT36 Transposon Tf2-3 polyprotein7.6e-1427.41Show/hide
Query:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYITLKKHYWWLGMKREIADYVAKCLICQ
        ++++    +D +L  L     +    N  LKD + +   D++ +P+D  +   I+K+ H     +HPG   +   + + + W G++++I +YV  C  CQ
Subjt:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYITLKKHYWWLGMKREIADYVAKCLICQ

Query:  QVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYP
          K    +P G L P+P  E  WE ++MDF+   P
Subjt:  QVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYP

P0CT41 Transposon Tf2-12 polyprotein7.6e-1427.41Show/hide
Query:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYITLKKHYWWLGMKREIADYVAKCLICQ
        ++++    +D +L  L     +    N  LKD + +   D++ +P+D  +   I+K+ H     +HPG   +   + + + W G++++I +YV  C  CQ
Subjt:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYITLKKHYWWLGMKREIADYVAKCLICQ

Query:  QVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYP
          K    +P G L P+P  E  WE ++MDF+   P
Subjt:  QVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYP

Q9UR07 Transposon Tf2-11 polyprotein7.6e-1427.41Show/hide
Query:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYITLKKHYWWLGMKREIADYVAKCLICQ
        ++++    +D +L  L     +    N  LKD + +   D++ +P+D  +   I+K+ H     +HPG   +   + + + W G++++I +YV  C  CQ
Subjt:  DRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYITLKKHYWWLGMKREIADYVAKCLICQ

Query:  QVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYP
          K    +P G L P+P  E  WE ++MDF+   P
Subjt:  QVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAGCCGCTGTGTCTGTAGGTAAGTTGGGAAGTTTAATTGCACATTTCCAAGTGCAACCTATTTTGATAGACCGTATTATTAAAGCCCAGCTAGATGATGCAAG
GTTGAGGAAGTTAGCAGAAGAGGTAAGACAAAACCAAAGATTGAATTATAGCTTGAAGGATGATGTTGCCTTGATGAAATATGATAGGTTGTGTGTACCCAGTGACCAAA
CGATAAAAGATCAAATTTTAAAGGAAGCACATAGTTCTGCATATGCAATGCATCCTGGTAGTACGAAAGTGTATATAACTTTGAAGAAACACTATTGGTGGCTAGGTATG
AAGCGTGAGATTGCAGATTATGTGGCTAAGTGTTTGATATGTCAGCAAGTTAAACCTGAACGTCAGAGACCAGCGGGACTCCTAAATCCTCTTCCAGTACTGGAATGGAA
ATGGGAGCATGTTACCATGGACTTTCTTTTGGACTACCCCACACAACGAATGGGCATGATGGCATTTGCTTGTGCTTTGCAGTTTAAGGGTAATTGGGATGCTCATCTAT
CCTTGATGGAATTTGCATATAATAATAGTTTCCATTCAAGTATTGGAATGACACCATATGAGGCTTTGTATGGTAGATGTTGTAGAACTCCCGTATGCTGGGATGAAGTT
GGAGAAAGGAAGTTAGTGGGGCCAAAATTAAATTTGAAGTTGGTGACAGTCTTTCTAAAGTTATCTCCTTGGAAAGGTGTGCTTCGATTTGGTAGAAAAGGAAAGCTGAG
TCCAAGATTCATTTGGCCTTATGAGATACTAGAACGTATTGGGCCTGTAGCATATCGTTTGGTGTTACCTATGGAACTTTCCAGGATTCATGATGTATTTCATGTGTCAA
TGCTGCGTAAGTACGTCCCAAATCCATATCATATTCTTGAAGCACAACCGGTTCATTTGAAAGAAAACTTGTCCTACGAAGAGGAGCCAATACAAATCCTTGACAAGAAA
GAACAAGTGCTAAGGAACAAAGTGATCCCATTAGTTAAGGTTCTTTGGAGGAACCATAATACTGAAGAAGCAACGTGGGAAACGGAGCAAGCAGTGAAGGTGCAATACCC
ACATCTTTTCACATCATCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAGCCGCTGTGTCTGTAGGTAAGTTGGGAAGTTTAATTGCACATTTCCAAGTGCAACCTATTTTGATAGACCGTATTATTAAAGCCCAGCTAGATGATGCAAG
GTTGAGGAAGTTAGCAGAAGAGGTAAGACAAAACCAAAGATTGAATTATAGCTTGAAGGATGATGTTGCCTTGATGAAATATGATAGGTTGTGTGTACCCAGTGACCAAA
CGATAAAAGATCAAATTTTAAAGGAAGCACATAGTTCTGCATATGCAATGCATCCTGGTAGTACGAAAGTGTATATAACTTTGAAGAAACACTATTGGTGGCTAGGTATG
AAGCGTGAGATTGCAGATTATGTGGCTAAGTGTTTGATATGTCAGCAAGTTAAACCTGAACGTCAGAGACCAGCGGGACTCCTAAATCCTCTTCCAGTACTGGAATGGAA
ATGGGAGCATGTTACCATGGACTTTCTTTTGGACTACCCCACACAACGAATGGGCATGATGGCATTTGCTTGTGCTTTGCAGTTTAAGGGTAATTGGGATGCTCATCTAT
CCTTGATGGAATTTGCATATAATAATAGTTTCCATTCAAGTATTGGAATGACACCATATGAGGCTTTGTATGGTAGATGTTGTAGAACTCCCGTATGCTGGGATGAAGTT
GGAGAAAGGAAGTTAGTGGGGCCAAAATTAAATTTGAAGTTGGTGACAGTCTTTCTAAAGTTATCTCCTTGGAAAGGTGTGCTTCGATTTGGTAGAAAAGGAAAGCTGAG
TCCAAGATTCATTTGGCCTTATGAGATACTAGAACGTATTGGGCCTGTAGCATATCGTTTGGTGTTACCTATGGAACTTTCCAGGATTCATGATGTATTTCATGTGTCAA
TGCTGCGTAAGTACGTCCCAAATCCATATCATATTCTTGAAGCACAACCGGTTCATTTGAAAGAAAACTTGTCCTACGAAGAGGAGCCAATACAAATCCTTGACAAGAAA
GAACAAGTGCTAAGGAACAAAGTGATCCCATTAGTTAAGGTTCTTTGGAGGAACCATAATACTGAAGAAGCAACGTGGGAAACGGAGCAAGCAGTGAAGGTGCAATACCC
ACATCTTTTCACATCATCACCTTGA
Protein sequenceShow/hide protein sequence
MDEAAVSVGKLGSLIAHFQVQPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLKDDVALMKYDRLCVPSDQTIKDQILKEAHSSAYAMHPGSTKVYITLKKHYWWLGM
KREIADYVAKCLICQQVKPERQRPAGLLNPLPVLEWKWEHVTMDFLLDYPTQRMGMMAFACALQFKGNWDAHLSLMEFAYNNSFHSSIGMTPYEALYGRCCRTPVCWDEV
GERKLVGPKLNLKLVTVFLKLSPWKGVLRFGRKGKLSPRFIWPYEILERIGPVAYRLVLPMELSRIHDVFHVSMLRKYVPNPYHILEAQPVHLKENLSYEEEPIQILDKK
EQVLRNKVIPLVKVLWRNHNTEEATWETEQAVKVQYPHLFTSSP